RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ZNF573Q86YE8 665 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 OR56B2PQ8NGI1 322 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 OR10V1Q8NGI7 309 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 OR4X1Q8NH49 305 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 OR10J5Q8NHC4 309 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 ALKBH3Q96Q83 286 aaPredicted RBP9.69□□□□□ -0.86
USF1-201ENST00000368019 OR5B12Q96R08 314 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 IMMP2LQ96T52 175 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 MRPL37Q9BZE1 423 aaKnown RBP9.69□□□□□ -0.86
USF1-201ENST00000368019 ZNF703Q9H7S9 590 aaPredicted RBP9.69□□□□□ -0.86
USF1-201ENST00000368019 RFNGQ9Y644 331 aa9.69□□□□□ -0.86
USF1-201ENST00000368019 A0A0G2JRQ6 117 aa9.68□□□□□ -0.86
USF1-201ENST00000368019 ZFP92A6NM28 416 aa9.68□□□□□ -0.86
USF1-201ENST00000368019 PPP5D1E7EU14 171 aa9.68□□□□□ -0.86
USF1-201ENST00000368019 J3QW42 95 aa9.68□□□□□ -0.86
USF1-201ENST00000368019 GGCTO75223 188 aaKnown RBP9.68□□□□□ -0.86
USF1-201ENST00000368019 HRASP01112 189 aa9.68□□□□□ -0.86
USF1-201ENST00000368019 CEACAM8P31997 349 aaPredicted RBP9.68□□□□□ -0.86
USF1-201ENST00000368019 CEBPGP53567 150 aa9.68□□□□□ -0.86
USF1-201ENST00000368019 LCN2P80188 198 aa9.68□□□□□ -0.86
USF1-201ENST00000368019 MEF2BQ02080 365 aaPredicted RBP9.68□□□□□ -0.86
USF1-201ENST00000368019 FBXL19-AS1Q494R0 122 aa9.68□□□□□ -0.86
USF1-201ENST00000368019 MRPL21Q7Z2W9 205 aaKnown RBP9.68□□□□□ -0.86
USF1-201ENST00000368019 TAF15Q92804 592 aaKnown RBP eCLIP9.68□□□□□ -0.86
USF1-201ENST00000368019 NDUFAF3Q9BU61 184 aa9.68□□□□□ -0.86
USF1-201ENST00000368019 B4GALT7Q9UBV7 327 aa9.68□□□□□ -0.86
USF1-201ENST00000368019 PRSS50Q9UI38 385 aa9.68□□□□□ -0.86
USF1-201ENST00000368019 ABCA2Q9BZC7 2435 aa9.68□□□□□ -0.86
USF1-201ENST00000368019 MED12LQ86YW9 2145 aa9.68□□□□□ -0.86
USF1-201ENST00000368019 NSD1Q96L73 2696 aaPredicted RBP9.68□□□□□ -0.86
USF1-201ENST00000368019 CEBPZOSA8MTT3 80 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 H7BYZ3 331 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 ZNF737O75373 536 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 AMBPP02760 352 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 PGA5P0DJD9 388 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 NTF4P34130 210 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 ARR3P36575 388 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 PSMB3P49720 205 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 BSXQ3C1V8 233 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 GFI1BQ5VTD9 330 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 CDPF1Q6NVV7 123 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 C16orf82Q7Z2V1 217 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 P4HA3Q7Z4N8 544 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 HAPLN4Q86UW8 402 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 Q8IYB0 196 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 LILRB2Q8N423 598 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 NAXEQ8NCW5 288 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 OR51G1Q8NGK1 321 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 OR10D3Q8NH80 312 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 NEK7Q8TDX7 302 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 JSRP1Q96MG2 331 aaPredicted RBP9.67□□□□□ -0.86
USF1-201ENST00000368019 HIST1H2AAQ96QV6 131 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 SMIM7Q9BQ49 75 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 TXNDC17Q9BRA2 123 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 RSG1Q9BU20 258 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 TMEM147Q9BVK8 224 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 FGF23Q9GZV9 251 aaPredicted RBP9.67□□□□□ -0.86
USF1-201ENST00000368019 SLC39A9Q9NUM3 307 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 MTCH1Q9NZJ7 389 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 CRIM1Q9NZV1 1036 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 CACNG5Q9UF02 275 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 BOKQ9UMX3 212 aaPredicted RBP9.67□□□□□ -0.86
USF1-201ENST00000368019 VPS13CQ709C8 3753 aa9.67□□□□□ -0.86
USF1-201ENST00000368019 A8MWP6 167 aa9.66□□□□□ -0.86
USF1-201ENST00000368019 AHRRA9YTQ3 701 aa9.66□□□□□ -0.86
USF1-201ENST00000368019 CXCL13O43927 109 aa9.66□□□□□ -0.86
USF1-201ENST00000368019 HLA-HP01893 362 aa9.66□□□□□ -0.86
USF1-201ENST00000368019 PSG2P11465 335 aa9.66□□□□□ -0.86
USF1-201ENST00000368019 SPCS3P61009 180 aa9.66□□□□□ -0.86
USF1-201ENST00000368019 RPL23P62829 140 aaKnown RBP9.66□□□□□ -0.86
USF1-201ENST00000368019 GNG3P63215 75 aa9.66□□□□□ -0.86
USF1-201ENST00000368019 TMEM267Q0VDI3 215 aaPredicted RBP9.66□□□□□ -0.86
USF1-201ENST00000368019 VWC2Q2TAL6 325 aa9.66□□□□□ -0.86
USF1-201ENST00000368019 ACTL10Q5JWF8 245 aa9.66□□□□□ -0.86
USF1-201ENST00000368019 LCN15Q6UWW0 184 aa9.66□□□□□ -0.86
USF1-201ENST00000368019 CPEB3Q8NE35 698 aaKnown RBP9.66□□□□□ -0.86
USF1-201ENST00000368019 FGFBP3Q8TAT2 258 aa9.66□□□□□ -0.86
USF1-201ENST00000368019 OR5P3Q8WZ94 311 aa9.66□□□□□ -0.86
USF1-201ENST00000368019 LHX4Q969G2 390 aa9.66□□□□□ -0.86
USF1-201ENST00000368019 TMEM18Q96B42 140 aa9.66□□□□□ -0.86
USF1-201ENST00000368019 MBD6Q96DN6 1003 aa9.66□□□□□ -0.86
USF1-201ENST00000368019 A6NNC1 897 aa9.65□□□□□ -0.86
USF1-201ENST00000368019 IGKV1-39P01597 117 aa9.65□□□□□ -0.86
USF1-201ENST00000368019 IGKV1-5P01602 117 aa9.65□□□□□ -0.86
USF1-201ENST00000368019 IGKV1D-39P04432 117 aa9.65□□□□□ -0.86
USF1-201ENST00000368019 GZMBP10144 247 aa9.65□□□□□ -0.86
USF1-201ENST00000368019 TIMP3P35625 211 aa9.65□□□□□ -0.86
USF1-201ENST00000368019 GALR1P47211 349 aa9.65□□□□□ -0.86
USF1-201ENST00000368019 SLC38A11Q08AI6 406 aa9.65□□□□□ -0.86
USF1-201ENST00000368019 ARL16Q0P5N6 197 aa9.65□□□□□ -0.86
USF1-201ENST00000368019 PDCD1Q15116 288 aa9.65□□□□□ -0.86
USF1-201ENST00000368019 KCNIP4Q6PIL6 250 aa9.65□□□□□ -0.86
USF1-201ENST00000368019 FAM58AQ8N1B3 248 aa9.65□□□□□ -0.86
USF1-201ENST00000368019 FAM222BQ8WU58 562 aa9.65□□□□□ -0.86
USF1-201ENST00000368019 FAM216AQ8WUB2 273 aa9.65□□□□□ -0.86
USF1-201ENST00000368019 RNASE6Q93091 150 aaKnown RBP9.65□□□□□ -0.86
USF1-201ENST00000368019 SNX22Q96L94 193 aa9.65□□□□□ -0.86
USF1-201ENST00000368019 CIB3Q96Q77 187 aaPredicted RBP9.65□□□□□ -0.86
USF1-201ENST00000368019 OR4C12Q96R67 309 aa9.65□□□□□ -0.86
USF1-201ENST00000368019 DIRC2Q96SL1 478 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms