RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 WDR12Q9GZL7 423 aaKnown RBP11.95□□□□□ -0.5
HSPG2-201ENST00000374673 PRSS22Q9GZN4 317 aa11.95□□□□□ -0.5
HSPG2-201ENST00000374673 ZNF702PQ9H963 129 aa11.95□□□□□ -0.5
HSPG2-201ENST00000374673 LIN7CQ9NUP9 197 aaKnown RBP11.95□□□□□ -0.5
HSPG2-201ENST00000374673 SCP2D1Q9UJQ7 156 aa11.95□□□□□ -0.5
HSPG2-201ENST00000374673 NCBP2LA6PVI3 153 aaKnown RBP11.94□□□□□ -0.5
HSPG2-201ENST00000374673 NBR2O15453 112 aa11.94□□□□□ -0.5
HSPG2-201ENST00000374673 FCGR3BO75015 233 aa11.94□□□□□ -0.5
HSPG2-201ENST00000374673 PGLYRP1O75594 196 aaPredicted RBP11.94□□□□□ -0.5
HSPG2-201ENST00000374673 SPDEFO95238 335 aa11.94□□□□□ -0.5
HSPG2-201ENST00000374673 PGAM2P15259 253 aa11.94□□□□□ -0.5
HSPG2-201ENST00000374673 CNTFRP26992 372 aa11.94□□□□□ -0.5
HSPG2-201ENST00000374673 S100GP29377 79 aa11.94□□□□□ -0.5
HSPG2-201ENST00000374673 KIR2DS2P43631 304 aa11.94□□□□□ -0.5
HSPG2-201ENST00000374673 RND3P61587 244 aa11.94□□□□□ -0.5
HSPG2-201ENST00000374673 BLCAPP62952 87 aa11.94□□□□□ -0.5
HSPG2-201ENST00000374673 FOXL1Q12952 345 aa11.94□□□□□ -0.5
HSPG2-201ENST00000374673 ZNF846Q147U1 533 aa11.94□□□□□ -0.5
HSPG2-201ENST00000374673 IDO2Q6ZQW0 420 aa11.94□□□□□ -0.5
HSPG2-201ENST00000374673 OR13C8Q8NGS7 320 aa11.94□□□□□ -0.5
HSPG2-201ENST00000374673 OR4F5Q8NH21 305 aa11.94□□□□□ -0.5
HSPG2-201ENST00000374673 MCUBQ9NWR8 336 aa11.94□□□□□ -0.5
HSPG2-201ENST00000374673 A0A1B0GUS0 222 aa11.93□□□□□ -0.5
HSPG2-201ENST00000374673 RBFOX2O43251 390 aaKnown RBP eCLIP11.93□□□□□ -0.5
HSPG2-201ENST00000374673 CRYZL1O95825 349 aa11.93□□□□□ -0.5
HSPG2-201ENST00000374673 RLN1P04808 185 aa11.93□□□□□ -0.5
HSPG2-201ENST00000374673 LGALS7P47929 136 aa11.93□□□□□ -0.5
HSPG2-201ENST00000374673 COMPP49747 757 aaPredicted RBP11.93□□□□□ -0.5
HSPG2-201ENST00000374673 BRWD1-AS2P59051 145 aa11.93□□□□□ -0.5
HSPG2-201ENST00000374673 RPS16P62249 146 aaKnown RBP11.93□□□□□ -0.5
HSPG2-201ENST00000374673 ABCA11PQ4W5N1 156 aa11.93□□□□□ -0.5
HSPG2-201ENST00000374673 PHLDA2Q53GA4 152 aa11.93□□□□□ -0.5
HSPG2-201ENST00000374673 OR4S2Q8NH73 311 aa11.93□□□□□ -0.5
HSPG2-201ENST00000374673 OSR1Q8TAX0 266 aaPredicted RBP11.93□□□□□ -0.5
HSPG2-201ENST00000374673 ZFAND1Q8TCF1 268 aa11.93□□□□□ -0.5
HSPG2-201ENST00000374673 MARCH1Q8TCQ1 289 aa11.93□□□□□ -0.5
HSPG2-201ENST00000374673 HARBI1Q96MB7 349 aa11.93□□□□□ -0.5
HSPG2-201ENST00000374673 TSNAXQ99598 290 aaKnown RBP11.93□□□□□ -0.5
HSPG2-201ENST00000374673 SLC2A9Q9NRM0 540 aa11.93□□□□□ -0.5
HSPG2-201ENST00000374673 KIAA1456Q9P272 454 aa11.93□□□□□ -0.5
HSPG2-201ENST00000374673 MMP24Q9Y5R2 645 aa11.93□□□□□ -0.5
HSPG2-201ENST00000374673 NAP1L6A6NFF2 107 aa11.92□□□□□ -0.5
HSPG2-201ENST00000374673 RRHO14718 337 aa11.92□□□□□ -0.5
HSPG2-201ENST00000374673 SHOXO15266 292 aa11.92□□□□□ -0.5
HSPG2-201ENST00000374673 IGLV2-23P01705 113 aa11.92□□□□□ -0.5
HSPG2-201ENST00000374673 CTSDP07339 412 aaPredicted RBP11.92□□□□□ -0.5
HSPG2-201ENST00000374673 OR2B11Q5JQS5 317 aa11.92□□□□□ -0.5
HSPG2-201ENST00000374673 Q6ZS46 218 aa11.92□□□□□ -0.5
HSPG2-201ENST00000374673 SPAG16Q8N0X2 631 aa11.92□□□□□ -0.5
HSPG2-201ENST00000374673 TCTEX1D1Q8N7M0 179 aa11.92□□□□□ -0.5
HSPG2-201ENST00000374673 OR51H1Q8NH63 302 aa11.92□□□□□ -0.5
HSPG2-201ENST00000374673 OR2T6Q8NHC8 308 aa11.92□□□□□ -0.5
HSPG2-201ENST00000374673 LINC01006Q8NI28 216 aa11.92□□□□□ -0.5
HSPG2-201ENST00000374673 MDFIQ99750 246 aa11.92□□□□□ -0.5
HSPG2-201ENST00000374673 RASL11BQ9BPW5 248 aa11.92□□□□□ -0.5
HSPG2-201ENST00000374673 C7orf50Q9BRJ6 194 aaKnown RBP11.92□□□□□ -0.5
HSPG2-201ENST00000374673 BEX1Q9HBH7 125 aa11.92□□□□□ -0.5
HSPG2-201ENST00000374673 GPR132Q9UNW8 380 aa11.92□□□□□ -0.5
HSPG2-201ENST00000374673 CLPSL1A2RUU4 121 aa11.91□□□□□ -0.5
HSPG2-201ENST00000374673 SH2D7A6NKC9 451 aaPredicted RBP11.91□□□□□ -0.5
HSPG2-201ENST00000374673 PEX14O75381 377 aa11.91□□□□□ -0.5
HSPG2-201ENST00000374673 MDKP21741 143 aaPredicted RBP11.91□□□□□ -0.5
HSPG2-201ENST00000374673 F2RP25116 425 aa11.91□□□□□ -0.5
HSPG2-201ENST00000374673 PIGPP57054 158 aa11.91□□□□□ -0.5
HSPG2-201ENST00000374673 PSG5Q15238 335 aa11.91□□□□□ -0.5
HSPG2-201ENST00000374673 C5orf64Q2M2E5 130 aa11.91□□□□□ -0.5
HSPG2-201ENST00000374673 AWAT1Q58HT5 328 aa11.91□□□□□ -0.5
HSPG2-201ENST00000374673 TBC1D26Q86UD7 250 aa11.91□□□□□ -0.5
HSPG2-201ENST00000374673 CCDC71LQ8N9Z2 235 aa11.91□□□□□ -0.5
HSPG2-201ENST00000374673 POC5Q8NA72 575 aa11.91□□□□□ -0.5
HSPG2-201ENST00000374673 CD300LFQ8TDQ1 290 aa11.91□□□□□ -0.5
HSPG2-201ENST00000374673 SCGB3A2Q96PL1 93 aa11.91□□□□□ -0.5
HSPG2-201ENST00000374673 FAM212BQ9NTI7 297 aaPredicted RBP11.91□□□□□ -0.5
HSPG2-201ENST00000374673 SRRM4A7MD48 611 aaKnown RBP11.9□□□□□ -0.5
HSPG2-201ENST00000374673 CENPXA8MT69 81 aa11.9□□□□□ -0.5
HSPG2-201ENST00000374673 MPPED1O15442 326 aa11.9□□□□□ -0.5
HSPG2-201ENST00000374673 RAMP3O60896 148 aa11.9□□□□□ -0.5
HSPG2-201ENST00000374673 HPRT1P00492 218 aa11.9□□□□□ -0.5
HSPG2-201ENST00000374673 IGHG2P01859 326 aa11.9□□□□□ -0.5
HSPG2-201ENST00000374673 HLA-DRB1P01911 266 aa11.9□□□□□ -0.5
HSPG2-201ENST00000374673 PI3P19957 117 aa11.9□□□□□ -0.5
HSPG2-201ENST00000374673 C9orf152Q5JTZ5 239 aa11.9□□□□□ -0.5
HSPG2-201ENST00000374673 RTBDNQ9BSG5 229 aaPredicted RBP11.9□□□□□ -0.5
HSPG2-201ENST00000374673 FBXL15Q9H469 300 aa11.9□□□□□ -0.5
HSPG2-201ENST00000374673 C5orf66Q9H5L9 145 aa11.9□□□□□ -0.5
HSPG2-201ENST00000374673 SERTAD4Q9NUC0 356 aa11.9□□□□□ -0.5
HSPG2-201ENST00000374673 COPZ2Q9P299 210 aa11.9□□□□□ -0.5
HSPG2-201ENST00000374673 METTL1Q9UBP6 276 aaKnown RBP11.9□□□□□ -0.5
HSPG2-201ENST00000374673 C14orf166Q9Y224 244 aaKnown RBP11.9□□□□□ -0.5
HSPG2-201ENST00000374673 PLA2G10O15496 165 aa11.89□□□□□ -0.51
HSPG2-201ENST00000374673 SLC25A17O43808 307 aa11.89□□□□□ -0.51
HSPG2-201ENST00000374673 CRYGBP07316 175 aa11.89□□□□□ -0.51
HSPG2-201ENST00000374673 VSIG10L2P0DP72 767 aa11.89□□□□□ -0.51
HSPG2-201ENST00000374673 UBE2KP61086 200 aa11.89□□□□□ -0.51
HSPG2-201ENST00000374673 VMA21Q3ZAQ7 101 aa11.89□□□□□ -0.51
HSPG2-201ENST00000374673 LIN54Q6MZP7 749 aa11.89□□□□□ -0.51
HSPG2-201ENST00000374673 TEX45Q8NA69 505 aa11.89□□□□□ -0.51
HSPG2-201ENST00000374673 SLC25A21Q9BQT8 299 aaPredicted RBP11.89□□□□□ -0.51
HSPG2-201ENST00000374673 PLEKHA2Q9HB19 425 aa11.89□□□□□ -0.51
HSPG2-201ENST00000374673 COMMD9Q9P000 198 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms