RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 PXMP4Q9Y6I8 212 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 CACNA1EQ15878 2313 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 CD1BP29016 333 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 DMWDQ09019 674 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 NOGQ13253 232 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 SSPNQ14714 243 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 KRTCAP3Q53RY4 240 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 OXGR1Q96P68 337 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 ZNF581Q9P0T4 197 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 LHFPL6Q9Y693 200 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 ATRXP46100 2492 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 MTCL1Q9Y4B5 1905 aaKnown RBP10.08□□□□□ -0.8
PTPN1-201ENST00000371621 IGHV1-69-2A0A0G2JMI3 117 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 IL18BPO95998 194 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 PRSS1P07477 247 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 HNRNPA1P09651 372 aaKnown RBP eCLIP10.08□□□□□ -0.8
PTPN1-201ENST00000371621 LYL1P12980 280 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 ZNF32P17041 273 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 NPBWR2P48146 333 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 TAS2R45P59539 299 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 PARM1Q6UWI2 310 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 LINC01551Q86U37 167 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 CXorf67Q86X51 503 aaPredicted RBP10.08□□□□□ -0.8
PTPN1-201ENST00000371621 ZNF703Q9H7S9 590 aaPredicted RBP10.08□□□□□ -0.8
PTPN1-201ENST00000371621 JKAMPQ9P055 326 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 ARFGEF3Q5TH69 2177 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 ZGRF1Q86YA3 2104 aa10.08□□□□□ -0.8
PTPN1-201ENST00000371621 ZDBF2Q9HCK1 2354 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 C5orf42Q9H799 3197 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 FRG2CA6NGY1 282 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 ALG1L2C9J202 215 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 HOXC12P31275 282 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 ARF6P62330 175 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 FGFRL1Q8N441 504 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 OR1F12Q8NHA8 337 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 CLEC7AQ9BXN2 247 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 IL36BQ9NZH7 164 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 OR2W1Q9Y3N9 320 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 TDRD15B5MCY1 1934 aaKnown RBP10.07□□□□□ -0.8
PTPN1-201ENST00000371621 IGKV1-9A0A0C4DH69 117 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 OR2J3O76001 311 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 HLA-DRB1P01911 266 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 GPR183P32249 361 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 ZNF525Q8N782 197 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 PILRAQ9UKJ1 303 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 A0A1B0GW64 132 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 DXOO77932 396 aaKnown RBP10.07□□□□□ -0.8
PTPN1-201ENST00000371621 BCL3P20749 454 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 DRD1P21728 446 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 RABIFP47224 123 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 PAX2Q02962 417 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 LRRC75BQ2VPJ9 315 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 Q96M66 194 aa10.07□□□□□ -0.8
PTPN1-201ENST00000371621 SRSF8Q9BRL6 282 aaKnown RBP10.07□□□□□ -0.8
PTPN1-201ENST00000371621 RANBP2P49792 3224 aaKnown RBP10.06□□□□□ -0.8
PTPN1-201ENST00000371621 LOC107984156A0A0G2JMH3 177 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 MRPL33O75394 65 aaKnown RBP10.06□□□□□ -0.8
PTPN1-201ENST00000371621 CXorf1O96002 111 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 DRD3P35462 400 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 CENPWQ5EE01 88 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 FHL5Q5TD97 284 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 PET117Q6UWS5 81 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 ARL17AQ8IVW1 177 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 MTURNQ8N3F0 131 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 ST8SIA1Q92185 356 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 CLUHP3Q96NS8 147 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 DEPPQ9NTK1 212 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 USF3Q68DE3 2245 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 WDR90Q96KV7 1748 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.06□□□□□ -0.8
PTPN1-201ENST00000371621 ZFAND5O76080 213 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 MYF5P13349 255 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 ARR3P36575 388 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 PCBD1P61457 104 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 UBE2L3P68036 154 aaKnown RBP10.06□□□□□ -0.8
PTPN1-201ENST00000371621 TMEM211Q6ICI0 200 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 ELOVL5Q9NYP7 299 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 WIPF3A6NGB9 483 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 CSN1S1P47710 185 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 CEACAM16Q2WEN9 425 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 YRDCQ86U90 279 aaKnown RBP10.06□□□□□ -0.8
PTPN1-201ENST00000371621 FER1L6-AS1Q8NA97 138 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 ZDHHC16Q969W1 377 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 FAM131CQ96AQ9 280 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 GUCD1Q96NT3 240 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 PSG11Q9UQ72 335 aa10.06□□□□□ -0.8
PTPN1-201ENST00000371621 IGKV1D-13A0A0B4J2D9 117 aa10.05□□□□□ -0.8
PTPN1-201ENST00000371621 A0A1B0GWB2 263 aa10.05□□□□□ -0.8
PTPN1-201ENST00000371621 DUX1O43812 170 aa10.05□□□□□ -0.8
PTPN1-201ENST00000371621 IGKV1-13P0DP09 117 aa10.05□□□□□ -0.8
PTPN1-201ENST00000371621 ESDP10768 282 aa10.05□□□□□ -0.8
PTPN1-201ENST00000371621 BHLHA15Q7RTS1 189 aaPredicted RBP10.05□□□□□ -0.8
PTPN1-201ENST00000371621 C18orf12Q96KH6 178 aa10.05□□□□□ -0.8
PTPN1-201ENST00000371621 CHODLQ9H9P2 273 aa10.05□□□□□ -0.8
PTPN1-201ENST00000371621 MED13Q9UHV7 2174 aa10.05□□□□□ -0.8
PTPN1-201ENST00000371621 SLC25A5P05141 298 aaKnown RBP10.05□□□□□ -0.8
PTPN1-201ENST00000371621 CLDN15P56746 228 aa10.05□□□□□ -0.8
PTPN1-201ENST00000371621 C16orf54Q6UWD8 224 aa10.05□□□□□ -0.8
PTPN1-201ENST00000371621 DNM1P46Q6ZS02 220 aa10.05□□□□□ -0.8
PTPN1-201ENST00000371621 ADTRPQ96IZ2 230 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms