RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 CBR3O75828 277 aa13.78□□□□□ -0.2
PHTF1-205ENST00000393357 NXPH2O95156 264 aa13.78□□□□□ -0.2
PHTF1-205ENST00000393357 DSCR4P56555 118 aaPredicted RBP13.78□□□□□ -0.2
PHTF1-205ENST00000393357 AESQ08117 197 aa13.78□□□□□ -0.2
PHTF1-205ENST00000393357 EDDM3AQ14507 147 aa13.78□□□□□ -0.2
PHTF1-205ENST00000393357 TUSC5Q8IXB3 177 aa13.78□□□□□ -0.2
PHTF1-205ENST00000393357 CPT1CQ8TCG5 803 aa13.78□□□□□ -0.2
PHTF1-205ENST00000393357 MRGPRDQ8TDS7 321 aa13.78□□□□□ -0.2
PHTF1-205ENST00000393357 DCTN5Q9BTE1 182 aa13.78□□□□□ -0.2
PHTF1-205ENST00000393357 FBXL7Q9UJT9 491 aa13.78□□□□□ -0.2
PHTF1-205ENST00000393357 TCFL5Q9UL49 500 aa13.78□□□□□ -0.2
PHTF1-205ENST00000393357 C20orf202A1L168 122 aa13.78□□□□□ -0.2
PHTF1-205ENST00000393357 GGCTO75223 188 aaKnown RBP13.78□□□□□ -0.2
PHTF1-205ENST00000393357 OR5G3P0C626 314 aa13.78□□□□□ -0.2
PHTF1-205ENST00000393357 SUMO1P63165 101 aaKnown RBP13.78□□□□□ -0.2
PHTF1-205ENST00000393357 MRPS11P82912 194 aaKnown RBP13.78□□□□□ -0.2
PHTF1-205ENST00000393357 OR10G8Q8NGN5 311 aa13.78□□□□□ -0.2
PHTF1-205ENST00000393357 APOBEC3DQ96AK3 386 aaPredicted RBP13.78□□□□□ -0.2
PHTF1-205ENST00000393357 PYGO2Q9BRQ0 406 aa13.78□□□□□ -0.2
PHTF1-205ENST00000393357 PSMG3Q9BT73 122 aaPredicted RBP13.78□□□□□ -0.2
PHTF1-205ENST00000393357 C19orf25Q9UFG5 118 aaPredicted RBP13.78□□□□□ -0.2
PHTF1-205ENST00000393357 CELA3AP09093 270 aa13.77□□□□□ -0.2
PHTF1-205ENST00000393357 GABRA2P47869 451 aa13.77□□□□□ -0.2
PHTF1-205ENST00000393357 SOX8P57073 446 aa13.77□□□□□ -0.2
PHTF1-205ENST00000393357 NXPH1P58417 271 aa13.77□□□□□ -0.2
PHTF1-205ENST00000393357 TMEM42Q69YG0 159 aa13.77□□□□□ -0.2
PHTF1-205ENST00000393357 SPINK14Q6IE38 97 aa13.77□□□□□ -0.2
PHTF1-205ENST00000393357 H2BFWTQ7Z2G1 175 aa13.77□□□□□ -0.2
PHTF1-205ENST00000393357 ZC2HC1AQ96GY0 325 aa13.77□□□□□ -0.2
PHTF1-205ENST00000393357 TP53TG3Q9ULZ0 132 aa13.77□□□□□ -0.2
PHTF1-205ENST00000393357 PXMP4Q9Y6I8 212 aa13.77□□□□□ -0.2
PHTF1-205ENST00000393357 P04436 131 aa13.77□□□□□ -0.21
PHTF1-205ENST00000393357 HNRNPA3P51991 378 aaKnown RBP13.77□□□□□ -0.21
PHTF1-205ENST00000393357 TCTAP57738 103 aa13.77□□□□□ -0.21
PHTF1-205ENST00000393357 RAC1P63000 192 aa13.77□□□□□ -0.21
PHTF1-205ENST00000393357 RELQ04864 619 aaPredicted RBP13.77□□□□□ -0.21
PHTF1-205ENST00000393357 SPATA31B1PQ5VZV4 182 aa13.77□□□□□ -0.21
PHTF1-205ENST00000393357 ELOVL5Q9NYP7 299 aa13.77□□□□□ -0.21
PHTF1-205ENST00000393357 TBL2Q9Y4P3 447 aaKnown RBP13.77□□□□□ -0.21
PHTF1-205ENST00000393357 ANKRD30BLA7E2S9 258 aa13.77□□□□□ -0.21
PHTF1-205ENST00000393357 TMEM250H0YL14 139 aa13.77□□□□□ -0.21
PHTF1-205ENST00000393357 TPTE2P1Q5T6R2 138 aa13.77□□□□□ -0.21
PHTF1-205ENST00000393357 CARFQ8N187 725 aa13.77□□□□□ -0.21
PHTF1-205ENST00000393357 ABHD12Q8N2K0 398 aa13.77□□□□□ -0.21
PHTF1-205ENST00000393357 FADS6Q8N9I5 356 aa13.77□□□□□ -0.21
PHTF1-205ENST00000393357 R3HDM4Q96D70 268 aa13.77□□□□□ -0.21
PHTF1-205ENST00000393357 SGK494Q96LW2 274 aa13.77□□□□□ -0.21
PHTF1-205ENST00000393357 RNASE7Q9H1E1 156 aaKnown RBP13.77□□□□□ -0.21
PHTF1-205ENST00000393357 HEYLQ9NQ87 328 aaPredicted RBP13.77□□□□□ -0.21
PHTF1-205ENST00000393357 LRP4O75096 1905 aa13.77□□□□□ -0.21
PHTF1-205ENST00000393357 WNT9BO14905 357 aa13.76□□□□□ -0.21
PHTF1-205ENST00000393357 RCHY1Q96PM5 261 aa13.76□□□□□ -0.21
PHTF1-205ENST00000393357 TMEM147Q9BVK8 224 aa13.76□□□□□ -0.21
PHTF1-205ENST00000393357 HES7Q9BYE0 225 aa13.76□□□□□ -0.21
PHTF1-205ENST00000393357 LIN7CQ9NUP9 197 aaKnown RBP13.76□□□□□ -0.21
PHTF1-205ENST00000393357 ZNF253O75346 499 aa13.76□□□□□ -0.21
PHTF1-205ENST00000393357 IGLV2-14P01704 120 aa13.76□□□□□ -0.21
PHTF1-205ENST00000393357 CTXN2P0C2S0 81 aa13.76□□□□□ -0.21
PHTF1-205ENST00000393357 RAC3P60763 192 aa13.76□□□□□ -0.21
PHTF1-205ENST00000393357 RPL15P61313 204 aaKnown RBP13.76□□□□□ -0.21
PHTF1-205ENST00000393357 ALKBH6Q3KRA9 238 aa13.76□□□□□ -0.21
PHTF1-205ENST00000393357 COA6Q5JTJ3 125 aaKnown RBP13.76□□□□□ -0.21
PHTF1-205ENST00000393357 ASCL4Q6XD76 172 aa13.76□□□□□ -0.21
PHTF1-205ENST00000393357 APH1AQ96BI3 265 aa13.76□□□□□ -0.21
PHTF1-205ENST00000393357 SSBP3Q9BWW4 388 aaPredicted RBP13.76□□□□□ -0.21
PHTF1-205ENST00000393357 PROK2Q9HC23 129 aa13.76□□□□□ -0.21
PHTF1-205ENST00000393357 CFAP47Q6ZTR5 3102 aa13.76□□□□□ -0.21
PHTF1-205ENST00000393357 SMG1Q96Q15 3661 aaKnown RBP13.75□□□□□ -0.21
PHTF1-205ENST00000393357 KIR2DL5BA0A0G2JN68 375 aa13.75□□□□□ -0.21
PHTF1-205ENST00000393357 KIR2DL5BA0A0G2JPC4 375 aa13.75□□□□□ -0.21
PHTF1-205ENST00000393357 FOXH1O75593 365 aa13.75□□□□□ -0.21
PHTF1-205ENST00000393357 KIR2DL5AQ8N109 375 aa13.75□□□□□ -0.21
PHTF1-205ENST00000393357 OR2H2O95918 312 aa13.75□□□□□ -0.21
PHTF1-205ENST00000393357 RAC2P15153 192 aa13.75□□□□□ -0.21
PHTF1-205ENST00000393357 CEACAM8P31997 349 aaPredicted RBP13.75□□□□□ -0.21
PHTF1-205ENST00000393357 SRP14P37108 136 aaKnown RBP13.75□□□□□ -0.21
PHTF1-205ENST00000393357 FBXO46Q6PJ61 603 aaPredicted RBP13.75□□□□□ -0.21
PHTF1-205ENST00000393357 PSG11Q9UQ72 335 aa13.75□□□□□ -0.21
PHTF1-205ENST00000393357 WNT2P09544 360 aa13.75□□□□□ -0.21
PHTF1-205ENST00000393357 GATA2P23769 480 aaPredicted RBP13.75□□□□□ -0.21
PHTF1-205ENST00000393357 TIMP3P35625 211 aa13.75□□□□□ -0.21
PHTF1-205ENST00000393357 LHX2P50458 406 aa13.75□□□□□ -0.21
PHTF1-205ENST00000393357 RPL31P62899 125 aaKnown RBP13.75□□□□□ -0.21
PHTF1-205ENST00000393357 DNLZQ5SXM8 178 aa13.75□□□□□ -0.21
PHTF1-205ENST00000393357 COL5A1-AS1Q5SY13 56 aa13.75□□□□□ -0.21
PHTF1-205ENST00000393357 SAXO1Q8IYX7 474 aa13.75□□□□□ -0.21
PHTF1-205ENST00000393357 LRFN3Q9BTN0 628 aa13.75□□□□□ -0.21
PHTF1-205ENST00000393357 MCRIP2Q9BUT9 160 aaKnown RBP13.75□□□□□ -0.21
PHTF1-205ENST00000393357 IGHV5-10-1A0A0J9YXX1 117 aa13.74□□□□□ -0.21
PHTF1-205ENST00000393357 SYNGR4O95473 234 aa13.74□□□□□ -0.21
PHTF1-205ENST00000393357 OR10J4P0C629 311 aa13.74□□□□□ -0.21
PHTF1-205ENST00000393357 PCBD1P61457 104 aa13.74□□□□□ -0.21
PHTF1-205ENST00000393357 CEACAM21Q3KPI0 293 aa13.74□□□□□ -0.21
PHTF1-205ENST00000393357 Q56UQ5 140 aa13.74□□□□□ -0.21
PHTF1-205ENST00000393357 RABEPKQ7Z6M1 372 aa13.74□□□□□ -0.21
PHTF1-205ENST00000393357 NINJ1Q92982 152 aa13.74□□□□□ -0.21
PHTF1-205ENST00000393357 GNB4Q9HAV0 340 aa13.74□□□□□ -0.21
PHTF1-205ENST00000393357 CLCF1Q9UBD9 225 aa13.74□□□□□ -0.21
PHTF1-205ENST00000393357 MRPS18CQ9Y3D5 142 aaKnown RBP13.74□□□□□ -0.21
PHTF1-205ENST00000393357 SPTBN2O15020 2390 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms