RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 FAM180AQ6UWF9 173 aa21.87■■□□□ 1.09
CUEDC1-201ENST00000360238 QTRT1Q9BXR0 403 aaKnown RBP21.87■■□□□ 1.09
CUEDC1-201ENST00000360238 NPCDR1Q9BY65 106 aa21.87■■□□□ 1.09
CUEDC1-201ENST00000360238 DSCAML1Q8TD84 2053 aa21.87■■□□□ 1.09
CUEDC1-201ENST00000360238 OR9G9P0C7N8 305 aa21.87■■□□□ 1.09
CUEDC1-201ENST00000360238 MDKP21741 143 aaPredicted RBP21.87■■□□□ 1.09
CUEDC1-201ENST00000360238 ZNRF1Q8ND25 227 aa21.87■■□□□ 1.09
CUEDC1-201ENST00000360238 ITLN1Q8WWA0 313 aa21.87■■□□□ 1.09
CUEDC1-201ENST00000360238 IFI27L2Q9H2X8 130 aa21.87■■□□□ 1.09
CUEDC1-201ENST00000360238 RAB9BQ9NP90 201 aa21.87■■□□□ 1.09
CUEDC1-201ENST00000360238 ITGB1BP1O14713 200 aa21.86■■□□□ 1.09
CUEDC1-201ENST00000360238 Q8WTZ3 238 aa21.86■■□□□ 1.09
CUEDC1-201ENST00000360238 CALYQ9NYX4 217 aa21.86■■□□□ 1.09
CUEDC1-201ENST00000360238 TANC2Q9HCD6 1990 aa21.85■■□□□ 1.09
CUEDC1-201ENST00000360238 M0R1X1 148 aa21.85■■□□□ 1.09
CUEDC1-201ENST00000360238 SPRY3O43610 288 aa21.85■■□□□ 1.09
CUEDC1-201ENST00000360238 FAM222BQ8WU58 562 aa21.85■■□□□ 1.09
CUEDC1-201ENST00000360238 TMEM242Q9NWH2 141 aa21.85■■□□□ 1.09
CUEDC1-201ENST00000360238 C15orf62A8K5M9 175 aa21.85■■□□□ 1.09
CUEDC1-201ENST00000360238 CEACAM8P31997 349 aaPredicted RBP21.85■■□□□ 1.09
CUEDC1-201ENST00000360238 KIR2DS2P43631 304 aa21.85■■□□□ 1.09
CUEDC1-201ENST00000360238 EDDM3BP56851 147 aa21.85■■□□□ 1.09
CUEDC1-201ENST00000360238 TFF3Q07654 80 aa21.85■■□□□ 1.09
CUEDC1-201ENST00000360238 VHLLQ6RSH7 139 aa21.85■■□□□ 1.09
CUEDC1-201ENST00000360238 IQCF2Q8IXL9 164 aa21.85■■□□□ 1.09
CUEDC1-201ENST00000360238 RBMXL3Q8N7X1 1067 aaKnown RBP21.85■■□□□ 1.09
CUEDC1-201ENST00000360238 ATXN7O15265 892 aaPredicted RBP21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 NDUFS6O75380 124 aaKnown RBP21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 FABP9Q0Z7S8 132 aa21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 FFAR4Q5NUL3 377 aa21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 PRAMEF5Q5TYX0 476 aa21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 ZNF709Q8N972 641 aa21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 OR10G9Q8NGN4 311 aa21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 OR10G7Q8NGN6 311 aa21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 SDF2L1Q9HCN8 221 aa21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 GAB2Q9UQC2 676 aa21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 CADP27708 2225 aa21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 C17orf112F2Z3M2 114 aa21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 CGB3P0DN86 165 aa21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 CGB7P0DN87 165 aa21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 RPS10P46783 165 aaKnown RBP21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 SPCS3P61009 180 aa21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 MEF2BQ02080 365 aaPredicted RBP21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 PDLIM3Q53GG5 364 aaPredicted RBP21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 SPINK9Q5DT21 86 aa21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 OR52E5Q8NH55 327 aa21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 SLC25A22Q9H936 323 aa21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 DSCAMO60469 2012 aa21.84■■□□□ 1.09
CUEDC1-201ENST00000360238 PCP4L1A6NKN8 68 aa21.83■■□□□ 1.09
CUEDC1-201ENST00000360238 AP4M1O00189 453 aa21.83■■□□□ 1.09
CUEDC1-201ENST00000360238 CYB5R3P00387 301 aaPredicted RBP21.83■■□□□ 1.09
CUEDC1-201ENST00000360238 RAB7AP51149 207 aa21.83■■□□□ 1.09
CUEDC1-201ENST00000360238 ERVK-16P61578 105 aa21.83■■□□□ 1.09
CUEDC1-201ENST00000360238 PLPPR2Q96GM1 343 aa21.83■■□□□ 1.09
CUEDC1-201ENST00000360238 ACTR3CQ9C0K3 210 aaPredicted RBP21.83■■□□□ 1.09
CUEDC1-201ENST00000360238 ASPMQ8IZT6 3477 aa21.83■■□□□ 1.08
CUEDC1-201ENST00000360238 SMIM6P0DI80 62 aa21.82■■□□□ 1.08
CUEDC1-201ENST00000360238 SELENOVP59797 346 aa21.82■■□□□ 1.08
CUEDC1-201ENST00000360238 ERVFRD-1P60508 538 aa21.82■■□□□ 1.08
CUEDC1-201ENST00000360238 RPP30P78346 268 aaKnown RBP21.82■■□□□ 1.08
CUEDC1-201ENST00000360238 KRTCAP3Q53RY4 240 aa21.82■■□□□ 1.08
CUEDC1-201ENST00000360238 ZNF343Q6P1L6 599 aa21.82■■□□□ 1.08
CUEDC1-201ENST00000360238 CFAP47Q6ZTR5 3102 aa21.82■■□□□ 1.08
CUEDC1-201ENST00000360238 OR4A16Q8NH70 328 aa21.82■■□□□ 1.08
CUEDC1-201ENST00000360238 FAM57AQ8TBR7 257 aa21.82■■□□□ 1.08
CUEDC1-201ENST00000360238 Q8TCH9 128 aa21.82■■□□□ 1.08
CUEDC1-201ENST00000360238 ZNF134P52741 427 aa21.82■■□□□ 1.08
CUEDC1-201ENST00000360238 RPL39P5Q59GN2 51 aa21.82■■□□□ 1.08
CUEDC1-201ENST00000360238 S1PR3Q99500 378 aa21.82■■□□□ 1.08
CUEDC1-201ENST00000360238 TCEAL7Q9BRU2 100 aa21.82■■□□□ 1.08
CUEDC1-201ENST00000360238 MANBALQ9NQG1 85 aa21.82■■□□□ 1.08
CUEDC1-201ENST00000360238 RNF7Q9UBF6 113 aa21.82■■□□□ 1.08
CUEDC1-201ENST00000360238 DMXL1Q9Y485 3027 aa21.81■■□□□ 1.08
CUEDC1-201ENST00000360238 CXCL1P09341 107 aa21.81■■□□□ 1.08
CUEDC1-201ENST00000360238 CD81P60033 236 aa21.81■■□□□ 1.08
CUEDC1-201ENST00000360238 HNF4GQ14541 408 aa21.81■■□□□ 1.08
CUEDC1-201ENST00000360238 WDR25Q64LD2 544 aaPredicted RBP21.81■■□□□ 1.08
CUEDC1-201ENST00000360238 SDSLQ96GA7 329 aa21.81■■□□□ 1.08
CUEDC1-201ENST00000360238 IL19Q9UHD0 177 aa21.81■■□□□ 1.08
CUEDC1-201ENST00000360238 NQO2P16083 231 aa21.81■■□□□ 1.08
CUEDC1-201ENST00000360238 PSMB3P49720 205 aa21.81■■□□□ 1.08
CUEDC1-201ENST00000360238 C17orf58Q2M2W7 97 aa21.81■■□□□ 1.08
CUEDC1-201ENST00000360238 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.81■■□□□ 1.08
CUEDC1-201ENST00000360238 DDB2Q92466 427 aa21.81■■□□□ 1.08
CUEDC1-201ENST00000360238 DIRC2Q96SL1 478 aa21.81■■□□□ 1.08
CUEDC1-201ENST00000360238 ZNF251Q9BRH9 671 aa21.81■■□□□ 1.08
CUEDC1-201ENST00000360238 WDR83OSQ9Y284 106 aa21.81■■□□□ 1.08
CUEDC1-201ENST00000360238 RAI1Q7Z5J4 1906 aaPredicted RBP21.8■■□□□ 1.08
CUEDC1-201ENST00000360238 TMEM250H0YL14 139 aa21.8■■□□□ 1.08
CUEDC1-201ENST00000360238 SOX15O60248 233 aa21.8■■□□□ 1.08
CUEDC1-201ENST00000360238 RND2P52198 227 aa21.8■■□□□ 1.08
CUEDC1-201ENST00000360238 RPS16P62249 146 aaKnown RBP21.8■■□□□ 1.08
CUEDC1-201ENST00000360238 TCF15Q12870 199 aa21.8■■□□□ 1.08
CUEDC1-201ENST00000360238 GFOD1Q9NXC2 390 aa21.8■■□□□ 1.08
CUEDC1-201ENST00000360238 STUMQ69YW2 141 aa21.8■■□□□ 1.08
CUEDC1-201ENST00000360238 GCM1Q9NP62 436 aa21.8■■□□□ 1.08
CUEDC1-201ENST00000360238 URGCP-MRPS24S4R325 110 aa21.8■■□□□ 1.08
CUEDC1-201ENST00000360238 TNFAIP6P98066 277 aaPredicted RBP21.79■■□□□ 1.08
CUEDC1-201ENST00000360238 SSX9Q7RTT3 188 aa21.79■■□□□ 1.08
CUEDC1-201ENST00000360238 OR4S2Q8NH73 311 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms