RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 OSTCQ9NRP0 149 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 SH2D7A6NKC9 451 aaPredicted RBP8.77□□□□□ -1
PTCH1-204ENST00000375290 C9JCJ5 164 aa8.77□□□□□ -1
PTCH1-204ENST00000375290 SPINK4O60575 86 aa8.77□□□□□ -1
PTCH1-204ENST00000375290 CCL1P22362 96 aa8.77□□□□□ -1
PTCH1-204ENST00000375290 TTC9CQ8N5M4 171 aa8.77□□□□□ -1
PTCH1-204ENST00000375290 RBPMS2Q6ZRY4 209 aaKnown RBP8.77□□□□□ -1.01
PTCH1-204ENST00000375290 TMEM186Q96B77 213 aa8.77□□□□□ -1.01
PTCH1-204ENST00000375290 ZNF414Q96IQ9 312 aa8.77□□□□□ -1.01
PTCH1-204ENST00000375290 KIR2DL4Q99706 377 aa8.77□□□□□ -1.01
PTCH1-204ENST00000375290 ZXDCQ2QGD7 858 aaPredicted RBP8.77□□□□□ -1.01
PTCH1-204ENST00000375290 C1orf194Q5T5A4 169 aa8.77□□□□□ -1.01
PTCH1-204ENST00000375290 SPANXN1Q5VSR9 72 aa8.77□□□□□ -1.01
PTCH1-204ENST00000375290 MBD3L1Q8WWY6 194 aa8.77□□□□□ -1.01
PTCH1-204ENST00000375290 A0A1W2PQM1 296 aa8.77□□□□□ -1.01
PTCH1-204ENST00000375290 KLK2P20151 261 aa8.77□□□□□ -1.01
PTCH1-204ENST00000375290 KLHDC2Q9Y2U9 406 aa8.77□□□□□ -1.01
PTCH1-204ENST00000375290 TRAV9-2A0A087WT02 112 aa8.77□□□□□ -1.01
PTCH1-204ENST00000375290 ASCL3Q9NQ33 180 aa8.77□□□□□ -1.01
PTCH1-204ENST00000375290 RGP1Q92546 391 aaPredicted RBP8.77□□□□□ -1.01
PTCH1-204ENST00000375290 IZUMO1RA6ND01 250 aa8.77□□□□□ -1.01
PTCH1-204ENST00000375290 NDUFS8O00217 210 aa8.77□□□□□ -1.01
PTCH1-204ENST00000375290 TMEM240Q5SV17 173 aa8.77□□□□□ -1.01
PTCH1-204ENST00000375290 WNT9BO14905 357 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 PPP1CCP36873 323 aaKnown RBP8.76□□□□□ -1.01
PTCH1-204ENST00000375290 LINC00470Q9BZP3 86 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 CDIPTO14735 213 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 C1QL3Q5VWW1 255 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 LCTP09848 1927 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 UNC13CQ8NB66 2214 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 COLCA2A8K830 154 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 ADRA2AP08913 450 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 LYL1P12980 280 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 RUNX1Q01196 453 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 GAB4Q2WGN9 574 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 OR52E5Q8NH55 327 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 CA5BP1Q8WTZ4 195 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 IL11P20809 199 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 CCL20P78556 96 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 TNXAQ16473 311 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 Q5BKY6 102 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 IGHV3-15A0A0B4J1V0 119 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 TNFSF13O75888 250 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 HOXB3P14651 431 aaPredicted RBP8.76□□□□□ -1.01
PTCH1-204ENST00000375290 GAGE1Q13065 139 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 TBR1Q16650 682 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 OR8B2Q96RD0 313 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 CFHR5Q9BXR6 569 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 UFC1Q9Y3C8 167 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 RPL31P62899 125 aaKnown RBP8.76□□□□□ -1.01
PTCH1-204ENST00000375290 FAM89BQ8N5H3 189 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 ZNF703Q9H7S9 590 aaPredicted RBP8.76□□□□□ -1.01
PTCH1-204ENST00000375290 MRPL27Q9P0M9 148 aaKnown RBP8.76□□□□□ -1.01
PTCH1-204ENST00000375290 LHFPL6Q9Y693 200 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 SDK1Q7Z5N4 2213 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 SFTPA2Q8IWL1 248 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 SFTPA1Q8IWL2 248 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 OR52M1Q8NGK5 317 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 AICDAQ9GZX7 198 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 SH3BGRL3Q9H299 93 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 A0A1B0GUT8 65 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 SHISA5Q8N114 240 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 FAM169BQ8N8A8 192 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 PRELID3AQ96N28 172 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 HIST1H2BLQ99880 126 aa8.76□□□□□ -1.01
PTCH1-204ENST00000375290 MRPS18CQ9Y3D5 142 aaKnown RBP8.76□□□□□ -1.01
PTCH1-204ENST00000375290 MPZL1O95297 269 aa8.75□□□□□ -1.01
PTCH1-204ENST00000375290 MLF1P58340 268 aa8.75□□□□□ -1.01
PTCH1-204ENST00000375290 INSIG2Q9Y5U4 225 aa8.75□□□□□ -1.01
PTCH1-204ENST00000375290 H7C1H1 209 aa8.75□□□□□ -1.01
PTCH1-204ENST00000375290 TMEM177Q53S58 311 aa8.75□□□□□ -1.01
PTCH1-204ENST00000375290 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.75□□□□□ -1.01
PTCH1-204ENST00000375290 IL36RNQ9UBH0 155 aa8.75□□□□□ -1.01
PTCH1-204ENST00000375290 A0A1W2PRE2 83 aa8.75□□□□□ -1.01
PTCH1-204ENST00000375290 MPV17P39210 176 aa8.75□□□□□ -1.01
PTCH1-204ENST00000375290 ZNF324O75467 553 aaPredicted RBP8.75□□□□□ -1.01
PTCH1-204ENST00000375290 C1QTNF9P0C862 333 aa8.75□□□□□ -1.01
PTCH1-204ENST00000375290 CTAG1AP78358 180 aa8.75□□□□□ -1.01
PTCH1-204ENST00000375290 DUSP2Q05923 314 aa8.75□□□□□ -1.01
PTCH1-204ENST00000375290 F5H697 171 aa8.75□□□□□ -1.01
PTCH1-204ENST00000375290 C1QL1O75973 258 aa8.75□□□□□ -1.01
PTCH1-204ENST00000375290 LHX8Q68G74 356 aa8.75□□□□□ -1.01
PTCH1-204ENST00000375290 TMEM54Q969K7 222 aa8.75□□□□□ -1.01
PTCH1-204ENST00000375290 LINC00587B1AMM8 73 aa8.75□□□□□ -1.01
PTCH1-204ENST00000375290 FOXS1O43638 330 aa8.75□□□□□ -1.01
PTCH1-204ENST00000375290 LINC00271P0C7V0 271 aa8.75□□□□□ -1.01
PTCH1-204ENST00000375290 ADAMTSL1Q8N6G6 1762 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 MMP23AO75900 390 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 WIPI1Q5MNZ9 446 aaPredicted RBP8.74□□□□□ -1.01
PTCH1-204ENST00000375290 PRSS41Q7RTY9 318 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 MSL2Q9HCI7 577 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 WDR81Q562E7 1941 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 POLR2AP24928 1970 aaKnown RBP8.74□□□□□ -1.01
PTCH1-204ENST00000375290 IGKV1-8A0A0C4DH67 115 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 CSN3P07498 182 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 BOD1L2Q8IYS8 172 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 LHX9Q9NQ69 397 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 ASXL3Q9C0F0 2248 aa8.74□□□□□ -1.01
PTCH1-204ENST00000375290 BRCA1P38398 1863 aaKnown RBP8.74□□□□□ -1.01
PTCH1-204ENST00000375290 OR4C46A6NHA9 309 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms