RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 LYNX1G3V0Z9 82 aa11.46□□□□□ -0.57
SHC1-202ENST00000368445 LYNX1P0DP58 116 aa11.46□□□□□ -0.57
SHC1-202ENST00000368445 MMP9P14780 707 aa11.46□□□□□ -0.57
SHC1-202ENST00000368445 TDGF1P3P51864 188 aa11.46□□□□□ -0.57
SHC1-202ENST00000368445 ZFP82Q8N141 532 aa11.46□□□□□ -0.57
SHC1-202ENST00000368445 RPRMQ9NS64 109 aa11.46□□□□□ -0.57
SHC1-202ENST00000368445 ELOVL5Q9NYP7 299 aa11.46□□□□□ -0.57
SHC1-202ENST00000368445 DNASE2O00115 360 aaPredicted RBP11.46□□□□□ -0.58
SHC1-202ENST00000368445 CCL3L1P16619 93 aa11.46□□□□□ -0.58
SHC1-202ENST00000368445 FGF7P21781 194 aa11.46□□□□□ -0.58
SHC1-202ENST00000368445 NHLH1Q02575 133 aa11.46□□□□□ -0.58
SHC1-202ENST00000368445 CLRN3Q8NCR9 226 aa11.46□□□□□ -0.58
SHC1-202ENST00000368445 VSIRQ9H7M9 311 aa11.46□□□□□ -0.58
SHC1-202ENST00000368445 NDRG3Q9UGV2 375 aa11.46□□□□□ -0.58
SHC1-202ENST00000368445 JPT1Q9UK76 154 aa11.46□□□□□ -0.58
SHC1-202ENST00000368445 LAMP3Q9UQV4 416 aa11.46□□□□□ -0.58
SHC1-202ENST00000368445 KPTNQ9Y664 436 aa11.46□□□□□ -0.58
SHC1-202ENST00000368445 KALRNO60229 2985 aa11.46□□□□□ -0.58
SHC1-202ENST00000368445 C15orf65H3BRN8 121 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 DUTP33316 252 aaKnown RBP11.45□□□□□ -0.58
SHC1-202ENST00000368445 RAB11AP62491 216 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 ZNF66Q6ZN08 573 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 C1orf87Q8N0U7 546 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 ZNF561Q8N587 486 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 RHOVQ96L33 236 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 DYSFO75923 2080 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 PPIAL4EA0A075B759 164 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 TRAV38-1A0A0B4J264 116 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 RBFOX3A6NFN3 312 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 PPIAL4DF5H284 164 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 PPIAL4FP0DN26 164 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 PLA2G5P39877 138 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 ZNF787Q6DD87 383 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 SLX1AQ9BQ83 275 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 AIFM2Q9BRQ8 373 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 SAV1Q9H4B6 383 aaPredicted RBP11.45□□□□□ -0.58
SHC1-202ENST00000368445 PPIAL4AQ9Y536 164 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 hADV38S2A0JD32 116 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 PLXNB1O43157 2135 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 SOX15O60248 233 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 CD3EP07766 207 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 HTD2P86397 168 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 CA5BP1Q8WTZ4 195 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 SLC35B3Q9H1N7 401 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 HIPK2Q9H2X6 1198 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 SLC25A22Q9H936 323 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 RAB9BQ9NP90 201 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 HIVEP3Q5T1R4 2406 aa11.45□□□□□ -0.58
SHC1-202ENST00000368445 ZNF674Q2M3X9 581 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 LFNGQ8NES3 379 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 C2CD4CQ8TF44 421 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 LHX4Q969G2 390 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 AGMATQ9BSE5 352 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 CISD1Q9NZ45 108 aaKnown RBP11.44□□□□□ -0.58
SHC1-202ENST00000368445 MSRB2Q9Y3D2 182 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 KBTBD11-OT1A0A1B0GTJ5 212 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 NDUFB3O43676 98 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 MMP23AO75900 390 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 PLAUP00749 431 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 ARG1P05089 322 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 THBDP07204 575 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 OR9G9P0C7N8 305 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 DEFA4P12838 97 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 AWAT1Q58HT5 328 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 ODF3L1Q8IXM7 274 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 ABHD12Q8N2K0 398 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 ARV1Q9H2C2 271 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 TRAV3A0A0B4J244 114 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 OR8U8P0C7N1 319 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 NQO2P16083 231 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 CT45A1Q5HYN5 189 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 FAM122CQ6P4D5 195 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 ZNF525Q8N782 197 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 CT45A3Q8NHU0 189 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 URGCP-MRPS24S4R325 110 aa11.44□□□□□ -0.58
SHC1-202ENST00000368445 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.43□□□□□ -0.58
SHC1-202ENST00000368445 RAB29O14966 203 aa11.43□□□□□ -0.58
SHC1-202ENST00000368445 HPRT1P00492 218 aa11.43□□□□□ -0.58
SHC1-202ENST00000368445 CD5P06127 495 aa11.43□□□□□ -0.58
SHC1-202ENST00000368445 SLC25A6P12236 298 aa11.43□□□□□ -0.58
SHC1-202ENST00000368445 GRNP28799 593 aaKnown RBP11.43□□□□□ -0.58
SHC1-202ENST00000368445 OR5T1Q8NG75 326 aa11.43□□□□□ -0.58
SHC1-202ENST00000368445 OR10X1Q8NGY0 326 aa11.43□□□□□ -0.58
SHC1-202ENST00000368445 SAA2-SAA4A0A096LPE2 208 aa11.43□□□□□ -0.58
SHC1-202ENST00000368445 ENSAO43768 121 aaKnown RBP11.43□□□□□ -0.58
SHC1-202ENST00000368445 TSPAN9O75954 239 aa11.43□□□□□ -0.58
SHC1-202ENST00000368445 HBE1P02100 147 aa11.43□□□□□ -0.58
SHC1-202ENST00000368445 SAA2P0DJI9 122 aaPredicted RBP11.43□□□□□ -0.58
SHC1-202ENST00000368445 CIB3Q96Q77 187 aaPredicted RBP11.43□□□□□ -0.58
SHC1-202ENST00000368445 RAB7AP51149 207 aa11.43□□□□□ -0.58
SHC1-202ENST00000368445 BRWD1-AS2P59051 145 aa11.43□□□□□ -0.58
SHC1-202ENST00000368445 LY6DQ14210 128 aa11.43□□□□□ -0.58
SHC1-202ENST00000368445 TAF15Q92804 592 aaKnown RBP eCLIP11.43□□□□□ -0.58
SHC1-202ENST00000368445 GAFA1Q96PS6 74 aa11.43□□□□□ -0.58
SHC1-202ENST00000368445 TMEM140Q9NV12 185 aa11.43□□□□□ -0.58
SHC1-202ENST00000368445 C7orf77A4D0Y5 90 aa11.42□□□□□ -0.58
SHC1-202ENST00000368445 YPEL1O60688 119 aa11.42□□□□□ -0.58
SHC1-202ENST00000368445 PROP1O75360 226 aa11.42□□□□□ -0.58
SHC1-202ENST00000368445 LRRC10Q5BKY1 277 aa11.42□□□□□ -0.58
SHC1-202ENST00000368445 HAPLN4Q86UW8 402 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms