RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 DEFA4P12838 97 aa10.62□□□□□ -0.71
CTPS1-202ENST00000372621 HTD2P86397 168 aa10.62□□□□□ -0.71
CTPS1-202ENST00000372621 FOXF2Q12947 444 aa10.62□□□□□ -0.71
CTPS1-202ENST00000372621 GAMTQ14353 236 aa10.62□□□□□ -0.71
CTPS1-202ENST00000372621 NECAP1Q8NC96 275 aa10.62□□□□□ -0.71
CTPS1-202ENST00000372621 GFOD1Q9NXC2 390 aa10.62□□□□□ -0.71
CTPS1-202ENST00000372621 VENTXO95231 258 aa10.61□□□□□ -0.71
CTPS1-202ENST00000372621 HRASP01112 189 aa10.61□□□□□ -0.71
CTPS1-202ENST00000372621 SP9P0CG40 484 aa10.61□□□□□ -0.71
CTPS1-202ENST00000372621 TMEM249Q2WGJ8 235 aa10.61□□□□□ -0.71
CTPS1-202ENST00000372621 Q3ZCU0 254 aa10.61□□□□□ -0.71
CTPS1-202ENST00000372621 HES3Q5TGS1 186 aa10.61□□□□□ -0.71
CTPS1-202ENST00000372621 RNASEH2CQ8TDP1 164 aaKnown RBP10.61□□□□□ -0.71
CTPS1-202ENST00000372621 ANAPC16Q96DE5 110 aa10.61□□□□□ -0.71
CTPS1-202ENST00000372621 NEIL1Q96FI4 390 aaPredicted RBP10.61□□□□□ -0.71
CTPS1-202ENST00000372621 QTRT1Q9BXR0 403 aaKnown RBP10.61□□□□□ -0.71
CTPS1-202ENST00000372621 WDR83OSQ9Y284 106 aa10.61□□□□□ -0.71
CTPS1-202ENST00000372621 CACNA1GO43497 2377 aa10.61□□□□□ -0.71
CTPS1-202ENST00000372621 C17orf112F2Z3M2 114 aa10.61□□□□□ -0.71
CTPS1-202ENST00000372621 GYPAP02724 150 aa10.61□□□□□ -0.71
CTPS1-202ENST00000372621 OR9G9P0C7N8 305 aa10.61□□□□□ -0.71
CTPS1-202ENST00000372621 GPX4P36969 197 aaPredicted RBP10.61□□□□□ -0.71
CTPS1-202ENST00000372621 CD177Q8N6Q3 437 aa10.61□□□□□ -0.71
CTPS1-202ENST00000372621 ZNF709Q8N972 641 aa10.61□□□□□ -0.71
CTPS1-202ENST00000372621 PSG11Q9UQ72 335 aa10.61□□□□□ -0.71
CTPS1-202ENST00000372621 GAB2Q9UQC2 676 aa10.61□□□□□ -0.71
CTPS1-202ENST00000372621 SMCO3A2RU48 225 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 DEFB108AA8MXU0 73 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 GGCTO75223 188 aaKnown RBP10.6□□□□□ -0.71
CTPS1-202ENST00000372621 KIR2DL2P43627 348 aaPredicted RBP10.6□□□□□ -0.71
CTPS1-202ENST00000372621 OR5R1Q8NH85 324 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 RFESDQ8TAC1 157 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 TRIB1Q96RU8 372 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 UFSP2Q9NUQ7 469 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 OR6C3Q9NZP0 311 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 NCOR1O75376 2440 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 TUBG1P23258 451 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 DUTP33316 252 aaKnown RBP10.6□□□□□ -0.71
CTPS1-202ENST00000372621 CDC34P49427 236 aaPredicted RBP10.6□□□□□ -0.71
CTPS1-202ENST00000372621 PDLIM4P50479 330 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 FAM3BP58499 235 aaPredicted RBP10.6□□□□□ -0.71
CTPS1-202ENST00000372621 SMIM21Q3B7S5 101 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 C1orf162Q8NEQ5 155 aaPredicted RBP10.6□□□□□ -0.71
CTPS1-202ENST00000372621 RAB1CQ92928 201 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 OR5B12Q96R08 314 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 PCGF1Q9BSM1 259 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 DCTN5Q9BTE1 182 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 TUBG2Q9NRH3 451 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 URB1O60287 2271 aaKnown RBP10.6□□□□□ -0.71
CTPS1-202ENST00000372621 PRRC2CQ9Y520 2896 aaKnown RBP10.6□□□□□ -0.71
CTPS1-202ENST00000372621 TET2Q6N021 2002 aaPredicted RBP10.6□□□□□ -0.71
CTPS1-202ENST00000372621 FAM90A9PA6NNJ1 464 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 PPP5D1E7EU14 171 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 TYMSP04818 313 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 ADH4P08319 380 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 PAX1P15863 534 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 ACOT6Q3I5F7 207 aaPredicted RBP10.6□□□□□ -0.71
CTPS1-202ENST00000372621 OR1P1Q8NH06 330 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 R3HDM4Q96D70 268 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 MSL2Q9HCI7 577 aa10.6□□□□□ -0.71
CTPS1-202ENST00000372621 C11orf94C9JXX5 98 aa10.59□□□□□ -0.71
CTPS1-202ENST00000372621 TIMM8AO60220 97 aaPredicted RBP10.59□□□□□ -0.71
CTPS1-202ENST00000372621 AMBPP02760 352 aa10.59□□□□□ -0.71
CTPS1-202ENST00000372621 CECR9P0C854 216 aa10.59□□□□□ -0.71
CTPS1-202ENST00000372621 CD1BP29016 333 aa10.59□□□□□ -0.71
CTPS1-202ENST00000372621 ACTL10Q5JWF8 245 aa10.59□□□□□ -0.71
CTPS1-202ENST00000372621 VWA1Q6PCB0 445 aa10.59□□□□□ -0.71
CTPS1-202ENST00000372621 TRAT1Q6PIZ9 186 aa10.59□□□□□ -0.71
CTPS1-202ENST00000372621 FAM90A1Q86YD7 464 aa10.59□□□□□ -0.71
CTPS1-202ENST00000372621 Q8TCH9 128 aa10.59□□□□□ -0.71
CTPS1-202ENST00000372621 TMEM170AQ8WVE7 144 aa10.59□□□□□ -0.71
CTPS1-202ENST00000372621 FZR1Q9UM11 496 aa10.59□□□□□ -0.71
CTPS1-202ENST00000372621 PRSS46E5RG02 174 aa10.59□□□□□ -0.71
CTPS1-202ENST00000372621 DVL1O14640 695 aa10.59□□□□□ -0.71
CTPS1-202ENST00000372621 RBMXL2O75526 392 aaKnown RBP10.59□□□□□ -0.71
CTPS1-202ENST00000372621 IGLV1-44P01699 117 aa10.59□□□□□ -0.71
CTPS1-202ENST00000372621 SRP14P37108 136 aaKnown RBP10.59□□□□□ -0.71
CTPS1-202ENST00000372621 DEFA6Q01524 100 aa10.59□□□□□ -0.71
CTPS1-202ENST00000372621 JOSD1Q15040 202 aaPredicted RBP10.59□□□□□ -0.71
CTPS1-202ENST00000372621 PDLIM3Q53GG5 364 aaPredicted RBP10.59□□□□□ -0.71
CTPS1-202ENST00000372621 GCSAMLQ5JQS6 135 aa10.59□□□□□ -0.71
CTPS1-202ENST00000372621 MBNL2Q5VZF2 373 aaKnown RBP10.59□□□□□ -0.71
CTPS1-202ENST00000372621 C14orf144Q96I85 54 aa10.59□□□□□ -0.71
CTPS1-202ENST00000372621 SPINT2O43291 252 aa10.58□□□□□ -0.72
CTPS1-202ENST00000372621 PKIAP61925 76 aa10.58□□□□□ -0.72
CTPS1-202ENST00000372621 P2RY6Q15077 328 aa10.58□□□□□ -0.72
CTPS1-202ENST00000372621 LOXL4Q96JB6 756 aa10.58□□□□□ -0.72
CTPS1-202ENST00000372621 ZFHX4Q86UP3 3567 aa10.58□□□□□ -0.72
CTPS1-202ENST00000372621 TMPRSS2O15393 492 aa10.58□□□□□ -0.72
CTPS1-202ENST00000372621 LY86O95711 162 aa10.58□□□□□ -0.72
CTPS1-202ENST00000372621 FABP6P51161 128 aa10.58□□□□□ -0.72
CTPS1-202ENST00000372621 GNB1P62873 340 aa10.58□□□□□ -0.72
CTPS1-202ENST00000372621 CR1LQ2VPA4 569 aa10.58□□□□□ -0.72
CTPS1-202ENST00000372621 CNEP1R1Q8N9A8 125 aa10.58□□□□□ -0.72
CTPS1-202ENST00000372621 C9orf106Q8NAJ2 232 aa10.58□□□□□ -0.72
CTPS1-202ENST00000372621 ACY3Q96HD9 319 aa10.58□□□□□ -0.72
CTPS1-202ENST00000372621 WASF3Q9UPY6 502 aa10.58□□□□□ -0.72
CTPS1-202ENST00000372621 A0A1W2PPQ1 181 aa10.58□□□□□ -0.72
CTPS1-202ENST00000372621 PDE6DO43924 150 aa10.58□□□□□ -0.72
CTPS1-202ENST00000372621 SOX15O60248 233 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms