RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 BAXQ07812 192 aa9.38□□□□□ -0.91
SMARCAL1-203ENST00000392128 H2BFWTQ7Z2G1 175 aa9.38□□□□□ -0.91
SMARCAL1-203ENST00000392128 ZNF295-AS1Q8N0V1 137 aa9.38□□□□□ -0.91
SMARCAL1-203ENST00000392128 LINC00311Q8N616 119 aa9.38□□□□□ -0.91
SMARCAL1-203ENST00000392128 TMEM252Q8N6L7 170 aa9.38□□□□□ -0.91
SMARCAL1-203ENST00000392128 UBAC2Q8NBM4 344 aa9.38□□□□□ -0.91
SMARCAL1-203ENST00000392128 OR8B3Q8NGG8 313 aa9.38□□□□□ -0.91
SMARCAL1-203ENST00000392128 R3HDM4Q96D70 268 aa9.38□□□□□ -0.91
SMARCAL1-203ENST00000392128 BSCL2Q96G97 398 aaPredicted RBP9.38□□□□□ -0.91
SMARCAL1-203ENST00000392128 OR8B2Q96RD0 313 aa9.38□□□□□ -0.91
SMARCAL1-203ENST00000392128 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.38□□□□□ -0.91
SMARCAL1-203ENST00000392128 LRBAP50851 2863 aa9.38□□□□□ -0.91
SMARCAL1-203ENST00000392128 FAM90A9PA6NNJ1 464 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 NHLH2Q02577 135 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 ZNF833PQ6ZTB9 187 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 PDZD9Q8IXQ8 264 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 OR4S2Q8NH73 311 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 C8orf46Q8TAG6 207 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 NEIL1Q96FI4 390 aaPredicted RBP9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 SMIM3Q9BZL3 60 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 MED9Q9NWA0 146 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 HSPB7Q9UBY9 170 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 PCP4L1A6NKN8 68 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 LEUTXA8MZ59 168 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 PPIHO43447 177 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 PRB1P04280 392 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 RRASP10301 218 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 TAS2R30P59541 319 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 RPL23AP62750 156 aaKnown RBP9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 TNFRSF9Q07011 255 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 FAM74A1Q5RGS3 127 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 CLEC9AQ6UXN8 241 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 C11orf42Q8N5U0 333 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 ARV1Q9H2C2 271 aa9.37□□□□□ -0.91
SMARCAL1-203ENST00000392128 A0A1W2PPH5 198 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 MED6O75586 246 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 IGHV1-8P0DP01 117 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 NQO2P16083 231 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 EIF5AL1Q6IS14 154 aaKnown RBP9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 FAM71F2Q6NXP2 309 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 ZNF843Q8N446 348 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 ZNF383Q8NA42 475 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 LRRC20Q8TCA0 184 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 SMIM8Q96KF7 97 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 WFDC1Q9HC57 220 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 BORCS7-ASMTA0A0B4J1R7 106 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 TXNL1O43396 289 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 F12P00748 615 aaPredicted RBP9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 RBP4P02753 201 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 CDKN1AP38936 164 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 UBE2KP61086 200 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 AARDQ4LEZ3 155 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 WDR25Q64LD2 544 aaPredicted RBP9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 COMMD7Q86VX2 200 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 TMED6Q8WW62 240 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 CXorf58Q96LI9 332 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 SESN1Q9Y6P5 492 aa9.36□□□□□ -0.91
SMARCAL1-203ENST00000392128 J3QR06 171 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 CT45A6P0DMU7 189 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 CT45A5P0DMU8 189 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 CT45A7P0DMV0 189 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 ERVK-16P61578 105 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 ZNF124Q15973 351 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 OR9G1Q8NH87 305 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 RBKSQ9H477 322 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 ZNRD1Q9P1U0 126 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 KLF2Q9Y5W3 355 aaPredicted RBP9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 FGF16O43320 207 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 ZNF137PP52743 207 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 EFNA4P52798 201 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 PXDC1Q5TGL8 231 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 DHRS7BQ6IAN0 325 aaPredicted RBP9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 STX12Q86Y82 276 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 RNF141Q8WVD5 230 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 CITED4Q96RK1 184 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 GINS3Q9BRX5 216 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 TMEM133Q9H2Q1 129 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 PATZ1Q9HBE1 687 aaKnown RBP9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 PSENENQ9NZ42 101 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 MALRD1Q5VYJ5 2156 aa9.35□□□□□ -0.91
SMARCAL1-203ENST00000392128 PPIAL4CA0A0B4J2A2 164 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 OR9G9P0C7N8 305 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 PPIAL4GP0DN37 164 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 IAPPP10997 89 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 SULT1A1P50225 295 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 ZNF266Q14584 549 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 POU2AF1Q16633 256 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 LY6G5BQ8NDX9 201 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 OR10X1Q8NGY0 326 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 TNFRSF14Q92956 283 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 TMEM186Q96B77 213 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 BARX1Q9HBU1 254 aaPredicted RBP9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 DCHS2Q6V1P9 2916 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 OVOL3O00110 214 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 C1QL1O75973 258 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 CST7O76096 145 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 FAM157CP0CG43 387 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 RNF224P0DH78 156 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 TLE4Q04727 773 aa9.34□□□□□ -0.91
SMARCAL1-203ENST00000392128 RTL8BQ17RB0 113 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms