RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 LY6EQ16553 131 aa6.77□□□□□ -1.33
CKAP2-203ENST00000378037 FFAR4Q5NUL3 377 aa6.77□□□□□ -1.33
CKAP2-203ENST00000378037 ZNF787Q6DD87 383 aa6.77□□□□□ -1.33
CKAP2-203ENST00000378037 SELENOHQ8IZQ5 122 aaKnown RBP6.77□□□□□ -1.33
CKAP2-203ENST00000378037 FAM24BQ8N5W8 94 aa6.77□□□□□ -1.33
CKAP2-203ENST00000378037 EDARADDQ8WWZ3 215 aa6.77□□□□□ -1.33
CKAP2-203ENST00000378037 MED30Q96HR3 178 aa6.77□□□□□ -1.33
CKAP2-203ENST00000378037 OR5B12Q96R08 314 aa6.77□□□□□ -1.33
CKAP2-203ENST00000378037 C19orf12Q9NSK7 152 aa6.77□□□□□ -1.33
CKAP2-203ENST00000378037 NBEAL1Q6ZS30 2694 aa6.77□□□□□ -1.33
CKAP2-203ENST00000378037 MGAM2Q2M2H8 2515 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 APOA2P02652 100 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 PGA5P0DJD9 388 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 CTRB1P17538 263 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 TAGLN2P37802 199 aaKnown RBP6.76□□□□□ -1.33
CKAP2-203ENST00000378037 MZT1Q08AG7 82 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 CTRB2Q6GPI1 263 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 FAM89BQ8N5H3 189 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 COQ2Q96H96 371 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 NRIP2Q9BQI9 281 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 QTRT1Q9BXR0 403 aaKnown RBP6.76□□□□□ -1.33
CKAP2-203ENST00000378037 CELSR1Q9NYQ6 3014 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 OR2A4O95047 310 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 CST4P01036 141 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 RBP4P02753 201 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 NBL1P41271 181 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 IL24Q13007 206 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 MMDQ15546 238 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 GUK1Q16774 197 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 ZNF880Q6PDB4 577 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 SPNS3Q6ZMD2 512 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 OR10W1Q8NGF6 305 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 OR10Z1Q8NGY1 313 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 TMEM171Q8WVE6 324 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 OR2A7Q96R45 310 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 HSD17B10Q99714 261 aaKnown RBP6.76□□□□□ -1.33
CKAP2-203ENST00000378037 TM2D1Q9BX74 207 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 IGKV1D-17A0A075B6S4 117 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 A0A1W2PPE2 198 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 hADV38S2A0JD32 116 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 LINC00473A8K010 186 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 RNASEK-C17orf49H0YIS7 233 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 PEA15Q15121 130 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 CDSNQ15517 529 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 CLLU1Q5K131 121 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 NHLRC2Q8NBF2 726 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 C10orf35Q96D05 121 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 TIMD4Q96H15 378 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 BOD1Q96IK1 185 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 OR4C12Q96R67 309 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 VSIRQ9H7M9 311 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 HEXA-AS1Q9H8Q6 139 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 MED9Q9NWA0 146 aa6.76□□□□□ -1.33
CKAP2-203ENST00000378037 IGHV1-69-2A0A0G2JMI3 117 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 hCG_1809904A0A1W2PP81 198 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 A0A1W2PR64 198 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 RNF212BA8MTL3 300 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 H7C1Q1 480 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 CHRNA7P36544 502 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 HIST2H3PS2Q5TEC6 136 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 OR4A4PQ8NGN8 299 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 TRAF4Q9BUZ4 470 aaPredicted RBP6.75□□□□□ -1.33
CKAP2-203ENST00000378037 GSX1Q9H4S2 264 aaPredicted RBP6.75□□□□□ -1.33
CKAP2-203ENST00000378037 RNF115Q9Y4L5 304 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 INSIG2Q9Y5U4 225 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 SETXQ7Z333 2677 aaKnown RBP6.75□□□□□ -1.33
CKAP2-203ENST00000378037 DBX1A6NMT0 343 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 G3V3Q6 166 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 MGST3O14880 152 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 WNT2P09544 360 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 CCL20P78556 96 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 PJVKQ0ZLH3 352 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 KLF17Q5JT82 389 aaPredicted RBP6.75□□□□□ -1.33
CKAP2-203ENST00000378037 MIC13Q5XKP0 118 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 UNQ6494/PRO21346Q6UXR6 183 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 Q6ZPA2 131 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 TGIF2LXQ8IUE1 241 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 POC1AQ8NBT0 407 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 OR10A7Q8NGE5 316 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 ASCL2Q99929 193 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 SFXN3Q9BWM7 321 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 NKX6-2Q9C056 277 aaPredicted RBP6.75□□□□□ -1.33
CKAP2-203ENST00000378037 PLSCR4Q9NRQ2 329 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.75□□□□□ -1.33
CKAP2-203ENST00000378037 AUP1Q9Y679 476 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 TRIM77I1YAP6 450 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 DEDDO75618 318 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 TCL1AP56279 114 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 SRPXP78539 464 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 HIST2H2BCQ6DN03 193 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 MS4A10Q96PG2 267 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 ZNF251Q9BRH9 671 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 MS4A5Q9H3V2 200 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 WFDC1Q9HC57 220 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 TMEM106BQ9NUM4 274 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 HSF4Q9ULV5 492 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 GAB2Q9UQC2 676 aa6.75□□□□□ -1.33
CKAP2-203ENST00000378037 HMSDA8MTL9 139 aa6.74□□□□□ -1.33
CKAP2-203ENST00000378037 C17orf100A8MU93 164 aa6.74□□□□□ -1.33
CKAP2-203ENST00000378037 IGKV1-16P04430 117 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms