RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 PGPA6NDG6 321 aa11.62□□□□□ -0.55
GPC6-201ENST00000377047 IGHV1-2P23083 117 aa11.62□□□□□ -0.55
GPC6-201ENST00000377047 RELQ04864 619 aaPredicted RBP11.62□□□□□ -0.55
GPC6-201ENST00000377047 SPACA3Q8IXA5 215 aa11.62□□□□□ -0.55
GPC6-201ENST00000377047 IGHV3-35A0A0C4DH35 117 aa11.62□□□□□ -0.55
GPC6-201ENST00000377047 TMEM191AQ9H0A3 160 aa11.62□□□□□ -0.55
GPC6-201ENST00000377047 FUT9Q9Y231 359 aa11.62□□□□□ -0.55
GPC6-201ENST00000377047 ARID2Q68CP9 1835 aa11.62□□□□□ -0.55
GPC6-201ENST00000377047 IGHV2OR16-5A0A0B4J2B6 119 aa11.62□□□□□ -0.55
GPC6-201ENST00000377047 PEAR1Q5VY43 1037 aaPredicted RBP11.62□□□□□ -0.55
GPC6-201ENST00000377047 WDYHV1Q96HA8 205 aa11.62□□□□□ -0.55
GPC6-201ENST00000377047 DNAJC13O75165 2243 aa11.62□□□□□ -0.55
GPC6-201ENST00000377047 PSME4Q14997 1843 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 J3QW42 95 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 KLF4O43474 513 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 MPDU1O75352 247 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 IGHV3-23P01764 117 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 TRGV3P03979 118 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 TMEM30BQ3MIR4 351 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 C9orf62Q8N4C0 152 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 VPS25Q9BRG1 176 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 HSPB7Q9UBY9 170 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 TGFAP01135 160 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 RPL29P47914 159 aaKnown RBP11.61□□□□□ -0.55
GPC6-201ENST00000377047 TMEM252Q8N6L7 170 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 IMMP1LQ96LU5 166 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 SLC25A33Q9BSK2 321 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 ELF5Q9UKW6 265 aaPredicted RBP11.61□□□□□ -0.55
GPC6-201ENST00000377047 TNFSF18Q9UNG2 199 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 C19orf54Q5BKX5 351 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 MRPL14Q6P1L8 145 aaKnown RBP11.61□□□□□ -0.55
GPC6-201ENST00000377047 ACP7Q6ZNF0 438 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 TMEM218A2RU14 115 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 ZG16O60844 167 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 IGHV3-48P01763 117 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 COMPP49747 757 aaPredicted RBP11.61□□□□□ -0.55
GPC6-201ENST00000377047 SERF2P84101 59 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 C1orf162Q8NEQ5 155 aaPredicted RBP11.61□□□□□ -0.55
GPC6-201ENST00000377047 GPR132Q9UNW8 380 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 SCN2AQ99250 2005 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 IGKV3-20P01619 116 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 PSG9Q00887 426 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 ANGPTL6Q8NI99 470 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 C7orf69Q9H7B7 122 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 TUBA4BQ9H853 241 aa11.61□□□□□ -0.55
GPC6-201ENST00000377047 NPPCP23582 126 aa11.6□□□□□ -0.55
GPC6-201ENST00000377047 CD81P60033 236 aa11.6□□□□□ -0.55
GPC6-201ENST00000377047 CD300CQ08708 224 aa11.6□□□□□ -0.55
GPC6-201ENST00000377047 RPL39P5Q59GN2 51 aa11.6□□□□□ -0.55
GPC6-201ENST00000377047 FAM53AQ6NSI3 398 aaPredicted RBP11.6□□□□□ -0.55
GPC6-201ENST00000377047 RNASE6Q93091 150 aaKnown RBP11.6□□□□□ -0.55
GPC6-201ENST00000377047 HSPB8Q9UJY1 196 aa11.6□□□□□ -0.55
GPC6-201ENST00000377047 LOC285556D6RIA3 1793 aa11.6□□□□□ -0.55
GPC6-201ENST00000377047 MTCL1Q9Y4B5 1905 aaKnown RBP11.6□□□□□ -0.55
GPC6-201ENST00000377047 H1FOOQ8IZA3 346 aaPredicted RBP11.6□□□□□ -0.55
GPC6-201ENST00000377047 C5orf52A6NGY3 159 aa11.6□□□□□ -0.55
GPC6-201ENST00000377047 HOXA6P31267 233 aa11.6□□□□□ -0.55
GPC6-201ENST00000377047 LINC01590Q5TEZ4 76 aa11.6□□□□□ -0.55
GPC6-201ENST00000377047 ZNF818PQ6ZRF7 136 aa11.6□□□□□ -0.55
GPC6-201ENST00000377047 ALX4Q9H161 411 aaPredicted RBP11.6□□□□□ -0.55
GPC6-201ENST00000377047 HSD17B13Q7Z5P4 300 aaPredicted RBP11.6□□□□□ -0.55
GPC6-201ENST00000377047 TNFRSF9Q07011 255 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 PATJQ8NI35 1801 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 NPIPB13A6NJU9 1138 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 NPIPB4C9JG80 1138 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 P2RY4P51582 365 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 SLC16A13Q7RTY0 426 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 LOC390937A0A1W2PQ73 354 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 H3BTX0 84 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 SNRPD3P62318 126 aaKnown RBP11.59□□□□□ -0.55
GPC6-201ENST00000377047 CX3CL1P78423 397 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 SRSF9Q13242 221 aaKnown RBP eCLIP11.59□□□□□ -0.55
GPC6-201ENST00000377047 FAM216BQ8N7L0 139 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 LYRM2Q9NU23 88 aaPredicted RBP11.59□□□□□ -0.55
GPC6-201ENST00000377047 PHLDA3Q9Y5J5 127 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 A0A1W2PRX2 142 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 GPX1P07203 203 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 CELA3BP08861 270 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 ZNF345Q14585 488 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 PIN1P1O15428 100 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 NDUFB4O95168 129 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 PTBP3O95758 552 aaKnown RBP11.59□□□□□ -0.55
GPC6-201ENST00000377047 IGKV1D-33P01593 117 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 IGKV1-33P01594 117 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 BTF3P20290 206 aaKnown RBP11.59□□□□□ -0.55
GPC6-201ENST00000377047 WDFY1Q8IWB7 410 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 SLC25A38Q96DW6 304 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 DPH3Q96FX2 82 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 DNAJC4Q9NNZ3 241 aa11.59□□□□□ -0.55
GPC6-201ENST00000377047 KLF7O75840 302 aaPredicted RBP11.58□□□□□ -0.55
GPC6-201ENST00000377047 CD59P13987 128 aa11.58□□□□□ -0.55
GPC6-201ENST00000377047 RELBQ01201 579 aa11.58□□□□□ -0.55
GPC6-201ENST00000377047 PRO1933Q9H354 126 aa11.58□□□□□ -0.55
GPC6-201ENST00000377047 TRIOBPQ9H2D6 2365 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 NPIPB6E9PJ23 425 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 BCL2P10415 239 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 DRAM1Q8N682 238 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 OR4C5Q8NGB2 326 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 TCF19Q9Y242 345 aa11.58□□□□□ -0.56
GPC6-201ENST00000377047 SVILO95425 2214 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms