RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 LINC01551Q86U37 167 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 SDSLQ96GA7 329 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 TMEM68Q96MH6 324 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 OR2D2Q9H210 308 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 HSPB7Q9UBY9 170 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 KNTC1P50748 2209 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 NEURL1O76050 574 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 WNT2P09544 360 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 HNF1AP20823 631 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 LCN2P80188 198 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 C1orf194Q5T5A4 169 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 ATP1A1-AS1Q5TC04 95 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 Q6P435 159 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 BTNL3Q6UXE8 466 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 MOB1BQ7L9L4 216 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 NUFIP2Q7Z417 695 aaKnown RBP9.31□□□□□ -0.92
CCDC40-203ENST00000374877 DTD1Q8TEA8 209 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 TBX15Q96SF7 602 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 FAM173AQ9BQD7 235 aa9.31□□□□□ -0.92
CCDC40-203ENST00000374877 BOKQ9UMX3 212 aaPredicted RBP9.31□□□□□ -0.92
CCDC40-203ENST00000374877 GVINP1Q7Z2Y8 2422 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 GRIFINA4D1Z8 144 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 OR1C1Q15619 314 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 NRN1LQ496H8 165 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 GCSAMLQ5JQS6 135 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 FAM53AQ6NSI3 398 aaPredicted RBP9.3□□□□□ -0.92
CCDC40-203ENST00000374877 SGMS2Q8NHU3 365 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 TMEM45BQ96B21 275 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 POM121L2Q96KW2 1035 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.3□□□□□ -0.92
CCDC40-203ENST00000374877 MPC1Q9Y5U8 109 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 FRYQ5TBA9 3013 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 ZFHX2Q9C0A1 2572 aaPredicted RBP9.3□□□□□ -0.92
CCDC40-203ENST00000374877 TRAV38-1A0A0B4J264 116 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 LRRC30A6NM36 301 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 S1PR2O95136 353 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 GNB1P62873 340 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 ZNF497Q6ZNH5 498 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 MDS2Q8NDY4 140 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 J3QT63 122 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 WT1P19544 449 aaPredicted RBP9.3□□□□□ -0.92
CCDC40-203ENST00000374877 OR10J1P30954 320 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 TDGF1P3P51864 188 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 RPL15P61313 204 aaKnown RBP9.3□□□□□ -0.92
CCDC40-203ENST00000374877 RPL30P62888 115 aaKnown RBP9.3□□□□□ -0.92
CCDC40-203ENST00000374877 FOXC1Q12948 553 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 TOMM20LQ6UXN7 152 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 WDYHV1Q96HA8 205 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 TMEM204Q9BSN7 226 aa9.3□□□□□ -0.92
CCDC40-203ENST00000374877 TNRC6AQ8NDV7 1962 aaKnown RBP9.29□□□□□ -0.92
CCDC40-203ENST00000374877 COX5BP10606 129 aa9.29□□□□□ -0.92
CCDC40-203ENST00000374877 RAC2P15153 192 aa9.29□□□□□ -0.92
CCDC40-203ENST00000374877 GFRA1P56159 465 aa9.29□□□□□ -0.92
CCDC40-203ENST00000374877 SRSF6Q13247 344 aaKnown RBP9.29□□□□□ -0.92
CCDC40-203ENST00000374877 MCEMP1Q8IX19 187 aa9.29□□□□□ -0.92
CCDC40-203ENST00000374877 ZNF114Q8NC26 417 aa9.29□□□□□ -0.92
CCDC40-203ENST00000374877 KLF13Q9Y2Y9 288 aaPredicted RBP9.29□□□□□ -0.92
CCDC40-203ENST00000374877 GTF3C1Q12789 2109 aa9.29□□□□□ -0.92
CCDC40-203ENST00000374877 CUL9Q8IWT3 2517 aa9.29□□□□□ -0.92
CCDC40-203ENST00000374877 C17orf112F2Z3M2 114 aa9.29□□□□□ -0.92
CCDC40-203ENST00000374877 NXPH2O95156 264 aa9.29□□□□□ -0.92
CCDC40-203ENST00000374877 CELA3AP09093 270 aa9.29□□□□□ -0.92
CCDC40-203ENST00000374877 EDDM3BP56851 147 aa9.29□□□□□ -0.92
CCDC40-203ENST00000374877 SPINK14Q6IE38 97 aa9.29□□□□□ -0.92
CCDC40-203ENST00000374877 CMTM2Q8TAZ6 248 aa9.29□□□□□ -0.92
CCDC40-203ENST00000374877 PATZ1Q9HBE1 687 aaKnown RBP9.29□□□□□ -0.92
CCDC40-203ENST00000374877 PXMP4Q9Y6I8 212 aa9.29□□□□□ -0.92
CCDC40-203ENST00000374877 MDFIC2A0A1B0GVS7 189 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 A0A1W2PPV4 95 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 PMS2P5A8MQ11 134 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 MLNRO43193 412 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 CEACAM4O75871 244 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 ADMP35318 185 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 OR3A1P47881 315 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 CEBPDP49716 269 aaPredicted RBP9.28□□□□□ -0.92
CCDC40-203ENST00000374877 IGFL2Q6UWQ7 119 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 LINC00696Q6ZRV3 163 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 OR2M7Q8NG81 312 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 APH1AQ96BI3 265 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 LINC00470Q9BZP3 86 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 PKIBQ9C010 78 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 ZDHHC11Q9H8X9 412 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 B4GALT7Q9UBV7 327 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 AHCTF1Q8WYP5 2266 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 KIR2DL5BA0A0G2JN68 375 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 KIR2DL5BA0A0G2JPC4 375 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 ARR3P36575 388 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 H2BFWTQ7Z2G1 175 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 KIR2DL5AQ8N109 375 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 KCNIP1Q9NZI2 227 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 SSUH2Q9Y2M2 353 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 MSRB2Q9Y3D2 182 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 TMEM210A6NLX4 147 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 A6NNC1 897 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 C17orf98A8MV24 154 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 F6UZH7 168 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 CDIPTO14735 213 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 PDE6DO43924 150 aa9.28□□□□□ -0.92
CCDC40-203ENST00000374877 SS18L1O75177 396 aaPredicted RBP9.28□□□□□ -0.92
CCDC40-203ENST00000374877 HPRT1P00492 218 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms