RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 SCO1O75880 301 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 SEC11BP0C7V7 166 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 VSIG10L2P0DP72 767 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 MMP9P14780 707 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 CXorf66Q5JRM2 361 aaPredicted RBP12.52□□□□□ -0.41
NDC1-201ENST00000371429 WDR73Q6P4I2 378 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 OR10J6PQ8NGY7 276 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 MYO7BQ6PIF6 2116 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 PITX3O75364 302 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 PLAUP00749 431 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 IZUMO4Q1ZYL8 232 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 ZNF430Q9H8G1 570 aaPredicted RBP12.52□□□□□ -0.41
NDC1-201ENST00000371429 NIT2Q9NQR4 276 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 CBLN4Q9NTU7 201 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 MFNGO00587 321 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 PDE6DO43924 150 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 S1PR2O95136 353 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 LRRC75AQ8NAA5 344 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 POC1AQ8NBT0 407 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 ELF5Q9UKW6 265 aaPredicted RBP12.52□□□□□ -0.41
NDC1-201ENST00000371429 AUP1Q9Y679 476 aa12.52□□□□□ -0.41
NDC1-201ENST00000371429 MED12Q93074 2177 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 KLK2P20151 261 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 SERF2P84101 59 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 RIGQ13278 110 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 BPIFA4PQ86YQ2 179 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 ZNF418Q8TF45 676 aaPredicted RBP12.51□□□□□ -0.41
NDC1-201ENST00000371429 DOCK8Q8NF50 2099 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 TRAV30A0A087WSZ9 112 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 LDLRAD3Q86YD5 345 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 DRAM1Q8N682 238 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 RTN4RQ9BZR6 473 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 REG1AP05451 166 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 CSN3P07498 182 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 MGPP08493 103 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 RUNX1Q01196 453 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 RNFT1Q5M7Z0 435 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 ZNF738Q8NE65 137 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 TMEM56-RWDD3S4R434 201 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 P2RY4P51582 365 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 FAM210BQ96KR6 192 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 SEMA5BQ9P283 1151 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 TCF19Q9Y242 345 aa12.51□□□□□ -0.41
NDC1-201ENST00000371429 IQCF6A8MYZ5 107 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 FCGR2BP31994 310 aaPredicted RBP12.5□□□□□ -0.41
NDC1-201ENST00000371429 C1QL2Q7Z5L3 287 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 VKORC1L1Q8N0U8 176 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 MFSD2BA6NFX1 497 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 C12orf77C9JDV5 145 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 TM4SF5O14894 197 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 FAM24BQ8N5W8 94 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 MRPL30Q8TCC3 161 aaKnown RBP12.5□□□□□ -0.41
NDC1-201ENST00000371429 MRPL13Q9BYD1 178 aaKnown RBP12.5□□□□□ -0.41
NDC1-201ENST00000371429 H0YL77 283 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 ZP3P21754 424 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 PTTG1IPP53801 180 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 SPANXN1Q5VSR9 72 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 ASPHD2Q6ICH7 369 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 PRNTQ86SH4 94 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 OR4B1Q8NGF8 309 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 DDB2Q92466 427 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 SEC11CQ9BY50 192 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 SLC2A8Q9NY64 477 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 CHD5Q8TDI0 1954 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 SBF1O95248 1867 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 FAM90A26D6RGX4 464 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 OR5AL1P0C617 328 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 MSRB2Q9Y3D2 182 aa12.5□□□□□ -0.41
NDC1-201ENST00000371429 IGHV3OR16-12A0A075B7B8 117 aa12.49□□□□□ -0.41
NDC1-201ENST00000371429 C7orf66A4D0T2 115 aa12.49□□□□□ -0.41
NDC1-201ENST00000371429 ZNF818PQ6ZRF7 136 aa12.49□□□□□ -0.41
NDC1-201ENST00000371429 PGA5P0DJD9 388 aa12.49□□□□□ -0.41
NDC1-201ENST00000371429 NHLH1Q02575 133 aa12.49□□□□□ -0.41
NDC1-201ENST00000371429 RPL39P5Q59GN2 51 aa12.49□□□□□ -0.41
NDC1-201ENST00000371429 HSD17B13Q7Z5P4 300 aaPredicted RBP12.49□□□□□ -0.41
NDC1-201ENST00000371429 SELENOHQ8IZQ5 122 aaKnown RBP12.49□□□□□ -0.41
NDC1-201ENST00000371429 OR52M1Q8NGK5 317 aa12.49□□□□□ -0.41
NDC1-201ENST00000371429 MRPL37Q9BZE1 423 aaKnown RBP12.49□□□□□ -0.41
NDC1-201ENST00000371429 TNFSF18Q9UNG2 199 aa12.49□□□□□ -0.41
NDC1-201ENST00000371429 TIMP3P35625 211 aa12.49□□□□□ -0.41
NDC1-201ENST00000371429 ZCCHC24Q8N2G6 241 aaKnown RBP12.49□□□□□ -0.41
NDC1-201ENST00000371429 NUP37Q8NFH4 326 aa12.49□□□□□ -0.41
NDC1-201ENST00000371429 OR5AU1Q8NGC0 362 aa12.49□□□□□ -0.41
NDC1-201ENST00000371429 PDCD11Q14690 1871 aaKnown RBP12.49□□□□□ -0.41
NDC1-201ENST00000371429 IGHV3-35A0A0C4DH35 117 aa12.49□□□□□ -0.41
NDC1-201ENST00000371429 MEF2CQ06413 473 aaPredicted RBP12.49□□□□□ -0.41
NDC1-201ENST00000371429 TNFRSF9Q07011 255 aa12.49□□□□□ -0.41
NDC1-201ENST00000371429 EEF1AKMT3Q96AZ1 226 aa12.49□□□□□ -0.41
NDC1-201ENST00000371429 RSG1Q9BU20 258 aa12.49□□□□□ -0.41
NDC1-201ENST00000371429 TUSC1Q2TAM9 212 aa12.48□□□□□ -0.41
NDC1-201ENST00000371429 FOXF2Q12947 444 aa12.48□□□□□ -0.41
NDC1-201ENST00000371429 RRN3P1Q2M238 152 aa12.48□□□□□ -0.41
NDC1-201ENST00000371429 GBGT1Q8N5D6 347 aa12.48□□□□□ -0.41
NDC1-201ENST00000371429 THSD7BQ9C0I4 1608 aa12.48□□□□□ -0.41
NDC1-201ENST00000371429 DEDDO75618 318 aa12.48□□□□□ -0.41
NDC1-201ENST00000371429 OR5AC2Q9NZP5 309 aa12.48□□□□□ -0.41
NDC1-201ENST00000371429 ANKRD36A6QL64 1941 aa12.48□□□□□ -0.41
NDC1-201ENST00000371429 CGB1A6NKQ9 187 aa12.48□□□□□ -0.41
NDC1-201ENST00000371429 NPIPB7O75200 414 aa12.48□□□□□ -0.41
NDC1-201ENST00000371429 TRGV3P03979 118 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms