RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 CAMPP49913 170 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 SPSB3Q6PJ21 355 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 LILRA3Q8N6C8 439 aaPredicted RBP3.23□□□□□ -1.89
SYNE1-207ENST00000367255 TMEM50AO95807 157 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 PPYP01298 95 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 CD46P15529 392 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 COLCA1Q6ZS62 124 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 OR2K2Q8NGT1 345 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 CLDN23Q96B33 292 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 KLK13Q9UKR3 277 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 A0A1B0GTL3 188 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 COLCA2A8K830 154 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 E9PQ18 207 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 FOXA3P55318 350 aaPredicted RBP3.23□□□□□ -1.89
SYNE1-207ENST00000367255 OCIAD2Q56VL3 154 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 A0A1W2PPI3 338 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 ERVH48-1M5A8F1 160 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 NDUFB8O95169 186 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 IGHV2-5P01817 119 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 TDHQ8IZJ6 230 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 GAGE12JA6NER3 117 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 GAGE7O76087 117 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 GAGE12FP0CL80 117 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 GAGE12GP0CL81 117 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 GAGE12IP0CL82 117 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 HLA-DMBP28068 263 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 GAGE4Q13068 117 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 SP6Q3SY56 376 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 PIFOQ8TCI5 191 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 LOC105371267A0A1B0GV96 52 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 LHX8Q68G74 356 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 C16orf54Q6UWD8 224 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 Q6ZVU0 165 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 VKORC1L1Q8N0U8 176 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 TTC9CQ8N5M4 171 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 TM4SF18Q96CE8 201 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 ALG14Q96F25 216 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 MYO18BQ8IUG5 2567 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 PVRIGQ6DKI7 326 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 SYT8Q8NBV8 401 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 FITM1A5D6W6 292 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF815PA8K554 130 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 PPP1R3DO95685 299 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 C8orf88P0DMB2 117 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 C3AR1Q16581 482 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 GGTLC1Q9BX51 225 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 IL17BQ9UHF5 180 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 H3BMG7 143 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 CBLN1P23435 193 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 Q8NFD4 153 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 ELOVL5Q9NYP7 299 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 LGALS1P09382 135 aaKnown RBP3.23□□□□□ -1.89
SYNE1-207ENST00000367255 TBR1Q16650 682 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 TAF15Q92804 592 aaKnown RBP eCLIP3.23□□□□□ -1.89
SYNE1-207ENST00000367255 SPACA5Q96QH8 159 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 NOXO1Q8NFA2 376 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 SEMA5BQ9P283 1151 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 RPRMLQ8N4K4 120 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 C11orf68Q9H3H3 251 aaKnown RBP3.23□□□□□ -1.89
SYNE1-207ENST00000367255 hCG_38984A0A1B0GV85 526 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 TMEM171Q8WVE6 324 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 SLC50A1Q9BRV3 221 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 RPS15P62841 145 aaKnown RBP3.23□□□□□ -1.89
SYNE1-207ENST00000367255 FAM27D1Q5T7N8 215 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 SFTPA2Q8IWL1 248 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 SFTPA1Q8IWL2 248 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 CACNA1BQ00975 2339 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 MS4A18H0YCH9 400 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 KLKB1P03952 638 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 EGR4Q05215 589 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 MS4A18Q3C1V0 323 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 BPESC1Q9GZL8 116 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 ZNF492Q9P255 531 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 TRAV5A0A0B4J249 113 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 TSPO2Q5TGU0 170 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 PRR18Q8N4B5 295 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 C5orf67F2Z3F1 127 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 LINC01619G3V211 115 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 P2RY4P51582 365 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 INO80CQ6PI98 192 aaPredicted RBP3.23□□□□□ -1.89
SYNE1-207ENST00000367255 TRAV8-6A0A0B4J262 113 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 GCSAMLQ5JQS6 135 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 SNRNP40Q96DI7 357 aaKnown RBP3.23□□□□□ -1.89
SYNE1-207ENST00000367255 HIST1H2BLQ99880 126 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 PSENENQ9NZ42 101 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 HIST1H2BKO60814 126 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 HIST1H2BJP06899 126 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 HIST1H2BOP23527 126 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 HIST1H2BBP33778 126 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 HIST1H2BDP58876 126 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 HIST1H2BCP62807 126 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 MRPS11P82912 194 aaKnown RBP3.23□□□□□ -1.89
SYNE1-207ENST00000367255 HIST2H2BEQ16778 126 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.23□□□□□ -1.89
SYNE1-207ENST00000367255 HIST1H2BHQ93079 126 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 HIST1H2BNQ99877 126 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 HIST1H2BMQ99879 126 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 MRPL18Q9H0U6 180 aaKnown RBP3.23□□□□□ -1.89
SYNE1-207ENST00000367255 LPAR5Q9H1C0 372 aa3.23□□□□□ -1.89
SYNE1-207ENST00000367255 ZFP92A6NM28 416 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms