RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 NAPSAO96009 420 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 FABP1P07148 127 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 SRSF4Q08170 494 aaKnown RBP7.13□□□□□ -1.27
PTPRK-206ENST00000368215 WDR25Q64LD2 544 aaPredicted RBP7.13□□□□□ -1.27
PTPRK-206ENST00000368215 ZNF324BQ6AW86 544 aaPredicted RBP7.13□□□□□ -1.27
PTPRK-206ENST00000368215 OR10A7Q8NGE5 316 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 FAM103A1Q9BTL3 118 aaKnown RBP7.13□□□□□ -1.27
PTPRK-206ENST00000368215 QTRT1Q9BXR0 403 aaKnown RBP7.13□□□□□ -1.27
PTPRK-206ENST00000368215 MANBALQ9NQG1 85 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 TMEM140Q9NV12 185 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 ZNF835Q9Y2P0 537 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 GTF3C1Q12789 2109 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 XKRY2A2RUG3 117 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 C19orf67A6NJJ6 358 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 J3QW42 95 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 TGOLN2O43493 480 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 PSPNO60542 156 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 CD55P08174 381 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 ORM2P19652 201 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 HOXA4Q00056 320 aaPredicted RBP7.13□□□□□ -1.27
PTPRK-206ENST00000368215 OR2T10Q8NGZ9 312 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 BLNKQ8WV28 456 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 IFT22Q9H7X7 185 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 ZNF331Q9NQX6 463 aaPredicted RBP7.13□□□□□ -1.27
PTPRK-206ENST00000368215 PPIHO43447 177 aaKnown RBP7.13□□□□□ -1.27
PTPRK-206ENST00000368215 SCGB2A1O75556 95 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 OR4A8P0C604 315 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 FAM157CP0CG43 387 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 NTF3P20783 257 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 ID3Q02535 119 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 C16orf82Q7Z2V1 217 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 ZCCHC24Q8N2G6 241 aaKnown RBP7.13□□□□□ -1.27
PTPRK-206ENST00000368215 MDS2Q8NDY4 140 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 RPEQ96AT9 228 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 WDR61Q9GZS3 305 aaKnown RBP7.13□□□□□ -1.27
PTPRK-206ENST00000368215 PRO1933Q9H354 126 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 TUBG2Q9NRH3 451 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 OR51B2Q9Y5P1 312 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 PXMP4Q9Y6I8 212 aa7.13□□□□□ -1.27
PTPRK-206ENST00000368215 ATXN7O15265 892 aaPredicted RBP7.12□□□□□ -1.27
PTPRK-206ENST00000368215 CD3EP07766 207 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 TCL1AP56279 114 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 BPIFB3P59826 476 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 TNXAQ16473 311 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 DPPA3Q6W0C5 159 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 ZNF497Q6ZNH5 498 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 SLC24A4Q8NFF2 622 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 FAM216AQ8WUB2 273 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 SMDT1Q9H4I9 107 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 USF3Q68DE3 2245 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 PPIAL4EA0A075B759 164 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 PPIAL4DF5H284 164 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 SS18L1O75177 396 aaPredicted RBP7.12□□□□□ -1.27
PTPRK-206ENST00000368215 DKK1O94907 266 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 NDUFB4O95168 129 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 PPIAL4FP0DN26 164 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 RPS2P15880 293 aaKnown RBP7.12□□□□□ -1.27
PTPRK-206ENST00000368215 CHRNB4P30926 498 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 SPCS3P61009 180 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 HERPUD1Q15011 391 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 TEPPQ6URK8 271 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 WDR82Q6UXN9 313 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 LRP11Q86VZ4 500 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 LRTM2Q8N967 370 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 MEGF10Q96KG7 1140 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 SLC45A2Q9UMX9 530 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 PPIAL4AQ9Y536 164 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 IGHV3-48P01763 117 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 TFF3Q07654 80 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 TGIF2LYQ8IUE0 185 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 TGIF2LXQ8IUE1 241 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 FAM216BQ8N7L0 139 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 CA5BP1Q8WTZ4 195 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 FLYWCH2Q96CP2 140 aaKnown RBP7.12□□□□□ -1.27
PTPRK-206ENST00000368215 SIRT7Q9NRC8 400 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 FUT9Q9Y231 359 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 B4DEV8 164 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 FAM157AC9JC47 383 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 FAM90A26D6RGX4 464 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 K7N7A8 449 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 LY86O95711 162 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 RBP4P02753 201 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 GNG4P50150 75 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 TMEM18Q96B42 140 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 PRNDQ9UKY0 176 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 AUP1Q9Y679 476 aa7.12□□□□□ -1.27
PTPRK-206ENST00000368215 INTS1Q8N201 2190 aaKnown RBP7.11□□□□□ -1.27
PTPRK-206ENST00000368215 CEACAM18A8MTB9 384 aa7.11□□□□□ -1.27
PTPRK-206ENST00000368215 TMEM11P17152 192 aa7.11□□□□□ -1.27
PTPRK-206ENST00000368215 KIR2DL2P43627 348 aaPredicted RBP7.11□□□□□ -1.27
PTPRK-206ENST00000368215 LINC00205P59089 165 aa7.11□□□□□ -1.27
PTPRK-206ENST00000368215 UBE2L3P68036 154 aaKnown RBP7.11□□□□□ -1.27
PTPRK-206ENST00000368215 ZNF705AQ6ZN79 300 aaPredicted RBP7.11□□□□□ -1.27
PTPRK-206ENST00000368215 ZNF525Q8N782 197 aa7.11□□□□□ -1.27
PTPRK-206ENST00000368215 CTDSP1Q9GZU7 261 aa7.11□□□□□ -1.27
PTPRK-206ENST00000368215 FKBP11Q9NYL4 201 aa7.11□□□□□ -1.27
PTPRK-206ENST00000368215 MIOXQ9UGB7 285 aa7.11□□□□□ -1.27
PTPRK-206ENST00000368215 TCF19Q9Y242 345 aa7.11□□□□□ -1.27
PTPRK-206ENST00000368215 SRP19P09132 144 aaKnown RBP7.11□□□□□ -1.27
PTPRK-206ENST00000368215 SELLP14151 372 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms