RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 SLC25A31Q9H0C2 315 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 MAGT1Q9H0U3 335 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 POLDIP2Q9Y2S7 368 aa6.4□□□□□ -1.39
CDKL5-202ENST00000379996 CLN5O75503 358 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 CXCL1P09341 107 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 FABP6P51161 128 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 RAB5BP61020 215 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 CACNA1BQ00975 2339 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 ZNF695Q8IW36 515 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 PSMG3Q9BT73 122 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-202ENST00000379996 PBDC1Q9BVG4 233 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 OR14J1Q9UGF5 321 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 SVILO95425 2214 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 H3BQ15 152 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 ARG1P05089 322 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 SNRNP70P08621 437 aaKnown RBP6.39□□□□□ -1.39
CDKL5-202ENST00000379996 PGA5P0DJD9 388 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 CA6P23280 308 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 MDH2P40926 338 aaKnown RBP6.39□□□□□ -1.39
CDKL5-202ENST00000379996 RND2P52198 227 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 ERVFRD-1P60508 538 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 PAX5Q02548 391 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 MUC15Q8N387 334 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 Q8WTZ3 238 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 NEU4Q8WWR8 484 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-202ENST00000379996 RAB39BQ96DA2 213 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 GNPNAT1Q96EK6 184 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-202ENST00000379996 C20orf24Q9BUV8 137 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 VSIRQ9H7M9 311 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 HIVEP3Q5T1R4 2406 aa6.39□□□□□ -1.39
CDKL5-202ENST00000379996 TRAPPC2LH3BP13 241 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 PLAUP00749 431 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 IGHV2-70P01814 119 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 S100A8P05109 93 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 COX6B1P14854 86 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 VWC2Q2TAL6 325 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 AARDQ4LEZ3 155 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 FAM58AQ8N1B3 248 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 FAM24BQ8N5W8 94 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 DSCAML1Q8TD84 2053 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 A0A1W2PPR1 153 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 CXorf65A6NEN9 183 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 H0YL77 283 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 FBP1P09467 338 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 OR13C7P0DN81 318 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 MSMO1Q15800 293 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 LRRC75BQ2VPJ9 315 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 KHDC3LQ587J8 217 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 TMEM14EPQ6UXP3 125 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 MOB1BQ7L9L4 216 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 SLC35E3Q7Z769 313 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 CYB561D1Q8N8Q1 229 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 OR10V1Q8NGI7 309 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 RBMXL1Q96E39 390 aaKnown RBP6.38□□□□□ -1.39
CDKL5-202ENST00000379996 EIF5A2Q9GZV4 153 aaKnown RBP6.38□□□□□ -1.39
CDKL5-202ENST00000379996 OR51B6Q9H340 312 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 SEPSECSQ9HD40 501 aaKnown RBP6.38□□□□□ -1.39
CDKL5-202ENST00000379996 TMEM242Q9NWH2 141 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 UBE2J1Q9Y385 318 aaPredicted RBP6.38□□□□□ -1.39
CDKL5-202ENST00000379996 MMP24Q9Y5R2 645 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 C1orf196B1AJZ1 125 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 TNFSF12O43508 249 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 CST7O76096 145 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 TNFRSF6BO95407 300 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 TNFRSF1AP19438 455 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 SPIN3Q5JUX0 258 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 TEX36Q5VZQ5 186 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 SCCPDHQ8NBX0 429 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 RAB40CQ96S21 281 aa6.38□□□□□ -1.39
CDKL5-202ENST00000379996 HSPB6O14558 160 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 OR2H2O95918 312 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 IGKV1D-33P01593 117 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 IGKV1-33P01594 117 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 IZUMO4Q1ZYL8 232 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 NEUROG1Q92886 237 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 ZNF251Q9BRH9 671 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 GSN-AS1Q9NRJ2 163 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 EPG5Q9HCE0 2579 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 SRRM5B3KS81 715 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 HOXA5P20719 270 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 GLIPR1P48060 266 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 FABP9Q0Z7S8 132 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 WDR82Q6UXN9 313 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 AGMATQ9BSE5 352 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 HSPB7Q9UBY9 170 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 RALYQ9UKM9 306 aaKnown RBP6.37□□□□□ -1.39
CDKL5-202ENST00000379996 TET2Q6N021 2002 aaPredicted RBP6.37□□□□□ -1.39
CDKL5-202ENST00000379996 AP4M1O00189 453 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 TNFAIP6P98066 277 aaPredicted RBP6.37□□□□□ -1.39
CDKL5-202ENST00000379996 OR10J5Q8NHC4 309 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 GCM1Q9NP62 436 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 SIRT7Q9NRC8 400 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 RPRMQ9NS64 109 aa6.37□□□□□ -1.39
CDKL5-202ENST00000379996 TPRP12270 2363 aaKnown RBP6.37□□□□□ -1.39
CDKL5-202ENST00000379996 PRRC2CQ9Y520 2896 aaKnown RBP6.36□□□□□ -1.39
CDKL5-202ENST00000379996 LINC00587B1AMM8 73 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 FAM90A26D6RGX4 464 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 TNFRSF13BO14836 293 aaPredicted RBP6.36□□□□□ -1.39
CDKL5-202ENST00000379996 OMGP23515 440 aa6.36□□□□□ -1.39
CDKL5-202ENST00000379996 DLK1P80370 383 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms