RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 LINC00310P59036 64 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 YPEL3P61236 119 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-204ENST00000369530 RSPO1Q2MKA7 263 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-204ENST00000369530 ANKRD55Q3KP44 614 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 C1orf100Q5SVJ3 147 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 TMEM211Q6ICI0 200 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 PRR27Q6MZM9 219 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 PPP1R14AQ96A00 147 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 FAM3DQ96BQ1 224 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 REEP6Q96HR9 211 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 UHRF2Q96PU4 802 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 PRRG4Q9BZD6 226 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 TXNIPQ9H3M7 391 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 C5orf66Q9H5L9 145 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 CKLFQ9UBR5 152 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 KLHDC2Q9Y2U9 406 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 NSG2Q9Y328 171 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 PXMP4Q9Y6I8 212 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 URGCP-MRPS24S4R325 110 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 TRAV8-7A0A075B6U6 113 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 NKX2-6A6NCS4 301 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 FSTL3O95633 263 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 HBE1P02100 147 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 OR10J4P0C629 311 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 UCP3P55916 312 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 CLDN17P56750 224 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 CCL20P78556 96 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 PLGLB1Q02325 96 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 DMRTC1Q5HYR2 192 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 SAMD13Q5VXD3 122 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 ZNF66Q6ZN08 573 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 CHODLQ9H9P2 273 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 CRIM1Q9NZV1 1036 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 HSF4Q9ULV5 492 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 EMC9Q9Y3B6 208 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 PLPP3O14495 311 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 RBFOX2O43251 390 aaKnown RBP eCLIP5.77□□□□□ -1.493e-6■■■■□ 22.3
CSDE1-204ENST00000369530 HRASP01112 189 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 IGLV3-1P01715 115 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 KITLGP21583 273 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 CCNOP22674 350 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 IGHV1-2P23083 117 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 CSNK1A1P48729 337 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 PMPCAQ10713 525 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 GFRALQ6UXV0 394 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 ASCL4Q6XD76 172 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 CYP2G1PQ6ZSU1 146 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 TMEM217Q8N7C4 229 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 CCDC71LQ8N9Z2 235 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 SCGB3A2Q96PL1 93 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 RTBDNQ9BSG5 229 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-204ENST00000369530 DECR2Q9NUI1 292 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 DHDHQ9UQ10 334 aa5.77□□□□□ -1.49
CSDE1-204ENST00000369530 TPRP12270 2363 aaKnown RBP5.76□□□□□ -1.49
CSDE1-204ENST00000369530 LILRA1O75019 489 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 IGHG4P01861 327 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 CD99P14209 185 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 CDAP32320 146 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 C10orf128Q5T292 105 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 NIT1Q86X76 327 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 ASB10Q8WXI3 467 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 ANAPC16Q96DE5 110 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 SDSLQ96GA7 329 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 AMELYQ99218 206 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 TAX1BP3O14907 124 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 TOX4O94842 621 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 TSPOP30536 169 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 Q0VG73 95 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 IL13RA2Q14627 380 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 GABRA6Q16445 453 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 SLC22A6Q4U2R8 563 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 WDR25Q64LD2 544 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-204ENST00000369530 ASPHD2Q6ICH7 369 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 LRTM2Q8N967 370 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 OR10AC1Q8NH08 325 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 OR8S1Q8NH09 359 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 MRPL24Q96A35 216 aaKnown RBP5.76□□□□□ -1.49
CSDE1-204ENST00000369530 TMEM186Q96B77 213 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 MEGF9Q9H1U4 602 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 SLC35D1Q9NTN3 355 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 TMEM38BQ9NVV0 291 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 TP53TG3Q9ULZ0 132 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 ARID1AO14497 2285 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 TMEM212A6NML5 194 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 F5H5K5 113 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 FSHBP01225 129 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 IGHG1P01857 330 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 COL8A1P27658 744 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 GPR6P46095 362 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-204ENST00000369530 FOXG1P55316 489 aaPredicted RBP5.76□□□□□ -1.49
CSDE1-204ENST00000369530 TPPP2P59282 170 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 Q6ZT83 130 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 FAM214BQ7L5A3 538 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 ZNF679Q8IYX0 411 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 MTURNQ8N3F0 131 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 OR10W1Q8NGF6 305 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 OR52L2PQ8NGH6 319 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 OR11L1Q8NGX0 322 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 OR10D3Q8NH80 312 aa5.76□□□□□ -1.49
CSDE1-204ENST00000369530 GPER1Q99527 375 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms