RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 MRPL18Q9H0U6 180 aaKnown RBP3.15□□□□□ -1.9
MCF2-203ENST00000370576 MAP1LC3AQ9H492 121 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 RBFOX1Q9NWB1 397 aaKnown RBP3.15□□□□□ -1.9
MCF2-203ENST00000370576 MTFP1Q9UDX5 166 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 VDAC3Q9Y277 283 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 FAM215AQ9Y5M1 114 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 MUC6Q6W4X9 2439 aa3.15□□□□□ -1.9
MCF2-203ENST00000370576 DAPL1A0PJW8 107 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 NKX2-6A6NCS4 301 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 IQCF6A8MYZ5 107 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 ZNF593O00488 134 aaPredicted RBP3.15□□□□□ -1.91
MCF2-203ENST00000370576 CRXO43186 299 aaPredicted RBP3.15□□□□□ -1.91
MCF2-203ENST00000370576 ZNF207O43670 478 aaKnown RBP3.15□□□□□ -1.91
MCF2-203ENST00000370576 HSBP1O75506 76 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 SPNP16150 400 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 DDTP30046 118 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 MAGEA5P43359 124 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 ZNF726P1Q15940 193 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 MLANAQ16655 118 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 SLC25A35Q3KQZ1 300 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 RNF212Q495C1 297 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 PHLDA2Q53GA4 152 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 FAM78BQ5VT40 261 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 SAMD13Q5VXD3 122 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 OR6F1Q8NGZ6 308 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 OR4K13Q8NH42 304 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 SLAMF6Q96DU3 332 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 ST6GAL2Q96JF0 529 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 OR11A1Q9GZK7 315 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 PBOV1Q9GZY1 135 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 NOX3Q9HBY0 568 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 CISD1Q9NZ45 108 aaKnown RBP3.15□□□□□ -1.91
MCF2-203ENST00000370576 COPZ2Q9P299 210 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 ERG28Q9UKR5 140 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 MED12LQ86YW9 2145 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 MEIKINA0A087WXM9 373 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 IGHV2-70DA0A0C4DH43 119 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 TMEM272A0A1B0GTI8 110 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 RPS10-NUDT3A0A1W2PQS6 291 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 CXorf65A6NEN9 183 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 FAM74A7A6NL05 159 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 A8MWP6 167 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 FAM25AB3EWG3 89 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 FAM25CB3EWG5 89 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 FAM25GB3EWG6 89 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 LY6LH3BQJ8 138 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 HSPB6O14558 160 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 DHRS3O75911 302 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 NUDT3O95989 172 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 SULT1A3P0DMM9 295 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 SULT1A4P0DMN0 295 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 CGB3P0DN86 165 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 CGB7P0DN87 165 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 FOLR2P14207 255 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 TCN2P20062 427 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 RAB3BP20337 219 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 OMGP23515 440 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 ZBTB25P24278 435 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 SULT1A1P50225 295 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 SULT1A2P50226 295 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 TNFAIP6P98066 277 aaPredicted RBP3.15□□□□□ -1.91
MCF2-203ENST00000370576 FAM74A3Q4VXF1 159 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 KCTD18Q6PI47 426 aaPredicted RBP3.15□□□□□ -1.91
MCF2-203ENST00000370576 HMGN2P46Q86SG4 172 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 PRR22Q8IZ63 422 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 SLC22A24Q8N4F4 322 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 SCCPDHQ8NBX0 429 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 OR8B12Q8NGG6 310 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 OR10D3Q8NH80 312 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 MCFD2Q8NI22 146 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 ADTRPQ96IZ2 230 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 CABLES2Q9BTV7 478 aa3.15□□□□□ -1.91
MCF2-203ENST00000370576 IGKV1-27A0A075B6S5 117 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 A0A1B0GX51 115 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 SNRPGP15A8MWD9 76 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 TRAPPC2LH3BP13 241 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 TMEM178BH3BS89 294 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 PGLYRP1O75594 196 aaPredicted RBP3.14□□□□□ -1.91
MCF2-203ENST00000370576 NAPSAO96009 420 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 P0C879 139 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 PSG2P11465 335 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 ZNF250P15622 560 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 CLDN17P56750 224 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 CD81P60033 236 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 CKS1BP61024 79 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 HNRNPA0Q13151 305 aaKnown RBP3.14□□□□□ -1.91
MCF2-203ENST00000370576 RSU1Q15404 277 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 LYPD4Q6UWN0 246 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 Q6ZWC4 215 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 HOGA1Q86XE5 327 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 C11orf53Q8IXP5 236 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 ZNF433Q8N7K0 673 aaPredicted RBP3.14□□□□□ -1.91
MCF2-203ENST00000370576 NEXN-AS1Q8NBZ9 246 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 OR6N1Q8NGY5 312 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 OR5AK2Q8NH90 309 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 COQ8AQ8NI60 647 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 HIST1H2BAQ96A08 127 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 LINC00477Q96M19 166 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 MLST8Q9BVC4 326 aa3.14□□□□□ -1.91
MCF2-203ENST00000370576 ZC4H2Q9NQZ6 224 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms