RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 RBMY1DP0C7P1 496 aaKnown RBP10.7□□□□□ -0.7
CHD3-203ENST00000380358 RBMY1A1P0DJD3 496 aaKnown RBP10.7□□□□□ -0.7
CHD3-203ENST00000380358 RBMY1CP0DJD4 496 aa10.7□□□□□ -0.7
CHD3-203ENST00000380358 CTSSP25774 331 aa10.7□□□□□ -0.7
CHD3-203ENST00000380358 VDAC2P45880 294 aaPredicted RBP10.7□□□□□ -0.7
CHD3-203ENST00000380358 MIOXQ9UGB7 285 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 DTX4Q9Y2E6 619 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 TRIP12Q14669 1992 aaPredicted RBP10.69□□□□□ -0.7
CHD3-203ENST00000380358 PSG9Q00887 426 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 C12orf73Q69YU5 71 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 C9orf40Q8IXQ3 194 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 SEMA5BQ9P283 1151 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 A0A1W2PP11 408 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 C7orf77A4D0Y5 90 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 GZMBP10144 247 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 NFAM1Q8NET5 270 aaPredicted RBP10.69□□□□□ -0.7
CHD3-203ENST00000380358 GP6Q9HCN6 339 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 LINC00862A6NCI5 91 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 CXCL3P19876 107 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 FOXA3P55318 350 aaPredicted RBP10.69□□□□□ -0.7
CHD3-203ENST00000380358 LDLRAD2Q5SZI1 272 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 ZNF645Q8N7E2 425 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 PARD6GQ9BYG4 376 aaPredicted RBP10.69□□□□□ -0.7
CHD3-203ENST00000380358 IGHV3-53P01767 116 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 FAM214BQ7L5A3 538 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 ZNRF1Q8ND25 227 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 COPS9Q8WXC6 57 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 KCNS1Q96KK3 526 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 CST9LQ9H4G1 147 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 NEU3Q9UQ49 428 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 ANKRD20A5PA0PJZ0 165 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 SRIP30626 198 aa10.69□□□□□ -0.7
CHD3-203ENST00000380358 A0A0J9YW62 118 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 VN1R4Q7Z5H5 301 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 FBXL15Q9H469 300 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 CTXND1A0A1B0GTU2 59 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 SCN11AQ9UI33 1791 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 C1QL1O75973 258 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 LINC00305Q7Z4B0 112 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 AHCTF1Q8WYP5 2266 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 C1QTNF9BB2RNN3 333 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 FAM27E3Q08E93 113 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 NPIPB3Q92617 1050 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 OR51M1Q9H341 326 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 DOPEY2Q9Y3R5 2298 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 CD8AP01732 235 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 RPS11P62280 158 aaKnown RBP eCLIP10.68□□□□□ -0.7
CHD3-203ENST00000380358 MZB1Q8WU39 189 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 PI4KAP42356 2102 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 HEATR1Q9H583 2144 aaKnown RBP10.68□□□□□ -0.7
CHD3-203ENST00000380358 CD7P09564 240 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 CGB3P0DN86 165 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 OR10J3Q5JRS4 329 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 COLCA1Q6ZS62 124 aa10.68□□□□□ -0.7
CHD3-203ENST00000380358 SMCHD1A6NHR9 2005 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 ZG16O60844 167 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 CLPSP04118 112 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 C1QL2Q7Z5L3 287 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 FAM169BQ8N8A8 192 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 ANKRD36CQ5JPF3 1778 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 HOXA3O43365 443 aaPredicted RBP10.67□□□□□ -0.7
CHD3-203ENST00000380358 GLIPR1P48060 266 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 ZPLD1Q8TCW7 415 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 CHST5Q9GZS9 411 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 INS-IGF2F8WCM5 200 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 INSP01308 110 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 CISD3P0C7P0 127 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 PPIFP30405 207 aaKnown RBP10.67□□□□□ -0.7
CHD3-203ENST00000380358 XAF1Q6GPH4 301 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 TEX29Q8N6K0 151 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 TXNDC17Q9BRA2 123 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 ZNF430Q9H8G1 570 aaPredicted RBP10.67□□□□□ -0.7
CHD3-203ENST00000380358 RGPD1P0DJD0 1748 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 NPIPB11E5RHQ5 1161 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 SHPRHQ149N8 1683 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 SAMD13Q5VXD3 122 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 C10orf111Q8N326 155 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 SCGB3A1Q96QR1 104 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 RARRES2Q99969 163 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 SF3B5Q9BWJ5 86 aaKnown RBP10.67□□□□□ -0.7
CHD3-203ENST00000380358 EXOGQ9Y2C4 368 aaKnown RBP10.67□□□□□ -0.7
CHD3-203ENST00000380358 TRGC2P03986 189 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 LIPFP07098 398 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 PNRC1Q12796 327 aaPredicted RBP10.67□□□□□ -0.7
CHD3-203ENST00000380358 ZNF48Q96MX3 618 aaPredicted RBP10.67□□□□□ -0.7
CHD3-203ENST00000380358 TRGC1P0CF51 173 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 MC5RP33032 325 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 KLK13Q9UKR3 277 aa10.67□□□□□ -0.7
CHD3-203ENST00000380358 KLF4O43474 513 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 RPL39P5Q59GN2 51 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 RTN4RL2Q86UN3 420 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 SLC17A5Q9NRA2 495 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 MIA3Q5JRA6 1907 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 GGCTO75223 188 aaKnown RBP10.66□□□□□ -0.7
CHD3-203ENST00000380358 CGB7P0DN87 165 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 OR4D11Q8NGI4 311 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 OR51G1Q8NGK1 321 aa10.66□□□□□ -0.7
CHD3-203ENST00000380358 ZNF625Q96I27 306 aaPredicted RBP10.66□□□□□ -0.7
CHD3-203ENST00000380358 COL25A1Q9BXS0 654 aaPredicted RBP10.66□□□□□ -0.7
CHD3-203ENST00000380358 TMEM74BQ9NUR3 256 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms