RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ABCG5Q9H222 651 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 MIXL1Q9H2W2 232 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 NCOR1P1Q9H4R4 102 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 SPACA1Q9HBV2 294 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 SIRT7Q9NRC8 400 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 PTTG2Q9NZH5 202 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 ZNRD1Q9P1U0 126 aa6.2□□□□□ -1.42
YBX3-204ENST00000366290 ELF5Q9UKW6 265 aaPredicted RBP6.2□□□□□ -1.42
YBX3-204ENST00000366290 VWFP04275 2813 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 A0A1W2PPQ1 181 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 TMEM30CPA0ZSE6 113 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 CCDC160A6NGH7 325 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 MCRIP1C9JLW8 97 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 C15orf65H3BRN8 121 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 BUB3O43684 328 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 HPGDSO60760 199 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 NOL3O60936 208 aaKnown RBP6.19□□□□□ -1.42
YBX3-204ENST00000366290 MMP23AO75900 390 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 IGHV4-59P01825 116 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 ZNF728P0DKX0 622 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 HIST1H1DP16402 221 aaKnown RBP6.19□□□□□ -1.42
YBX3-204ENST00000366290 GNB3P16520 340 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 CDK2P24941 298 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 PRB3Q04118 309 aaPredicted RBP6.19□□□□□ -1.42
YBX3-204ENST00000366290 UBE2NLQ5JXB2 153 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 UTF1Q5T230 341 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 ZNF880Q6PDB4 577 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 BAIAP2L2Q6UXY1 529 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 PDZD9Q8IXQ8 264 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 C3orf56Q8N813 242 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 SAMD12Q8N8I0 201 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 NEK7Q8TDX7 302 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 ACOT12Q8WYK0 555 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 DGCR14Q96DF8 476 aaKnown RBP6.19□□□□□ -1.42
YBX3-204ENST00000366290 RAB3CQ96E17 227 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 NEDD4LQ96PU5 975 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 DCUN1D5Q9BTE7 237 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 ATG5Q9H1Y0 275 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 HEXA-AS1Q9H8Q6 139 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 LINC00574Q9H8X3 128 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 PLEKHJ1Q9NW61 149 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 NDUFA13Q9P0J0 144 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 COMMD3Q9UBI1 195 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 AK3Q9UIJ7 227 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 LINC00312Q9Y6C7 94 aa6.19□□□□□ -1.42
YBX3-204ENST00000366290 PRKDCP78527 4128 aaKnown RBP6.18□□□□□ -1.42
YBX3-204ENST00000366290 A0A075B6Q4 140 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 MEIKINA0A087WXM9 373 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 TRBV6-6A0A0A6YYG2 114 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 A0A0A6YYH2 397 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 hADV38S2A0JD32 116 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 MEIOCA2RUB1 952 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 METTL21EPA6NDL7 271 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 A6NJ64 397 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 VGLL3A8MV65 326 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 ODF3BA8MYP8 253 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 SSX5O60225 188 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 CA11O75493 328 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 APOA1P02647 267 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 PTHLHP12272 177 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 RCC1P18754 421 aaPredicted RBP6.18□□□□□ -1.42
YBX3-204ENST00000366290 ELK1P19419 428 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 SSTR5P35346 364 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 KLRD1Q13241 179 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 RBM39Q14498 530 aaKnown RBP6.18□□□□□ -1.42
YBX3-204ENST00000366290 PRR27Q6MZM9 219 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 FAM53AQ6NSI3 398 aaPredicted RBP6.18□□□□□ -1.42
YBX3-204ENST00000366290 LAX1Q8IWV1 398 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 SLC24A4Q8NFF2 622 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 DMBX1Q8NFW5 382 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 OR11H6Q8NGC7 330 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 OR4K15Q8NH41 348 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 SGMS2Q8NHU3 365 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 MRGPRDQ8TDS7 321 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 CCDC107Q8WV48 283 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 SGK494Q96LW2 274 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 ZNF714Q96N38 554 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 Q9N2K0 584 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 TAS2R3Q9NYW6 316 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 VPREB3Q9UKI3 123 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 RNF150Q9ULK6 438 aa6.18□□□□□ -1.42
YBX3-204ENST00000366290 NOTCH1P46531 2555 aa6.17□□□□□ -1.42
YBX3-204ENST00000366290 TRAV18A0A075B6X5 111 aa6.17□□□□□ -1.42
YBX3-204ENST00000366290 TRGV10A0A0A0MS01 117 aa6.17□□□□□ -1.42
YBX3-204ENST00000366290 KBTBD11-OT1A0A1B0GTJ5 212 aa6.17□□□□□ -1.42
YBX3-204ENST00000366290 FUOMA2VDF0 154 aa6.17□□□□□ -1.42
YBX3-204ENST00000366290 TMEM235A6NFC5 223 aa6.17□□□□□ -1.42
YBX3-204ENST00000366290 ZNF729A6NN14 1252 aaPredicted RBP6.17□□□□□ -1.42
YBX3-204ENST00000366290 SERPINE3A8MV23 424 aa6.17□□□□□ -1.42
YBX3-204ENST00000366290 KRTAP29-1A8MX34 341 aaPredicted RBP6.17□□□□□ -1.42
YBX3-204ENST00000366290 C12orf77C9JDV5 145 aa6.17□□□□□ -1.42
YBX3-204ENST00000366290 CLPXO76031 633 aa6.17□□□□□ -1.42
YBX3-204ENST00000366290 HLA-DQB1P01920 261 aa6.17□□□□□ -1.42
YBX3-204ENST00000366290 IGHV1-8P0DP01 117 aa6.17□□□□□ -1.42
YBX3-204ENST00000366290 OMGP23515 440 aa6.17□□□□□ -1.42
YBX3-204ENST00000366290 SOX6P35712 828 aa6.17□□□□□ -1.42
YBX3-204ENST00000366290 GLP1RP43220 463 aa6.17□□□□□ -1.42
YBX3-204ENST00000366290 DYNLT3P51808 116 aa6.17□□□□□ -1.42
YBX3-204ENST00000366290 CX3CL1P78423 397 aa6.17□□□□□ -1.42
YBX3-204ENST00000366290 HMGN3Q15651 99 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms