RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 ZNF788Q6ZQV5 615 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 OR2Z1Q8NG97 314 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 EMG1Q92979 244 aaKnown RBP13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 GNPNAT1Q96EK6 184 aaPredicted RBP13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 ZNF479Q96JC4 524 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 FNDC4Q9H6D8 234 aaPredicted RBP13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 TBL2Q9Y4P3 447 aaKnown RBP13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 DPRXA6NFQ7 191 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 FBLL1A6NHQ2 334 aaKnown RBP13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 DXOO77932 396 aaKnown RBP13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 CSRP1P21291 193 aaKnown RBP13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 SNU13P55769 128 aaKnown RBP13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 HERV-K104P63124 156 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 TGFBR3Q03167 851 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 PCK2Q16822 640 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 PHYHD1Q5SRE7 291 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 STUMQ69YW2 141 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 FDX2Q6P4F2 183 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 ZNF519Q8TB69 540 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 PYGO2Q9BRQ0 406 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 RAXQ9Y2V3 346 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 HMGB3O15347 200 aaKnown RBP13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 YPEL1O60688 119 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 SRSF7Q16629 238 aaKnown RBP eCLIP13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 FAM71F2Q6NXP2 309 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 RTN4IP1Q8WWV3 396 aaPredicted RBP13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 C4orf45Q96LM5 186 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 YPEL2Q96QA6 119 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 TMEM38BQ9NVV0 291 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 ELOVL5Q9NYP7 299 aa13.1□□□□□ -0.31
SEMA6C-202ENST00000368912 IGLC7A0M8Q6 106 aa13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 MEGF11A6BM72 1044 aa13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 RAC3P60763 192 aa13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 RPL23P62829 140 aaKnown RBP13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 CEACAM21Q3KPI0 293 aa13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 LRRC10Q5BKY1 277 aa13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 OR2C3Q8N628 320 aa13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 OR13G1Q8NGZ3 307 aa13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 TMEM204Q9BSN7 226 aa13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 CACNA1DQ01668 2161 aa13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 OR6C6A6NF89 314 aa13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 FXYD4P59646 89 aa13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 LYZL2Q7Z4W2 148 aa13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 WDYHV1Q96HA8 205 aa13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 KIAA1324LA8MWY0 1029 aaPredicted RBP13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 TRAPPC2LH3BP13 241 aa13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 ZNF253O75346 499 aa13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 RPS4XP62701 263 aaKnown RBP13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 KIAA1644Q3SXP7 199 aa13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 SPIN3Q5JUX0 258 aa13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 TMEM14AQ9Y6G1 99 aa13.09□□□□□ -0.31
SEMA6C-202ENST00000368912 IFNA5P01569 189 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 LCN12Q6JVE5 192 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 OR4P4Q8NGL7 312 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 BANF2Q9H503 90 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 PROB1E7EW31 1015 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 IFI6P09912 130 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 CBLN1P23435 193 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 FOXG1P55316 489 aaPredicted RBP13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 LINC01590Q5TEZ4 76 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 TSPO2Q5TGU0 170 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 OR4F5Q8NH21 305 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 OR4F4Q96R69 305 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 GEMIN7Q9H840 131 aaKnown RBP13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 NRN1Q9NPD7 142 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 ZZEF1O43149 2961 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 MUC21A0A0G2JKD1 596 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 MUC21A0A140T8X8 626 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 GABRA6Q16445 453 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 MUC21Q5SSG8 566 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 FBXL14Q8N1E6 418 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 OR51E1Q8TCB6 317 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 CISD1Q9NZ45 108 aaKnown RBP13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 OR51B2Q9Y5P1 312 aa13.08□□□□□ -0.32
SEMA6C-202ENST00000368912 TAX1BP3O14907 124 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 PDE6DO43924 150 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 LMX1BO60663 402 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 PHLDA2Q53GA4 152 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 Q56UQ5 140 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 OR52M1Q8NGK5 317 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 SCGB1C1Q8TD33 95 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 NAA38Q9BRA0 125 aaKnown RBP13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 SSSCA1O60232 199 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 GYPAP02724 150 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 ANOS1P23352 680 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 NKX2-1P43699 371 aaPredicted RBP13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 LRRC75AQ8NAA5 344 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 ZNF439Q8NDP4 499 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 SPRY4Q9C004 299 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 ZNF207O43670 478 aaKnown RBP13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 RAD51DO75771 328 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 LYZL6O75951 148 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 DYNLT3P51808 116 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 OR8G5Q8NG78 346 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 OTOSQ8NHW6 89 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 ANAPC16Q96DE5 110 aa13.07□□□□□ -0.32
SEMA6C-202ENST00000368912 DHHO43323 396 aa13.06□□□□□ -0.32
SEMA6C-202ENST00000368912 ZNF205O95201 554 aa13.06□□□□□ -0.32
SEMA6C-202ENST00000368912 GGTLC2Q14390 218 aa13.06□□□□□ -0.32
SEMA6C-202ENST00000368912 SPATA46Q5T0L3 261 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms