RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 SESN1Q9Y6P5 492 aa11.48□□□□□ -0.57
HMGCS2-201ENST00000369406 TRAV3A0A0B4J244 114 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 A0A1B0GU03 582 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 BCL2L11O43521 198 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 IGKV1-16P04430 117 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 OR9G9P0C7N8 305 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 PLA2G2AP14555 144 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 SSX9Q7RTT3 188 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 ABHD12Q8N2K0 398 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 FAM216AQ8WUB2 273 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 ST6GALNAC6Q969X2 333 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 AIFM2Q9BRQ8 373 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 MMP24Q9Y5R2 645 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 IGHV2-26A0A0B4J1V2 119 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 A0A0D9SG52 128 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 SPDEFO95238 335 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 GOSR1O95249 250 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 COX7A1P24310 79 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 LMO4P61968 165 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 TAGLNQ01995 201 aaKnown RBP11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 TOR2AQ5JU69 321 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 INO80EQ8NBZ0 244 aaPredicted RBP11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 CLDND2Q8NHS1 167 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 R3HDM4Q96D70 268 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 SPIN2AQ99865 258 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 SPIN2BQ9BPZ2 258 aa11.47□□□□□ -0.57
HMGCS2-201ENST00000369406 ZNF469Q96JG9 3925 aaPredicted RBP11.46□□□□□ -0.57
HMGCS2-201ENST00000369406 MARCH11A6NNE9 402 aa11.46□□□□□ -0.57
HMGCS2-201ENST00000369406 RLN2P04090 185 aa11.46□□□□□ -0.57
HMGCS2-201ENST00000369406 COX6B1P14854 86 aa11.46□□□□□ -0.57
HMGCS2-201ENST00000369406 RPL12P30050 165 aaKnown RBP11.46□□□□□ -0.57
HMGCS2-201ENST00000369406 ARF6P62330 175 aa11.46□□□□□ -0.57
HMGCS2-201ENST00000369406 ESCO2Q56NI9 601 aa11.46□□□□□ -0.57
HMGCS2-201ENST00000369406 SIRT7Q9NRC8 400 aa11.46□□□□□ -0.57
HMGCS2-201ENST00000369406 MMP26Q9NRE1 261 aa11.46□□□□□ -0.57
HMGCS2-201ENST00000369406 IGSF23A1L1A6 192 aa11.46□□□□□ -0.58
HMGCS2-201ENST00000369406 FAM24AA6NFZ4 105 aa11.46□□□□□ -0.58
HMGCS2-201ENST00000369406 LEUTXA8MZ59 168 aa11.46□□□□□ -0.58
HMGCS2-201ENST00000369406 PAX2Q02962 417 aa11.46□□□□□ -0.58
HMGCS2-201ENST00000369406 KLRD1Q13241 179 aa11.46□□□□□ -0.58
HMGCS2-201ENST00000369406 HCP5Q6MZN7 132 aa11.46□□□□□ -0.58
HMGCS2-201ENST00000369406 ALKAL2Q6UX46 152 aa11.46□□□□□ -0.58
HMGCS2-201ENST00000369406 LINC00311Q8N616 119 aa11.46□□□□□ -0.58
HMGCS2-201ENST00000369406 SMIM3Q9BZL3 60 aa11.46□□□□□ -0.58
HMGCS2-201ENST00000369406 WFDC1Q9HC57 220 aa11.46□□□□□ -0.58
HMGCS2-201ENST00000369406 LOC105371242A0A075B767 164 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 SRRM4A7MD48 611 aaKnown RBP11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 TRIM77I1YAP6 450 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 GPR37O15354 613 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 CHST1O43916 411 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 IGLV1-47P01700 117 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 PET100P0DJ07 73 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 SLC25A6P12236 298 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 LCN2P80188 198 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 NHLH2Q02577 135 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 SPINK9Q5DT21 86 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 HIST2H2BCQ6DN03 193 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 OR10X1Q8NGY0 326 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 OR9G1Q8NH87 305 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 S1PR3Q99500 378 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 FAM212BQ9NTI7 297 aaPredicted RBP11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 E5RGE8 158 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 H3BP45 60 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 LIPFP07098 398 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 IAPPP10997 89 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 PAX6P26367 422 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 THBS3P49746 956 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 OR2B8PP59922 312 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 PNKDQ8N490 385 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 C8orf31Q8N9H6 132 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 LRRC20Q8TCA0 184 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 PLEKHA2Q9HB19 425 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 NUP50Q9UKX7 468 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 NAV3Q8IVL0 2385 aa11.45□□□□□ -0.58
HMGCS2-201ENST00000369406 ITPR2Q14571 2701 aa11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 NAV2Q8IVL1 2488 aa11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 RBFOX2O43251 390 aaKnown RBP eCLIP11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 HPRT1P00492 218 aa11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 MYOD1P15172 320 aa11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 TCTEX1D1Q8N7M0 179 aa11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 ST8SIA2Q92186 375 aa11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 PERPQ96FX8 193 aa11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 FBXL17Q9UF56 701 aa11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 IGHV4-61A0A0C4DH41 118 aa11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 KANTRA0A1W2PQU2 76 aa11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 FAM157AC9JC47 383 aa11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 H0YJW9 148 aa11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 PDZD9Q8IXQ8 264 aa11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 OR4P4Q8NGL7 312 aa11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 ZDHHC16Q969W1 377 aa11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 RITA1Q96K30 269 aa11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 NABP2Q9BQ15 211 aa11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 ZNF471Q9BX82 626 aaPredicted RBP11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 QTRT1Q9BXR0 403 aaKnown RBP11.44□□□□□ -0.58
HMGCS2-201ENST00000369406 IGHV4-30-2A0A087WSY4 118 aa11.43□□□□□ -0.58
HMGCS2-201ENST00000369406 RPS10-NUDT3A0A1W2PQS6 291 aa11.43□□□□□ -0.58
HMGCS2-201ENST00000369406 WRBO00258 174 aa11.43□□□□□ -0.58
HMGCS2-201ENST00000369406 ZNF137PP52743 207 aa11.43□□□□□ -0.58
HMGCS2-201ENST00000369406 ATP5J2P56134 94 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms