RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 YPEL1O60688 119 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 RBMXL2O75526 392 aaKnown RBP4.55□□□□□ -1.68
ATG4A-204ENST00000372246 SCRG1O75711 98 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 CA1P00915 261 aaPredicted RBP4.55□□□□□ -1.68
ATG4A-204ENST00000372246 IL6RP08887 468 aaPredicted RBP4.55□□□□□ -1.68
ATG4A-204ENST00000372246 CTXN2P0C2S0 81 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 STAG3L3P0CL85 134 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 CHRNB4P30926 498 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 IER3P46695 156 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 PSMB3P49720 205 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 PDLIM4P50479 330 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 FXYD3Q14802 87 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 FAM189A2Q15884 450 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 C3AR1Q16581 482 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 COA6Q5JTJ3 125 aaKnown RBP4.55□□□□□ -1.68
ATG4A-204ENST00000372246 WIPI1Q5MNZ9 446 aaPredicted RBP4.55□□□□□ -1.68
ATG4A-204ENST00000372246 SPATA31B1PQ5VZV4 182 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 ZNF324BQ6AW86 544 aaPredicted RBP4.55□□□□□ -1.68
ATG4A-204ENST00000372246 LHFPL2Q6ZUX7 228 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 SMIM15Q7Z3B0 74 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 WDR5BQ86VZ2 330 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 OR8G5Q8NG78 346 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 C5orf30Q96GV9 206 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 YPEL2Q96QA6 119 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 MCRIP2Q9BUT9 160 aaKnown RBP4.55□□□□□ -1.68
ATG4A-204ENST00000372246 DEFB126Q9BYW3 111 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 UBE2ZQ9H832 354 aaPredicted RBP4.55□□□□□ -1.68
ATG4A-204ENST00000372246 PROK2Q9HC23 129 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 TMEM106BQ9NUM4 274 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 MMP17Q9ULZ9 603 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 MED12LQ86YW9 2145 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 HEATR1Q9H583 2144 aaKnown RBP4.55□□□□□ -1.68
ATG4A-204ENST00000372246 LOC102725191A0A1B0GVB3 256 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 LILRA5A6NI73 299 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 H0Y980 276 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 TP53I11O14683 189 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 SLC25A17O43808 307 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 GGCTO75223 188 aaKnown RBP4.55□□□□□ -1.68
ATG4A-204ENST00000372246 FOXH1O75593 365 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 PPBPP02775 128 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 DRD1P21728 446 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 CD24P25063 80 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 OR10J1P30954 320 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 OTX2P32243 289 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 FAM27BQ5VT28 67 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 TMEM211Q6ICI0 200 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 FGFRL1Q8N441 504 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 NHLRC2Q8NBF2 726 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 NUDT10Q8NFP7 164 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 RFESDQ8TAC1 157 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 OCC1Q8TAD7 63 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 SSMEM1Q8WWF3 244 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 CLDN23Q96B33 292 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 UHRF2Q96PU4 802 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 OR2H1Q9GZK4 316 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 OCIAD1Q9NX40 245 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 RPH3ALQ9UNE2 315 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 PXMP4Q9Y6I8 212 aa4.55□□□□□ -1.68
ATG4A-204ENST00000372246 AHCTF1Q8WYP5 2266 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 IGHV1OR15-9A0A0B4J2B8 117 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 K7EN84 100 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 S1PR2O95136 353 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 SERPINA7P05543 415 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 CD82P27701 267 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 FUT6P51993 359 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 CLDN15P56746 228 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 PPP1CBP62140 327 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 UTF1Q5T230 341 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 C10orf128Q5T292 105 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 HES3Q5TGS1 186 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 TMEM42Q69YG0 159 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 GUSBP11Q6P575 273 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 ASCL4Q6XD76 172 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 FOXL2NBQ6ZUU3 175 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 AAED1Q7RTV5 226 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 BAGE3Q86Y29 109 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 BAGE2Q86Y30 109 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 GCNT2Q8N0V5 402 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 PSMF1Q92530 271 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 WDYHV1Q96HA8 205 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 ACY3Q96HD9 319 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 CIB3Q96Q77 187 aaPredicted RBP4.54□□□□□ -1.68
ATG4A-204ENST00000372246 FOXB1Q99853 325 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 VAMP8Q9BV40 100 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 SAMD10Q9BYL1 202 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 CTDSP1Q9GZU7 261 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 TMEM38BQ9NVV0 291 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 ELOVL5Q9NYP7 299 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 OR2W1Q9Y3N9 320 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 KIAA1549Q9HCM3 1950 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 NCKAP5O14513 1909 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 EXPH5Q8NEV8 1989 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 DNAJC13O75165 2243 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 A0A1W2PR77 199 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 OR6C6A6NF89 314 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 C17orf98A8MV24 154 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 ZFAND5O76080 213 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 CELA3AP09093 270 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 MYOD1P15172 320 aa4.54□□□□□ -1.68
ATG4A-204ENST00000372246 NTF3P20783 257 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms