RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 AKR1E2Q96JD6 320 aa8.11□□□□□ -1.11
TPM3-210ENST00000368530 RNF126Q9BV68 326 aa8.11□□□□□ -1.11
TPM3-210ENST00000368530 FAM234AQ9H0X4 552 aa8.11□□□□□ -1.11
TPM3-210ENST00000368530 HEXA-AS1Q9H8Q6 139 aa8.11□□□□□ -1.11
TPM3-210ENST00000368530 TNFSF18Q9UNG2 199 aa8.11□□□□□ -1.11
TPM3-210ENST00000368530 IGHV3OR16-10A0A075B7F0 116 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 A0A1W2PPE3 182 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 NDUFB3O43676 98 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 FCN3O75636 299 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 SERPINE2P07093 398 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 UCP1P25874 307 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 HTD2P86397 168 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 IL15RAQ13261 267 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 C17orf58Q2M2W7 97 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 Q3ZCU0 254 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 UTF1Q5T230 341 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 PRAMEF5Q5TYX0 476 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 TMEM65Q6PI78 240 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 OR52M1Q8NGK5 317 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 OR1S1Q8NH92 325 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 TMEM56Q96MV1 263 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 C19orf12Q9NSK7 152 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 JPT1Q9UK76 154 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 TMEM56-RWDD3S4R434 201 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 DOCK11Q5JSL3 2073 aa8.1□□□□□ -1.11
TPM3-210ENST00000368530 KBTBD11-OT1A0A1B0GTJ5 212 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 MDFIC2A0A1B0GVS7 189 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 RNF222A6NCQ9 220 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 F2RL2O00254 374 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 DVL1O14640 695 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 SLC31A2O15432 143 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 ATP6V1G1O75348 118 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 NXPH3O95157 252 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 CDS2O95674 445 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 CFDP00746 253 aaPredicted RBP8.09□□□□□ -1.11
TPM3-210ENST00000368530 CGB3P0DN86 165 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 CGB7P0DN87 165 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 LOXL3P58215 753 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 ERVFRD-1P60508 538 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 RPL30P62888 115 aaKnown RBP8.09□□□□□ -1.11
TPM3-210ENST00000368530 MORN2Q502X0 79 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 MIDNQ504T8 468 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 PRSS54Q6PEW0 395 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 SLC7A5P1Q8MH63 180 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 INO80EQ8NBZ0 244 aaPredicted RBP8.09□□□□□ -1.11
TPM3-210ENST00000368530 RNASE11Q8TAA1 199 aaKnown RBP8.09□□□□□ -1.11
TPM3-210ENST00000368530 RBPMSQ93062 196 aaKnown RBP8.09□□□□□ -1.11
TPM3-210ENST00000368530 RRNAD1Q96FB5 475 aaKnown RBP8.09□□□□□ -1.11
TPM3-210ENST00000368530 MS4A7Q9GZW8 240 aaPredicted RBP8.09□□□□□ -1.11
TPM3-210ENST00000368530 TOLLIPQ9H0E2 274 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 NCOR1P1Q9H4R4 102 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 LIN7CQ9NUP9 197 aaKnown RBP8.09□□□□□ -1.11
TPM3-210ENST00000368530 CTSZQ9UBR2 303 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 CLN8Q9UBY8 286 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 TMED3Q9Y3Q3 217 aa8.09□□□□□ -1.11
TPM3-210ENST00000368530 IGHV2-70DA0A0C4DH43 119 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 A0A0D9SG52 128 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 hADV38S2A0JD32 116 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 MSGN1A6NI15 193 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 K7EPK0 472 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 TNFRSF13BO14836 293 aaPredicted RBP8.08□□□□□ -1.12
TPM3-210ENST00000368530 MMP23AO75900 390 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 FSTL3O95633 263 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 MBPP02686 304 aaPredicted RBP8.08□□□□□ -1.12
TPM3-210ENST00000368530 PET100P0DJ07 73 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 CCL3L1P16619 93 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 NUP62P37198 522 aaPredicted RBP8.08□□□□□ -1.12
TPM3-210ENST00000368530 GPR12P47775 334 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 GNG10P50151 68 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 LINC00205P59089 165 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 KRTAP10-3P60369 221 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 RPL31P62899 125 aaKnown RBP8.08□□□□□ -1.12
TPM3-210ENST00000368530 ZNF273Q14593 569 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 SMCO1Q147U7 214 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 IZUMO4Q1ZYL8 232 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 DEFB112Q30KQ8 113 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 ESCO2Q56NI9 601 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 LRRC10Q5BKY1 277 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 TEX261Q6UWH6 196 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 ZNF841Q6ZN19 808 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 ACOT7LQ6ZUV0 252 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 KCNRGQ8N5I3 272 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 FAM71E2Q8N5Q1 922 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 ZNF680Q8NEM1 530 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 TCTEX1D2Q8WW35 142 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 WFDC12Q8WWY7 111 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 SSBP3Q9BWW4 388 aaPredicted RBP8.08□□□□□ -1.12
TPM3-210ENST00000368530 ZC4H2Q9NQZ6 224 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 SDHAF2Q9NX18 166 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 GFOD1Q9NXC2 390 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 IDI2-AS1Q9NZ38 188 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 RCL1Q9Y2P8 373 aaKnown RBP8.08□□□□□ -1.12
TPM3-210ENST00000368530 U3KQ87 197 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 A0A0G2JRQ6 117 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 KANTRA0A1W2PQU2 76 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 FAM181BA6NEQ2 426 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 ZNF729A6NN14 1252 aaPredicted RBP8.08□□□□□ -1.12
TPM3-210ENST00000368530 C17orf98A8MV24 154 aa8.08□□□□□ -1.12
TPM3-210ENST00000368530 HOXA3O43365 443 aaPredicted RBP8.08□□□□□ -1.12
TPM3-210ENST00000368530 YPEL1O60688 119 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms