RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 SMIM8Q96KF7 97 aa11.39□□□□□ -0.59
PTPRK-204ENST00000368210 PAGE4O60829 102 aa11.39□□□□□ -0.59
PTPRK-204ENST00000368210 PSMB2P49721 201 aa11.39□□□□□ -0.59
PTPRK-204ENST00000368210 SERF2P84101 59 aa11.39□□□□□ -0.59
PTPRK-204ENST00000368210 MEF2BQ02080 365 aaPredicted RBP11.39□□□□□ -0.59
PTPRK-204ENST00000368210 SEBOXQ9HB31 216 aaPredicted RBP11.39□□□□□ -0.59
PTPRK-204ENST00000368210 LOC101059948A0A1B0GTJ6 334 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 A0A1W2PRS3 328 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 LINC00271P0C7V0 271 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 ACP1P24666 158 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 TCL1AP56279 114 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 COL10A1Q03692 680 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 ATP1A1-AS1Q5TC04 95 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 NFAM1Q8NET5 270 aaPredicted RBP11.38□□□□□ -0.59
PTPRK-204ENST00000368210 LYPD3O95274 346 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 HLA-DQA1P01909 254 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 CEACAM3P40198 252 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 ACSM6Q6P461 480 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 OR2H2O95918 312 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 HKR1P10072 659 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 LCN2P80188 198 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 MRPL14Q6P1L8 145 aaKnown RBP11.38□□□□□ -0.59
PTPRK-204ENST00000368210 Q8WTZ3 238 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 MRPL18Q9H0U6 180 aaKnown RBP11.38□□□□□ -0.59
PTPRK-204ENST00000368210 LDLRAD4O15165 306 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 GDF9O60383 454 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 FNDC7Q5VTL7 733 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 IMMP1LQ96LU5 166 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 RARRES2Q99969 163 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 TMEM222Q9H0R3 208 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 C5orf66Q9H5L9 145 aa11.38□□□□□ -0.59
PTPRK-204ENST00000368210 BARX1Q9HBU1 254 aaPredicted RBP11.38□□□□□ -0.59
PTPRK-204ENST00000368210 AMMECR1Q9Y4X0 333 aaPredicted RBP11.38□□□□□ -0.59
PTPRK-204ENST00000368210 MGST3O14880 152 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 ADRA2AP08913 450 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 TFPI2P48307 235 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 SMAGPQ0VAQ4 97 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 UBE2V1Q13404 147 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 ANKRD55Q3KP44 614 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 HEPN1Q6WQI6 88 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 NUDT3O95989 172 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 ZNF883P0CG24 379 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 ID4P47928 161 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 TMEM136Q6ZRR5 245 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 CISD1Q9NZ45 108 aaKnown RBP11.37□□□□□ -0.59
PTPRK-204ENST00000368210 CCL8P80075 99 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 C1orf194Q5T5A4 169 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 ZNF826PQ6ZT77 177 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 TMEM252Q8N6L7 170 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 VCX2Q9H322 139 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 TUBD1Q9UJT1 453 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 H0Y980 276 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 ZIC3O60481 467 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 TDGF1P3P51864 188 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 CKS1BP61024 79 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 KHDC1LQ5JSQ8 128 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 NR2C2APQ86WQ0 139 aa11.37□□□□□ -0.59
PTPRK-204ENST00000368210 HBZP02008 142 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 ZNF506Q5JVG8 444 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 OR8G5Q8NG78 346 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 DLL3Q9NYJ7 618 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 JKAMPQ9P055 326 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 PRNDQ9UKY0 176 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 ZNF256Q9Y2P7 627 aaPredicted RBP11.36□□□□□ -0.59
PTPRK-204ENST00000368210 CLDN14O95500 239 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 RPL31P62899 125 aaKnown RBP11.36□□□□□ -0.59
PTPRK-204ENST00000368210 TNXAQ16473 311 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 KRTCAP3Q53RY4 240 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 ORAOV1Q8WV07 137 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 SOX21Q9Y651 276 aaPredicted RBP11.36□□□□□ -0.59
PTPRK-204ENST00000368210 TRBV9A0A0B4J1U6 114 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 PRSS1P07477 247 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 UNC119Q13432 240 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 SSX8Q7RTT4 187 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 SSMEM1Q8WWF3 244 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 ANAPC13Q9BS18 74 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 ZNF646O15015 1829 aaPredicted RBP11.36□□□□□ -0.59
PTPRK-204ENST00000368210 SAXO1Q8IYX7 474 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 OR8B3Q8NGG8 313 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 HARBI1Q96MB7 349 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 OR2V2Q96R30 315 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 TXNDC17Q9BRA2 123 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 RTN4RQ9BZR6 473 aa11.36□□□□□ -0.59
PTPRK-204ENST00000368210 CACNA1GO43497 2377 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 SNCGO76070 127 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 CSN3P07498 182 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 ERASQ7Z444 233 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 SIGLEC12Q96PQ1 595 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 TIMP4Q99727 224 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 SPCS1Q9Y6A9 102 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 TMEM238LA0A1B0GVL6 79 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 A6NJY4 79 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 K7ESF4 209 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 FGF16O43320 207 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 SLC25A5P05141 298 aaKnown RBP11.35□□□□□ -0.59
PTPRK-204ENST00000368210 OR1L4Q8NGR5 311 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 CITED1Q99966 193 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 AAMDCQ9H7C9 122 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 TMEM167BQ9NRX6 74 aa11.35□□□□□ -0.59
PTPRK-204ENST00000368210 THSD7BQ9C0I4 1608 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms