RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 TCF23Q7RTU1 214 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 ADAD2Q8NCV1 583 aaKnown RBP7.7□□□□□ -1.18
SYNE1-209ENST00000367257 FOXQ1Q9C009 403 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 LOC107984156A0A0G2JMH3 177 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 A8MWP6 167 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 CD160O95971 181 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 C8orf88P0DMB2 117 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 PTGDSP41222 190 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 MFAP2P55001 183 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 H2BFSP57053 126 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 SLC35B1P78383 322 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 PAX2Q02962 417 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 EBLN2Q6P2I7 272 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 ARL17AQ8IVW1 177 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 GATAD1Q8WUU5 269 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 TIMP4Q99727 224 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 MRPL18Q9H0U6 180 aaKnown RBP7.7□□□□□ -1.18
SYNE1-209ENST00000367257 DTX4Q9Y2E6 619 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 CEACAM18A8MTB9 384 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 C16orf97H3BN30 126 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 SS18L1O75177 396 aaPredicted RBP7.7□□□□□ -1.18
SYNE1-209ENST00000367257 LEPROTL1O95214 131 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 FTH1P19P0C7X4 201 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 PRDX2P32119 198 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 ZNF146Q15072 292 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 MMDQ15546 238 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 METTL26Q96S19 204 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 ATP6V0BQ99437 205 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 PRSS27Q9BQR3 290 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 G6PC2Q9NQR9 355 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 A0A1B0GTH9 108 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 ZP1P60852 638 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 HSPE1P61604 102 aaKnown RBP7.7□□□□□ -1.18
SYNE1-209ENST00000367257 ADIPOQQ15848 244 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 C19orf54Q5BKX5 351 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 SLC35E4Q6ICL7 350 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 ATOH7Q8N100 152 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 OR1N2Q8NGR9 330 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 NEUROG1Q92886 237 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 ZSWIM8A7E2V4 1837 aa7.7□□□□□ -1.18
SYNE1-209ENST00000367257 IGHV3-43A0A0B4J1X8 118 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 CDIPTO14735 213 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 TSPAN13O95857 204 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 FAM106CPP0CH98 169 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 IGHV3-43DP0DP04 118 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 SCGB1A1P11684 91 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 COX7A1P24310 79 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 ZFAND6Q6FIF0 208 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 MOGAT3Q86VF5 341 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 DNASE2BQ8WZ79 361 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 C5orf30Q96GV9 206 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 KCNK17Q96T54 332 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 RBKSQ9H477 322 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 SLC25A10Q9UBX3 287 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-209ENST00000367257 CITO14578 2027 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 TSPAN2O60636 221 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 CXorf67Q86X51 503 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-209ENST00000367257 TUSC5Q8IXB3 177 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 OR4A5Q8NH83 315 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 TMPRSS2O15393 492 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 LYZL6O75951 148 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 MPZL1O95297 269 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 RPL8P62917 257 aaKnown RBP7.69□□□□□ -1.18
SYNE1-209ENST00000367257 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-209ENST00000367257 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-209ENST00000367257 SSMEM1Q8WWF3 244 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 SMOC1Q9H4F8 434 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 WBP1LQ9NX94 342 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 SHISA8B8ZZ34 492 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 GCM2O75603 506 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-209ENST00000367257 CSN3P07498 182 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 RPS4XP62701 263 aaKnown RBP7.69□□□□□ -1.18
SYNE1-209ENST00000367257 EIF4EBP2Q13542 120 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-209ENST00000367257 HEPN1Q6WQI6 88 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 OR8A1Q8NGG7 326 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 QTRT1Q9BXR0 403 aaKnown RBP7.69□□□□□ -1.18
SYNE1-209ENST00000367257 CST9LQ9H4G1 147 aa7.69□□□□□ -1.18
SYNE1-209ENST00000367257 LAMA2P24043 3122 aaKnown RBP7.68□□□□□ -1.18
SYNE1-209ENST00000367257 IGLV1-36A0A0B4J1U3 117 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 H3BUT2 72 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 RBFOX2O43251 390 aaKnown RBP eCLIP7.68□□□□□ -1.18
SYNE1-209ENST00000367257 LMX1BO60663 402 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 UMODP07911 640 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 MFAP4P55083 255 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 HES3Q5TGS1 186 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 DNM1P46Q6ZS02 220 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 PRSS41Q7RTY9 318 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 LINC00470Q9BZP3 86 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 GEMIN7Q9H840 131 aaKnown RBP7.68□□□□□ -1.18
SYNE1-209ENST00000367257 SEMA5BQ9P283 1151 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 KLF2Q9Y5W3 355 aaPredicted RBP7.68□□□□□ -1.18
SYNE1-209ENST00000367257 DIDO1Q9BTC0 2240 aaKnown RBP7.68□□□□□ -1.18
SYNE1-209ENST00000367257 KIAA1217Q5T5P2 1943 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 A0A1W2PQM1 296 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 TMEM262E9PQX1 116 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 C10orf128Q5T292 105 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 FAM90A1Q86YD7 464 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 C9orf40Q8IXQ3 194 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 LRRC75AQ8NAA5 344 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 PLA2G3Q9NZ20 509 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms