RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.97■□□□□ 0.31
SYNC-201ENST00000373484 IGKV1-27A0A075B6S5 117 aa16.97■□□□□ 0.31
SYNC-201ENST00000373484 CDIPTO14735 213 aa16.97■□□□□ 0.31
SYNC-201ENST00000373484 ARG1P05089 322 aa16.97■□□□□ 0.31
SYNC-201ENST00000373484 FUT3P21217 361 aa16.97■□□□□ 0.31
SYNC-201ENST00000373484 IL2RGP31785 369 aa16.97■□□□□ 0.31
SYNC-201ENST00000373484 PPP1CCP36873 323 aaKnown RBP16.97■□□□□ 0.31
SYNC-201ENST00000373484 PHLDA2Q53GA4 152 aa16.97■□□□□ 0.31
SYNC-201ENST00000373484 FAM201AQ5SY85 155 aa16.97■□□□□ 0.31
SYNC-201ENST00000373484 ZNF729A6NN14 1252 aaPredicted RBP16.96■□□□□ 0.31
SYNC-201ENST00000373484 LHBP01229 141 aa16.96■□□□□ 0.31
SYNC-201ENST00000373484 PPYP01298 95 aa16.96■□□□□ 0.31
SYNC-201ENST00000373484 SRP19P09132 144 aaKnown RBP16.96■□□□□ 0.31
SYNC-201ENST00000373484 ATP6V0CP27449 155 aa16.96■□□□□ 0.31
SYNC-201ENST00000373484 CFHR2P36980 270 aa16.96■□□□□ 0.31
SYNC-201ENST00000373484 MDH2P40926 338 aaKnown RBP16.96■□□□□ 0.31
SYNC-201ENST00000373484 FXYD4P59646 89 aa16.96■□□□□ 0.31
SYNC-201ENST00000373484 KRTAP1-1Q07627 177 aa16.96■□□□□ 0.31
SYNC-201ENST00000373484 TMEM155Q4W5P6 130 aa16.96■□□□□ 0.31
SYNC-201ENST00000373484 GCSAMQ8N6F7 178 aa16.96■□□□□ 0.31
SYNC-201ENST00000373484 C20orf24Q9BUV8 137 aa16.96■□□□□ 0.31
SYNC-201ENST00000373484 CSPG4Q6UVK1 2322 aa16.96■□□□□ 0.31
SYNC-201ENST00000373484 PPIAL4EA0A075B759 164 aa16.96■□□□□ 0.3
SYNC-201ENST00000373484 TRAV20A0A0B4J274 112 aa16.96■□□□□ 0.3
SYNC-201ENST00000373484 PPIAL4DF5H284 164 aa16.96■□□□□ 0.3
SYNC-201ENST00000373484 H3BQ15 152 aa16.96■□□□□ 0.3
SYNC-201ENST00000373484 ANGPTL7O43827 346 aa16.96■□□□□ 0.3
SYNC-201ENST00000373484 ZNF205O95201 554 aa16.96■□□□□ 0.3
SYNC-201ENST00000373484 PPIAL4FP0DN26 164 aa16.96■□□□□ 0.3
SYNC-201ENST00000373484 OR13C7P0DN81 318 aa16.96■□□□□ 0.3
SYNC-201ENST00000373484 LMO4P61968 165 aa16.96■□□□□ 0.3
SYNC-201ENST00000373484 HOXA4Q00056 320 aaPredicted RBP16.96■□□□□ 0.3
SYNC-201ENST00000373484 KIAA0141Q14154 515 aaPredicted RBP16.96■□□□□ 0.3
SYNC-201ENST00000373484 KHDC3LQ587J8 217 aa16.96■□□□□ 0.3
SYNC-201ENST00000373484 LRRC29Q8WV35 223 aa16.96■□□□□ 0.3
SYNC-201ENST00000373484 PPIAL4AQ9Y536 164 aa16.96■□□□□ 0.3
SYNC-201ENST00000373484 DOCK11Q5JSL3 2073 aa16.95■□□□□ 0.3
SYNC-201ENST00000373484 MALRD1Q5VYJ5 2156 aa16.95■□□□□ 0.3
SYNC-201ENST00000373484 TEP1Q99973 2627 aaKnown RBP16.95■□□□□ 0.3
SYNC-201ENST00000373484 HSD17B6O14756 317 aa16.95■□□□□ 0.3
SYNC-201ENST00000373484 GEMIN2O14893 280 aaKnown RBP16.95■□□□□ 0.3
SYNC-201ENST00000373484 TXNL1O43396 289 aa16.95■□□□□ 0.3
SYNC-201ENST00000373484 AADACP22760 399 aa16.95■□□□□ 0.3
SYNC-201ENST00000373484 RBM11P57052 281 aaKnown RBP16.95■□□□□ 0.3
SYNC-201ENST00000373484 OR2B8PP59922 312 aa16.95■□□□□ 0.3
SYNC-201ENST00000373484 CLEC9AQ6UXN8 241 aa16.95■□□□□ 0.3
SYNC-201ENST00000373484 TMEM252Q8N6L7 170 aa16.95■□□□□ 0.3
SYNC-201ENST00000373484 TP53RKQ96S44 253 aa16.95■□□□□ 0.3
SYNC-201ENST00000373484 GGACTQ9BVM4 153 aa16.95■□□□□ 0.3
SYNC-201ENST00000373484 TLN2Q9Y4G6 2542 aa16.94■□□□□ 0.3
SYNC-201ENST00000373484 ELOA3CA0A087WX78 387 aaPredicted RBP16.94■□□□□ 0.3
SYNC-201ENST00000373484 SPRY1O43609 319 aaPredicted RBP16.94■□□□□ 0.3
SYNC-201ENST00000373484 CTXN2P0C2S0 81 aa16.94■□□□□ 0.3
SYNC-201ENST00000373484 IGHV4-31P0DP07 118 aa16.94■□□□□ 0.3
SYNC-201ENST00000373484 ZNF573Q86YE8 665 aa16.94■□□□□ 0.3
SYNC-201ENST00000373484 EDARADDQ8WWZ3 215 aa16.94■□□□□ 0.3
SYNC-201ENST00000373484 TVP23CQ96ET8 276 aa16.94■□□□□ 0.3
SYNC-201ENST00000373484 C1orf159Q96HA4 380 aa16.94■□□□□ 0.3
SYNC-201ENST00000373484 GSX1Q9H4S2 264 aaPredicted RBP16.94■□□□□ 0.3
SYNC-201ENST00000373484 ZNF665Q9H7R5 613 aa16.94■□□□□ 0.3
SYNC-201ENST00000373484 TMEM242Q9NWH2 141 aa16.94■□□□□ 0.3
SYNC-201ENST00000373484 ST3GAL6Q9Y274 331 aa16.94■□□□□ 0.3
SYNC-201ENST00000373484 PUS1Q9Y606 427 aaKnown RBP eCLIP16.94■□□□□ 0.3
SYNC-201ENST00000373484 IGSF23A1L1A6 192 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 SRRM5B3KS81 715 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 SEC14L6B5MCN3 397 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 LY6G6DO95868 133 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 SLC25A6P12236 298 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 EGR1P18146 543 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 VAMP2P63027 116 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 ID3Q02535 119 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 IL24Q13007 206 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 SAXO1Q8IYX7 474 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 RAB39BQ96DA2 213 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 IGKV1-12A0A0C4DH73 117 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 RHBDL1O75783 438 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 IGKV1D-12P01611 117 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 WNT2P09544 360 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 S100A2P29034 98 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 HAAOP46952 286 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 UBE2KP61086 200 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 ZNF695Q8IW36 515 aa16.93■□□□□ 0.3
SYNC-201ENST00000373484 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.92■□□□□ 0.3
SYNC-201ENST00000373484 J3QT63 122 aa16.92■□□□□ 0.3
SYNC-201ENST00000373484 DFFBO76075 338 aa16.92■□□□□ 0.3
SYNC-201ENST00000373484 SCAF4O95104 1147 aaKnown RBP16.92■□□□□ 0.3
SYNC-201ENST00000373484 VDAC1P21796 283 aa16.92■□□□□ 0.3
SYNC-201ENST00000373484 UCP1P25874 307 aa16.92■□□□□ 0.3
SYNC-201ENST00000373484 TAGLN2P37802 199 aaKnown RBP16.92■□□□□ 0.3
SYNC-201ENST00000373484 RPS10P46783 165 aaKnown RBP16.92■□□□□ 0.3
SYNC-201ENST00000373484 GLIPR1P48060 266 aa16.92■□□□□ 0.3
SYNC-201ENST00000373484 PNRC1Q12796 327 aaPredicted RBP16.92■□□□□ 0.3
SYNC-201ENST00000373484 NMSQ5H8A3 153 aa16.92■□□□□ 0.3
SYNC-201ENST00000373484 SELENOHQ8IZQ5 122 aaKnown RBP16.92■□□□□ 0.3
SYNC-201ENST00000373484 RARRES2Q99969 163 aa16.92■□□□□ 0.3
SYNC-201ENST00000373484 NIPSNAP3BQ9BS92 247 aa16.92■□□□□ 0.3
SYNC-201ENST00000373484 PATZ1Q9HBE1 687 aaKnown RBP16.92■□□□□ 0.3
SYNC-201ENST00000373484 GAR1Q9NY12 217 aaKnown RBP16.92■□□□□ 0.3
SYNC-201ENST00000373484 UBE2J1Q9Y385 318 aaPredicted RBP16.92■□□□□ 0.3
SYNC-201ENST00000373484 FAM24AA6NFZ4 105 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms