RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 C11orf88Q6PI97 169 aa12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 CD300LFQ8TDQ1 290 aa12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 NBR2O15453 112 aa12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 RBFOX2O43251 390 aaKnown RBP eCLIP12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 TSPAN9O75954 239 aa12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 RND3P61587 244 aa12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 KRTAP24-1Q3LI83 254 aa12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 ABCA11PQ4W5N1 156 aa12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 TMEM177Q53S58 311 aa12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 TCTEX1D1Q8N7M0 179 aa12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 C5orf56Q8N8D9 126 aa12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 POC5Q8NA72 575 aa12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 NPBQ8NG41 125 aa12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 OR4S2Q8NH73 311 aa12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 OSR1Q8TAX0 266 aaPredicted RBP12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 TSNAXQ99598 290 aaKnown RBP12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 PRSS22Q9GZN4 317 aa12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 SLC2A9Q9NRM0 540 aa12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 PLSCR3Q9NRY6 295 aa12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 KIAA1456Q9P272 454 aa12.39□□□□□ -0.43
PRPF38B-202ENST00000370022 FCGR3BO75015 233 aa12.38□□□□□ -0.43
PRPF38B-202ENST00000370022 NDUFA3O95167 84 aa12.38□□□□□ -0.43
PRPF38B-202ENST00000370022 SPDEFO95238 335 aa12.38□□□□□ -0.43
PRPF38B-202ENST00000370022 RLN1P04808 185 aa12.38□□□□□ -0.43
PRPF38B-202ENST00000370022 CTSDP07339 412 aaPredicted RBP12.38□□□□□ -0.43
PRPF38B-202ENST00000370022 RPS16P62249 146 aaKnown RBP12.38□□□□□ -0.43
PRPF38B-202ENST00000370022 CCDC71LQ8N9Z2 235 aa12.38□□□□□ -0.43
PRPF38B-202ENST00000370022 OR13C8Q8NGS7 320 aa12.38□□□□□ -0.43
PRPF38B-202ENST00000370022 OR4F5Q8NH21 305 aa12.38□□□□□ -0.43
PRPF38B-202ENST00000370022 MARCH1Q8TCQ1 289 aa12.38□□□□□ -0.43
PRPF38B-202ENST00000370022 MRGPRFQ96AM1 343 aa12.38□□□□□ -0.43
PRPF38B-202ENST00000370022 SLC25A21Q9BQT8 299 aaPredicted RBP12.38□□□□□ -0.43
PRPF38B-202ENST00000370022 LIN7CQ9NUP9 197 aaKnown RBP12.38□□□□□ -0.43
PRPF38B-202ENST00000370022 C14orf166Q9Y224 244 aaKnown RBP12.38□□□□□ -0.43
PRPF38B-202ENST00000370022 F2RL1P55085 397 aa12.37□□□□□ -0.43
PRPF38B-202ENST00000370022 RAG2P55895 527 aa12.37□□□□□ -0.43
PRPF38B-202ENST00000370022 FOXL1Q12952 345 aa12.37□□□□□ -0.43
PRPF38B-202ENST00000370022 PHLDA2Q53GA4 152 aa12.37□□□□□ -0.43
PRPF38B-202ENST00000370022 Q6ZSV7 163 aa12.37□□□□□ -0.43
PRPF38B-202ENST00000370022 SPAG16Q8N0X2 631 aa12.37□□□□□ -0.43
PRPF38B-202ENST00000370022 Q8N2B8 174 aa12.37□□□□□ -0.43
PRPF38B-202ENST00000370022 FAM71E2Q8N5Q1 922 aa12.37□□□□□ -0.43
PRPF38B-202ENST00000370022 Q8N9W7 124 aa12.37□□□□□ -0.43
PRPF38B-202ENST00000370022 OR51H1Q8NH63 302 aa12.37□□□□□ -0.43
PRPF38B-202ENST00000370022 RITA1Q96K30 269 aa12.37□□□□□ -0.43
PRPF38B-202ENST00000370022 HARBI1Q96MB7 349 aa12.37□□□□□ -0.43
PRPF38B-202ENST00000370022 RASL11BQ9BPW5 248 aa12.37□□□□□ -0.43
PRPF38B-202ENST00000370022 C16orf95Q9H693 158 aa12.37□□□□□ -0.43
PRPF38B-202ENST00000370022 FAM212BQ9NTI7 297 aaPredicted RBP12.37□□□□□ -0.43
PRPF38B-202ENST00000370022 COPZ2Q9P299 210 aa12.37□□□□□ -0.43
PRPF38B-202ENST00000370022 GPR132Q9UNW8 380 aa12.37□□□□□ -0.43
PRPF38B-202ENST00000370022 A0A1B0GUS0 222 aa12.36□□□□□ -0.43
PRPF38B-202ENST00000370022 TMEM89A2RUT3 159 aa12.36□□□□□ -0.43
PRPF38B-202ENST00000370022 SHOXO15266 292 aa12.36□□□□□ -0.43
PRPF38B-202ENST00000370022 CRYZL1O95825 349 aa12.36□□□□□ -0.43
PRPF38B-202ENST00000370022 AMY1AP04745 511 aa12.36□□□□□ -0.43
PRPF38B-202ENST00000370022 F2RP25116 425 aa12.36□□□□□ -0.43
PRPF38B-202ENST00000370022 PIGPP57054 158 aa12.36□□□□□ -0.43
PRPF38B-202ENST00000370022 RELBQ01201 579 aa12.36□□□□□ -0.43
PRPF38B-202ENST00000370022 TBC1D26Q86UD7 250 aa12.36□□□□□ -0.43
PRPF38B-202ENST00000370022 GPHA2Q96T91 129 aa12.36□□□□□ -0.43
PRPF38B-202ENST00000370022 AIFM2Q9BRQ8 373 aa12.36□□□□□ -0.43
PRPF38B-202ENST00000370022 C19orf24Q9BVV8 132 aa12.36□□□□□ -0.43
PRPF38B-202ENST00000370022 RRHO14718 337 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 MPPED1O15442 326 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 B3GALNT1O75752 331 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 UPK1BO75841 260 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 HNRNPCP07910 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 BRWD1-AS2P59051 145 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 BLCAPP62952 87 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 RBMS2Q15434 407 aaKnown RBP12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 OR2B11Q5JQS5 317 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 THOC7Q6I9Y2 204 aaKnown RBP12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 OR2T6Q8NHC8 308 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 ZNF702PQ9H963 129 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 BEX1Q9HBH7 125 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 MMP24Q9Y5R2 645 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 DNHD1Q96M86 4753 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 PEX14O75381 377 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 HPRT1P00492 218 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 HRASP01112 189 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 PI3P19957 117 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 CNTFRP26992 372 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 PSG5Q15238 335 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 C5orf64Q2M2E5 130 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 VMA21Q3ZAQ7 101 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 RTBDNQ9BSG5 229 aaPredicted RBP12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 C5orf66Q9H5L9 145 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 PLEKHA2Q9HB19 425 aa12.35□□□□□ -0.43
PRPF38B-202ENST00000370022 LINC00854A0A1B0GVQ3 168 aa12.34□□□□□ -0.43
PRPF38B-202ENST00000370022 PLA2G10O15496 165 aa12.34□□□□□ -0.43
PRPF38B-202ENST00000370022 LYRM1O43325 122 aa12.34□□□□□ -0.43
PRPF38B-202ENST00000370022 RAMP3O60896 148 aa12.34□□□□□ -0.43
PRPF38B-202ENST00000370022 IGLV2-23P01705 113 aa12.34□□□□□ -0.43
PRPF38B-202ENST00000370022 TAS2R31P59538 309 aa12.34□□□□□ -0.43
PRPF38B-202ENST00000370022 UBE2KP61086 200 aa12.34□□□□□ -0.43
PRPF38B-202ENST00000370022 PLGLAQ15195 96 aa12.34□□□□□ -0.43
PRPF38B-202ENST00000370022 LIN54Q6MZP7 749 aa12.34□□□□□ -0.43
PRPF38B-202ENST00000370022 VSTM2AQ8TAG5 236 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms