RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 PDCD11Q14690 1871 aaKnown RBP10.99□□□□□ -0.65
PTPRK-207ENST00000368226 RIPPLY2Q5TAB7 128 aa10.99□□□□□ -0.65
PTPRK-207ENST00000368226 OR9G1Q8NH87 305 aa10.99□□□□□ -0.65
PTPRK-207ENST00000368226 MYOZ3Q8TDC0 251 aa10.99□□□□□ -0.65
PTPRK-207ENST00000368226 TMEM106BQ9NUM4 274 aa10.99□□□□□ -0.65
PTPRK-207ENST00000368226 ELOVL5Q9NYP7 299 aa10.99□□□□□ -0.65
PTPRK-207ENST00000368226 PGA5P0DJD9 388 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 MFAP2P55001 183 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 FAM3BP58499 235 aaPredicted RBP10.98□□□□□ -0.65
PTPRK-207ENST00000368226 PGLYRP4Q96LB8 373 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 C5orf66Q9H5L9 145 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 HSPB7Q9UBY9 170 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 APC2O95996 2303 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 IGHMP01871 453 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 HKR1P10072 659 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 ASPHD2Q6ICH7 369 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 HSD17B13Q7Z5P4 300 aaPredicted RBP10.98□□□□□ -0.65
PTPRK-207ENST00000368226 NUP37Q8NFH4 326 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 TMEM56-RWDD3S4R434 201 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 UBE2L6O14933 153 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 CD1AP06126 327 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 TNFSF10P50591 281 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 MFAP4P55083 255 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 ZNF430Q9H8G1 570 aaPredicted RBP10.98□□□□□ -0.65
PTPRK-207ENST00000368226 ISLRO14498 428 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 NDUFA2O43678 99 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 MUC1P15941 1255 aaPredicted RBP10.98□□□□□ -0.65
PTPRK-207ENST00000368226 CEBPEQ15744 281 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 PACRGQ96M98 296 aaPredicted RBP10.98□□□□□ -0.65
PTPRK-207ENST00000368226 RARRES2Q99969 163 aa10.98□□□□□ -0.65
PTPRK-207ENST00000368226 PROB1E7EW31 1015 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 CORTO00230 105 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 SEC11BP0C7V7 166 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 BCL2P10415 239 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 KIR2DL2P43627 348 aaPredicted RBP10.97□□□□□ -0.65
PTPRK-207ENST00000368226 FAM74A4Q5TZK3 123 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 PQLC2Q6ZP29 291 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 DRAM1Q8N682 238 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 SSBP3Q9BWW4 388 aaPredicted RBP10.97□□□□□ -0.65
PTPRK-207ENST00000368226 RP1P56715 2156 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 ARL14EPLP0DKL9 152 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 MAS1LP35410 378 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 SRSF9Q13242 221 aaKnown RBP eCLIP10.97□□□□□ -0.65
PTPRK-207ENST00000368226 ZNF343Q6P1L6 599 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 SGMS2Q8NHU3 365 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 ZNF502Q8TBZ5 544 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 REPIN1Q9BWE0 567 aaKnown RBP10.97□□□□□ -0.65
PTPRK-207ENST00000368226 ARID2Q68CP9 1835 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 LYNX1G3V0Z9 82 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 LYNX1P0DP58 116 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 C1orf100Q5SVJ3 147 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 OR4C12Q96R67 309 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 AP4M1O00189 453 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 HERVK_113P61574 105 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 FAM57AQ8TBR7 257 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 VN1R17PQ8TDU5 208 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 DDB2Q92466 427 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 JPT1Q9UK76 154 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 A0A1W2PS18 150 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 TNFRSF9Q07011 255 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 TIMM23BQ5SRD1 257 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 NEU1Q99519 415 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 FBXL15Q9H469 300 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 ABCA7Q8IZY2 2146 aa10.97□□□□□ -0.65
PTPRK-207ENST00000368226 H3BVH4 76 aa10.96□□□□□ -0.65
PTPRK-207ENST00000368226 WDFY1Q8IWB7 410 aa10.96□□□□□ -0.65
PTPRK-207ENST00000368226 SIPA1L1O43166 1804 aa10.96□□□□□ -0.65
PTPRK-207ENST00000368226 IGHV2OR16-5A0A0B4J2B6 119 aa10.96□□□□□ -0.65
PTPRK-207ENST00000368226 IGKV1D-33P01593 117 aa10.96□□□□□ -0.65
PTPRK-207ENST00000368226 IGKV1-33P01594 117 aa10.96□□□□□ -0.65
PTPRK-207ENST00000368226 ZNF708P17019 499 aa10.96□□□□□ -0.65
PTPRK-207ENST00000368226 NMUP48645 174 aa10.96□□□□□ -0.65
PTPRK-207ENST00000368226 SMUG1Q53HV7 270 aa10.96□□□□□ -0.65
PTPRK-207ENST00000368226 C10orf128Q5T292 105 aa10.96□□□□□ -0.65
PTPRK-207ENST00000368226 NPIPB3Q92617 1050 aa10.96□□□□□ -0.65
PTPRK-207ENST00000368226 TP53RKQ96S44 253 aa10.96□□□□□ -0.65
PTPRK-207ENST00000368226 TMEM191AQ9H0A3 160 aa10.96□□□□□ -0.65
PTPRK-207ENST00000368226 MDC1Q14676 2089 aaKnown RBP10.96□□□□□ -0.65
PTPRK-207ENST00000368226 DLX1P56177 255 aa10.96□□□□□ -0.65
PTPRK-207ENST00000368226 FAM106AQ4KMX7 169 aa10.96□□□□□ -0.65
PTPRK-207ENST00000368226 IBA57Q5T440 356 aaKnown RBP10.96□□□□□ -0.65
PTPRK-207ENST00000368226 ACP7Q6ZNF0 438 aa10.96□□□□□ -0.65
PTPRK-207ENST00000368226 OR4C13Q8NGP0 309 aa10.96□□□□□ -0.65
PTPRK-207ENST00000368226 TAF15Q92804 592 aaKnown RBP eCLIP10.96□□□□□ -0.658e-7■□□□□ 10.9
PTPRK-207ENST00000368226 PSME4Q14997 1843 aa10.96□□□□□ -0.66
PTPRK-207ENST00000368226 HOXA6P31267 233 aa10.96□□□□□ -0.66
PTPRK-207ENST00000368226 OTOFQ9HC10 1997 aa10.96□□□□□ -0.66
PTPRK-207ENST00000368226 PINLYPA6NC86 204 aa10.96□□□□□ -0.66
PTPRK-207ENST00000368226 ZNF729A6NN14 1252 aaPredicted RBP10.96□□□□□ -0.66
PTPRK-207ENST00000368226 M0R3E3 92 aa10.96□□□□□ -0.66
PTPRK-207ENST00000368226 SPTBP11277 2137 aa10.96□□□□□ -0.66
PTPRK-207ENST00000368226 HOXB1P14653 301 aaPredicted RBP10.96□□□□□ -0.66
PTPRK-207ENST00000368226 AREGP15514 252 aa10.96□□□□□ -0.66
PTPRK-207ENST00000368226 PAM16Q9Y3D7 125 aa10.96□□□□□ -0.66
PTPRK-207ENST00000368226 TRGV3P03979 118 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 CD24P25063 80 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 PTGDSP41222 190 aa10.95□□□□□ -0.66
PTPRK-207ENST00000368226 HSPE1P61604 102 aaKnown RBP10.95□□□□□ -0.66
PTPRK-207ENST00000368226 WDR25Q64LD2 544 aaPredicted RBP10.95□□□□□ -0.66
PTPRK-207ENST00000368226 OR1N2Q8NGR9 330 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms