RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 C12orf45Q8N5I9 185 aaPredicted RBP10.44□□□□□ -0.74
CBWD3-203ENST00000377344 OR4S2Q8NH73 311 aa10.44□□□□□ -0.74
CBWD3-203ENST00000377344 CD300LFQ8TDQ1 290 aa10.44□□□□□ -0.74
CBWD3-203ENST00000377344 MITD1Q8WV92 249 aa10.44□□□□□ -0.74
CBWD3-203ENST00000377344 WASHC3Q9Y3C0 194 aa10.44□□□□□ -0.74
CBWD3-203ENST00000377344 CSPG4Q6UVK1 2322 aa10.44□□□□□ -0.74
CBWD3-203ENST00000377344 ACANP16112 2415 aa10.44□□□□□ -0.74
CBWD3-203ENST00000377344 C7orf66A4D0T2 115 aa10.44□□□□□ -0.74
CBWD3-203ENST00000377344 VGLL3A8MV65 326 aa10.44□□□□□ -0.74
CBWD3-203ENST00000377344 FSHBP01225 129 aa10.44□□□□□ -0.74
CBWD3-203ENST00000377344 IGKV1-16P04430 117 aa10.44□□□□□ -0.74
CBWD3-203ENST00000377344 FBP1P09467 338 aa10.44□□□□□ -0.74
CBWD3-203ENST00000377344 FOSL1P15407 271 aa10.44□□□□□ -0.74
CBWD3-203ENST00000377344 HNF1AP20823 631 aa10.44□□□□□ -0.74
CBWD3-203ENST00000377344 SRPXP78539 464 aa10.44□□□□□ -0.74
CBWD3-203ENST00000377344 TAGLNQ01995 201 aaKnown RBP10.44□□□□□ -0.74
CBWD3-203ENST00000377344 ZNF585BQ52M93 769 aa10.44□□□□□ -0.74
CBWD3-203ENST00000377344 TMEM268Q5VZI3 342 aa10.44□□□□□ -0.74
CBWD3-203ENST00000377344 LGI3Q8N145 548 aa10.44□□□□□ -0.74
CBWD3-203ENST00000377344 TCTEX1D1Q8N7M0 179 aa10.44□□□□□ -0.74
CBWD3-203ENST00000377344 S1PR2O95136 353 aa10.43□□□□□ -0.74
CBWD3-203ENST00000377344 RRASP10301 218 aa10.43□□□□□ -0.74
CBWD3-203ENST00000377344 RPA2P15927 270 aa10.43□□□□□ -0.74
CBWD3-203ENST00000377344 RAB13P51153 203 aa10.43□□□□□ -0.74
CBWD3-203ENST00000377344 HES1Q14469 280 aa10.43□□□□□ -0.74
CBWD3-203ENST00000377344 PDPNQ86YL7 162 aa10.43□□□□□ -0.74
CBWD3-203ENST00000377344 BCL6BQ8N143 479 aaPredicted RBP10.43□□□□□ -0.74
CBWD3-203ENST00000377344 RNASE11Q8TAA1 199 aaKnown RBP10.43□□□□□ -0.74
CBWD3-203ENST00000377344 LHFPL5Q8TAF8 219 aa10.43□□□□□ -0.74
CBWD3-203ENST00000377344 FLYWCH2Q96CP2 140 aaKnown RBP10.43□□□□□ -0.74
CBWD3-203ENST00000377344 CDS2O95674 445 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 HPRT1P00492 218 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 HOXB5P09067 269 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 BRS3P32247 399 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 RPS16P62249 146 aaKnown RBP10.42□□□□□ -0.74
CBWD3-203ENST00000377344 HNF4GQ14541 408 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 DHRS7BQ6IAN0 325 aaPredicted RBP10.42□□□□□ -0.74
CBWD3-203ENST00000377344 Q71RC1 249 aaPredicted RBP10.42□□□□□ -0.74
CBWD3-203ENST00000377344 CFHR4Q92496 578 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 RBPMSQ93062 196 aaKnown RBP10.42□□□□□ -0.74
CBWD3-203ENST00000377344 MED28Q9H204 178 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 MDFIC2A0A1B0GVS7 189 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 SHOXO15266 292 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 RBFOX2O43251 390 aaKnown RBP eCLIP10.42□□□□□ -0.74
CBWD3-203ENST00000377344 KRASP01116 189 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 IGKV1D-33P01593 117 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 IGKV1-33P01594 117 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 SNRNP70P08621 437 aaKnown RBP10.42□□□□□ -0.74
CBWD3-203ENST00000377344 CD1BP29016 333 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 G6PCP35575 357 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 AKR1C2P52895 323 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 DEFB112Q30KQ8 113 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 SSX9Q7RTT3 188 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 SELENOHQ8IZQ5 122 aaKnown RBP10.42□□□□□ -0.74
CBWD3-203ENST00000377344 SLC35G3Q8N808 338 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 OR4C13Q8NGP0 309 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 HARBI1Q96MB7 349 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 TMEM56Q96MV1 263 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 PLEKHA2Q9HB19 425 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 FAM212BQ9NTI7 297 aaPredicted RBP10.42□□□□□ -0.74
CBWD3-203ENST00000377344 TMEM56-RWDD3S4R434 201 aa10.42□□□□□ -0.74
CBWD3-203ENST00000377344 FAM25EA8MYX2 175 aa10.41□□□□□ -0.74
CBWD3-203ENST00000377344 GOSR2O14653 212 aa10.41□□□□□ -0.74
CBWD3-203ENST00000377344 ADAP1O75689 374 aa10.41□□□□□ -0.74
CBWD3-203ENST00000377344 VENTXO95231 258 aa10.41□□□□□ -0.74
CBWD3-203ENST00000377344 IGKV1-39P01597 117 aa10.41□□□□□ -0.74
CBWD3-203ENST00000377344 IGKV1D-39P04432 117 aa10.41□□□□□ -0.74
CBWD3-203ENST00000377344 LYZL2Q7Z4W2 148 aa10.41□□□□□ -0.74
CBWD3-203ENST00000377344 VKORC1L1Q8N0U8 176 aa10.41□□□□□ -0.74
CBWD3-203ENST00000377344 DMBX1Q8NFW5 382 aa10.41□□□□□ -0.74
CBWD3-203ENST00000377344 R3HDM4Q96D70 268 aa10.41□□□□□ -0.74
CBWD3-203ENST00000377344 SSX3Q99909 188 aa10.41□□□□□ -0.74
CBWD3-203ENST00000377344 MEGF9Q9H1U4 602 aa10.41□□□□□ -0.74
CBWD3-203ENST00000377344 GSX1Q9H4S2 264 aaPredicted RBP10.41□□□□□ -0.74
CBWD3-203ENST00000377344 TLN2Q9Y4G6 2542 aa10.4□□□□□ -0.74
CBWD3-203ENST00000377344 A0A0B4J2A0 478 aa10.4□□□□□ -0.74
CBWD3-203ENST00000377344 MARCH11A6NNE9 402 aa10.4□□□□□ -0.74
CBWD3-203ENST00000377344 CCSO14618 274 aa10.4□□□□□ -0.74
CBWD3-203ENST00000377344 ATG12O94817 140 aa10.4□□□□□ -0.74
CBWD3-203ENST00000377344 MOSP00540 346 aa10.4□□□□□ -0.74
CBWD3-203ENST00000377344 HRASP01112 189 aa10.4□□□□□ -0.74
CBWD3-203ENST00000377344 FAM106CPP0CH98 169 aa10.4□□□□□ -0.74
CBWD3-203ENST00000377344 NQO2P16083 231 aa10.4□□□□□ -0.74
CBWD3-203ENST00000377344 ERVK-16P61578 105 aa10.4□□□□□ -0.74
CBWD3-203ENST00000377344 HABP2Q14520 560 aaPredicted RBP10.4□□□□□ -0.74
CBWD3-203ENST00000377344 TMEM177Q53S58 311 aa10.4□□□□□ -0.74
CBWD3-203ENST00000377344 C9orf139Q6ZV77 190 aa10.4□□□□□ -0.74
CBWD3-203ENST00000377344 CADM3Q8N126 398 aa10.4□□□□□ -0.74
CBWD3-203ENST00000377344 LRTM2Q8N967 370 aa10.4□□□□□ -0.74
CBWD3-203ENST00000377344 OSR1Q8TAX0 266 aaPredicted RBP10.4□□□□□ -0.74
CBWD3-203ENST00000377344 IL22RA2Q969J5 263 aa10.4□□□□□ -0.74
CBWD3-203ENST00000377344 ZDHHC16Q969W1 377 aa10.4□□□□□ -0.74
CBWD3-203ENST00000377344 RRNAD1Q96FB5 475 aaKnown RBP10.4□□□□□ -0.74
CBWD3-203ENST00000377344 COMMD9Q9P000 198 aa10.4□□□□□ -0.74
CBWD3-203ENST00000377344 SHPKQ9UHJ6 478 aa10.4□□□□□ -0.74
CBWD3-203ENST00000377344 C13orf42A0A1B0GVH6 325 aa10.4□□□□□ -0.75
CBWD3-203ENST00000377344 IFNA21P01568 189 aa10.4□□□□□ -0.75
CBWD3-203ENST00000377344 TMEM11P17152 192 aa10.4□□□□□ -0.75
CBWD3-203ENST00000377344 RRAS2P62070 204 aaPredicted RBP10.4□□□□□ -0.75
CBWD3-203ENST00000377344 C2orf68Q2NKX9 166 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms