RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CXCL1P09341 107 aa18.78■□□□□ 0.6
LDB1-201ENST00000361198 HOXA5P20719 270 aa18.78■□□□□ 0.6
LDB1-201ENST00000361198 G6PCP35575 357 aa18.78■□□□□ 0.6
LDB1-201ENST00000361198 SELENOVP59797 346 aa18.78■□□□□ 0.6
LDB1-201ENST00000361198 ZNF343Q6P1L6 599 aa18.78■□□□□ 0.6
LDB1-201ENST00000361198 PLPPR2Q96GM1 343 aa18.78■□□□□ 0.6
LDB1-201ENST00000361198 RCC1LQ96I51 464 aaKnown RBP18.78■□□□□ 0.6
LDB1-201ENST00000361198 WDR61Q9GZS3 305 aaKnown RBP18.78■□□□□ 0.6
LDB1-201ENST00000361198 ZNF665Q9H7R5 613 aa18.78■□□□□ 0.6
LDB1-201ENST00000361198 GSN-AS1Q9NRJ2 163 aa18.78■□□□□ 0.6
LDB1-201ENST00000361198 TLN1Q9Y490 2541 aaKnown RBP18.78■□□□□ 0.6
LDB1-201ENST00000361198 CLDN1O95832 211 aa18.77■□□□□ 0.6
LDB1-201ENST00000361198 GZMHP20718 246 aa18.77■□□□□ 0.6
LDB1-201ENST00000361198 GATA4P43694 442 aa18.77■□□□□ 0.6
LDB1-201ENST00000361198 PNRC1Q12796 327 aaPredicted RBP18.77■□□□□ 0.6
LDB1-201ENST00000361198 KIAA0141Q14154 515 aaPredicted RBP18.77■□□□□ 0.6
LDB1-201ENST00000361198 PPP1R35Q8TAP8 253 aa18.77■□□□□ 0.6
LDB1-201ENST00000361198 LINC00473A8K010 186 aa18.77■□□□□ 0.6
LDB1-201ENST00000361198 K7ENP7 123 aa18.77■□□□□ 0.6
LDB1-201ENST00000361198 S1PR2O95136 353 aa18.77■□□□□ 0.6
LDB1-201ENST00000361198 IGHV1-46P01743 117 aa18.77■□□□□ 0.6
LDB1-201ENST00000361198 FABP1P07148 127 aa18.77■□□□□ 0.6
LDB1-201ENST00000361198 PMS2P11Q13670 270 aa18.77■□□□□ 0.6
LDB1-201ENST00000361198 MSMO1Q15800 293 aa18.77■□□□□ 0.6
LDB1-201ENST00000361198 PINX1Q96BK5 328 aaKnown RBP18.77■□□□□ 0.6
LDB1-201ENST00000361198 GCM1Q9NP62 436 aa18.77■□□□□ 0.6
LDB1-201ENST00000361198 TMEM242Q9NWH2 141 aa18.77■□□□□ 0.6
LDB1-201ENST00000361198 C16orf97H3BN30 126 aa18.76■□□□□ 0.59
LDB1-201ENST00000361198 SELLP14151 372 aa18.76■□□□□ 0.59
LDB1-201ENST00000361198 Q3ZCU0 254 aa18.76■□□□□ 0.59
LDB1-201ENST00000361198 PRR30Q53SZ7 412 aaPredicted RBP18.76■□□□□ 0.59
LDB1-201ENST00000361198 CA5BP1Q8WTZ4 195 aa18.76■□□□□ 0.59
LDB1-201ENST00000361198 SNRNP40Q96DI7 357 aaKnown RBP18.76■□□□□ 0.59
LDB1-201ENST00000361198 OR4C12Q96R67 309 aa18.76■□□□□ 0.59
LDB1-201ENST00000361198 P2RX4Q99571 388 aa18.76■□□□□ 0.59
LDB1-201ENST00000361198 P0C879 139 aa18.76■□□□□ 0.59
LDB1-201ENST00000361198 EDDM3BP56851 147 aa18.76■□□□□ 0.59
LDB1-201ENST00000361198 RAB11AP62491 216 aa18.76■□□□□ 0.59
LDB1-201ENST00000361198 TNFAIP6P98066 277 aaPredicted RBP18.76■□□□□ 0.59
LDB1-201ENST00000361198 LCN15Q6UWW0 184 aa18.76■□□□□ 0.59
LDB1-201ENST00000361198 TMEM14EPQ6UXP3 125 aa18.76■□□□□ 0.59
LDB1-201ENST00000361198 SSX7Q7RTT5 188 aa18.76■□□□□ 0.59
LDB1-201ENST00000361198 LILRB2Q8N423 598 aa18.76■□□□□ 0.59
LDB1-201ENST00000361198 IL19Q9UHD0 177 aa18.76■□□□□ 0.59
LDB1-201ENST00000361198 DOCK11Q5JSL3 2073 aa18.76■□□□□ 0.59
LDB1-201ENST00000361198 ATXN7O15265 892 aaPredicted RBP18.75■□□□□ 0.59
LDB1-201ENST00000361198 CR1LQ2VPA4 569 aa18.75■□□□□ 0.59
LDB1-201ENST00000361198 TMEM41BQ5BJD5 291 aa18.75■□□□□ 0.59
LDB1-201ENST00000361198 SPANXN5Q5MJ07 72 aa18.75■□□□□ 0.59
LDB1-201ENST00000361198 TMEM108Q6UXF1 575 aa18.75■□□□□ 0.59
LDB1-201ENST00000361198 OR51M1Q9H341 326 aa18.75■□□□□ 0.59
LDB1-201ENST00000361198 GNG12Q9UBI6 72 aa18.75■□□□□ 0.59
LDB1-201ENST00000361198 ZFP92A6NM28 416 aa18.75■□□□□ 0.59
LDB1-201ENST00000361198 MORN2Q502X0 79 aa18.75■□□□□ 0.59
LDB1-201ENST00000361198 NCMAPQ5T1S8 102 aa18.75■□□□□ 0.59
LDB1-201ENST00000361198 ELOVL5Q9NYP7 299 aa18.75■□□□□ 0.59
LDB1-201ENST00000361198 RNF7Q9UBF6 113 aa18.75■□□□□ 0.59
LDB1-201ENST00000361198 TNFRSF9Q07011 255 aa18.74■□□□□ 0.59
LDB1-201ENST00000361198 ZNF66Q6ZN08 573 aa18.74■□□□□ 0.59
LDB1-201ENST00000361198 CENPVQ7Z7K6 275 aaPredicted RBP18.74■□□□□ 0.59
LDB1-201ENST00000361198 WFDC8Q8IUA0 241 aa18.74■□□□□ 0.59
LDB1-201ENST00000361198 NUP37Q8NFH4 326 aa18.74■□□□□ 0.59
LDB1-201ENST00000361198 TAF15Q92804 592 aaKnown RBP eCLIP18.74■□□□□ 0.59
LDB1-201ENST00000361198 HSPB7Q9UBY9 170 aa18.74■□□□□ 0.59
LDB1-201ENST00000361198 ZNF835Q9Y2P0 537 aa18.74■□□□□ 0.59
LDB1-201ENST00000361198 URGCP-MRPS24S4R325 110 aa18.74■□□□□ 0.59
LDB1-201ENST00000361198 PROP1O75360 226 aa18.74■□□□□ 0.59
LDB1-201ENST00000361198 CDX1P47902 265 aaPredicted RBP18.74■□□□□ 0.59
LDB1-201ENST00000361198 RND2P52198 227 aa18.74■□□□□ 0.59
LDB1-201ENST00000361198 DUX4L9Q6RFH8 374 aaPredicted RBP18.74■□□□□ 0.59
LDB1-201ENST00000361198 OR13D1Q8NGV5 346 aa18.74■□□□□ 0.59
LDB1-201ENST00000361198 FAM222BQ8WU58 562 aa18.74■□□□□ 0.59
LDB1-201ENST00000361198 EDARADDQ8WWZ3 215 aa18.74■□□□□ 0.59
LDB1-201ENST00000361198 VAX2Q9UIW0 290 aa18.74■□□□□ 0.59
LDB1-201ENST00000361198 JPT1Q9UK76 154 aa18.74■□□□□ 0.59
LDB1-201ENST00000361198 TIMM9Q9Y5J7 89 aa18.74■□□□□ 0.59
LDB1-201ENST00000361198 DSCAML1Q8TD84 2053 aa18.73■□□□□ 0.59
LDB1-201ENST00000361198 TGIF2-C20orf24A0A0A6YYL0 155 aa18.73■□□□□ 0.59
LDB1-201ENST00000361198 LINC00587B1AMM8 73 aa18.73■□□□□ 0.59
LDB1-201ENST00000361198 CYB5R3P00387 301 aaPredicted RBP18.73■□□□□ 0.59
LDB1-201ENST00000361198 HSD17B10Q99714 261 aaKnown RBP18.73■□□□□ 0.59
LDB1-201ENST00000361198 DOK5Q9P104 306 aa18.73■□□□□ 0.59
LDB1-201ENST00000361198 DPRXA6NFQ7 191 aa18.72■□□□□ 0.59
LDB1-201ENST00000361198 IGHV3-7P01780 117 aa18.72■□□□□ 0.59
LDB1-201ENST00000361198 LOXL3P58215 753 aa18.72■□□□□ 0.59
LDB1-201ENST00000361198 SLC38A11Q08AI6 406 aa18.72■□□□□ 0.59
LDB1-201ENST00000361198 ZNF674Q2M3X9 581 aa18.72■□□□□ 0.59
LDB1-201ENST00000361198 TCTEX1D1Q8N7M0 179 aa18.72■□□□□ 0.59
LDB1-201ENST00000361198 RBKSQ9H477 322 aa18.72■□□□□ 0.59
LDB1-201ENST00000361198 SDF2L1Q9HCN8 221 aa18.72■□□□□ 0.59
LDB1-201ENST00000361198 DYSFO75923 2080 aa18.72■□□□□ 0.59
LDB1-201ENST00000361198 S100PP25815 95 aa18.72■□□□□ 0.59
LDB1-201ENST00000361198 FGF8P55075 233 aaPredicted RBP18.72■□□□□ 0.59
LDB1-201ENST00000361198 TGIF2LYQ8IUE0 185 aa18.72■□□□□ 0.59
LDB1-201ENST00000361198 JKAMPQ9P055 326 aa18.72■□□□□ 0.59
LDB1-201ENST00000361198 LRRC30A6NM36 301 aa18.71■□□□□ 0.59
LDB1-201ENST00000361198 YPEL1O60688 119 aa18.71■□□□□ 0.59
LDB1-201ENST00000361198 CLDN14O95500 239 aa18.71■□□□□ 0.59
LDB1-201ENST00000361198 THBDP07204 575 aa18.71■□□□□ 0.59
LDB1-201ENST00000361198 GPR12P47775 334 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms