RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 POMT1Q9Y6A1 747 aa18.84■□□□□ 0.61
SDF4-202ENST00000360001 ABCA2Q9BZC7 2435 aa18.83■□□□□ 0.61
SDF4-202ENST00000360001 RNF222A6NCQ9 220 aa18.83■□□□□ 0.61
SDF4-202ENST00000360001 ST8SIA3O43173 380 aa18.83■□□□□ 0.61
SDF4-202ENST00000360001 KCNAB3O43448 404 aa18.83■□□□□ 0.61
SDF4-202ENST00000360001 SNAPC5O75971 98 aa18.83■□□□□ 0.61
SDF4-202ENST00000360001 OR13D1Q8NGV5 346 aa18.83■□□□□ 0.61
SDF4-202ENST00000360001 R3HDM4Q96D70 268 aa18.83■□□□□ 0.61
SDF4-202ENST00000360001 UNKLQ9H9P5 680 aaKnown RBP18.83■□□□□ 0.61
SDF4-202ENST00000360001 POLR3KQ9Y2Y1 108 aaPredicted RBP18.83■□□□□ 0.61
SDF4-202ENST00000360001 MARCH11A6NNE9 402 aa18.82■□□□□ 0.6
SDF4-202ENST00000360001 IL3RAP26951 378 aa18.82■□□□□ 0.6
SDF4-202ENST00000360001 NKX2-1P43699 371 aaPredicted RBP18.82■□□□□ 0.6
SDF4-202ENST00000360001 IFITM2Q01629 132 aa18.82■□□□□ 0.6
SDF4-202ENST00000360001 ID3Q02535 119 aa18.82■□□□□ 0.6
SDF4-202ENST00000360001 HCP5Q6MZN7 132 aa18.82■□□□□ 0.6
SDF4-202ENST00000360001 OR4P4Q8NGL7 312 aa18.82■□□□□ 0.6
SDF4-202ENST00000360001 ZFP57Q9NU63 452 aa18.82■□□□□ 0.6
SDF4-202ENST00000360001 GCN1Q92616 2671 aaKnown RBP18.82■□□□□ 0.6
SDF4-202ENST00000360001 APCP25054 2843 aa18.82■□□□□ 0.6
SDF4-202ENST00000360001 BUB1B-PAK6H3BSN5 160 aa18.82■□□□□ 0.6
SDF4-202ENST00000360001 RLN2P04090 185 aa18.82■□□□□ 0.6
SDF4-202ENST00000360001 CLEC12BQ2HXU8 276 aa18.82■□□□□ 0.6
SDF4-202ENST00000360001 OR11H6Q8NGC7 330 aa18.82■□□□□ 0.6
SDF4-202ENST00000360001 RBMXL1Q96E39 390 aaKnown RBP18.82■□□□□ 0.6
SDF4-202ENST00000360001 NABP2Q9BQ15 211 aa18.82■□□□□ 0.6
SDF4-202ENST00000360001 SIRPDQ9H106 197 aa18.82■□□□□ 0.6
SDF4-202ENST00000360001 RCL1Q9Y2P8 373 aaKnown RBP18.82■□□□□ 0.6
SDF4-202ENST00000360001 WNK2Q9Y3S1 2297 aa18.82■□□□□ 0.6
SDF4-202ENST00000360001 CRYZL1O95825 349 aa18.81■□□□□ 0.6
SDF4-202ENST00000360001 ACOT7LQ6ZUV0 252 aa18.81■□□□□ 0.6
SDF4-202ENST00000360001 VMO1Q7Z5L0 202 aa18.81■□□□□ 0.6
SDF4-202ENST00000360001 OR5AN1Q8NGI8 311 aa18.81■□□□□ 0.6
SDF4-202ENST00000360001 SLC35D1Q9NTN3 355 aa18.81■□□□□ 0.6
SDF4-202ENST00000360001 BEX4Q9NWD9 120 aaPredicted RBP18.81■□□□□ 0.6
SDF4-202ENST00000360001 COA4Q9NYJ1 87 aa18.81■□□□□ 0.6
SDF4-202ENST00000360001 NBPF19A0A087WUL8 3843 aa18.81■□□□□ 0.6
SDF4-202ENST00000360001 H0YJW9 148 aa18.81■□□□□ 0.6
SDF4-202ENST00000360001 AP2S1P53680 142 aaPredicted RBP18.81■□□□□ 0.6
SDF4-202ENST00000360001 KLRD1Q13241 179 aa18.81■□□□□ 0.6
SDF4-202ENST00000360001 MIDNQ504T8 468 aa18.81■□□□□ 0.6
SDF4-202ENST00000360001 TMUB2Q71RG4 321 aa18.81■□□□□ 0.6
SDF4-202ENST00000360001 TGIF2LXQ8IUE1 241 aa18.81■□□□□ 0.6
SDF4-202ENST00000360001 HEXA-AS1Q9H8Q6 139 aa18.81■□□□□ 0.6
SDF4-202ENST00000360001 NXPH3O95157 252 aa18.8■□□□□ 0.6
SDF4-202ENST00000360001 S100A11P31949 105 aa18.8■□□□□ 0.6
SDF4-202ENST00000360001 POLR2GP62487 172 aaKnown RBP eCLIP18.8■□□□□ 0.6
SDF4-202ENST00000360001 ZNF345Q14585 488 aa18.8■□□□□ 0.6
SDF4-202ENST00000360001 H2BFWTQ7Z2G1 175 aa18.8■□□□□ 0.6
SDF4-202ENST00000360001 INO80EQ8NBZ0 244 aaPredicted RBP18.8■□□□□ 0.6
SDF4-202ENST00000360001 DMBX1Q8NFW5 382 aa18.8■□□□□ 0.6
SDF4-202ENST00000360001 LPAR2Q9HBW0 351 aa18.8■□□□□ 0.6
SDF4-202ENST00000360001 MAP1AP78559 2803 aaPredicted RBP18.8■□□□□ 0.6
SDF4-202ENST00000360001 MSGN1A6NI15 193 aa18.79■□□□□ 0.6
SDF4-202ENST00000360001 OR2F2O95006 317 aa18.79■□□□□ 0.6
SDF4-202ENST00000360001 IGKV1-16P04430 117 aa18.79■□□□□ 0.6
SDF4-202ENST00000360001 MMP9P14780 707 aa18.79■□□□□ 0.6
SDF4-202ENST00000360001 NQO2P16083 231 aa18.79■□□□□ 0.6
SDF4-202ENST00000360001 OR2F1Q13607 317 aa18.79■□□□□ 0.6
SDF4-202ENST00000360001 RTL8BQ17RB0 113 aa18.79■□□□□ 0.6
SDF4-202ENST00000360001 ARL6Q9H0F7 186 aa18.79■□□□□ 0.6
SDF4-202ENST00000360001 MAGT1Q9H0U3 335 aa18.79■□□□□ 0.6
SDF4-202ENST00000360001 C11orf1Q9H5F2 150 aa18.79■□□□□ 0.6
SDF4-202ENST00000360001 AMMECR1Q9Y4X0 333 aaPredicted RBP18.79■□□□□ 0.6
SDF4-202ENST00000360001 ODF3BA8MYP8 253 aa18.79■□□□□ 0.6
SDF4-202ENST00000360001 TAGLNQ01995 201 aaKnown RBP18.79■□□□□ 0.6
SDF4-202ENST00000360001 OPCMLQ14982 345 aa18.79■□□□□ 0.6
SDF4-202ENST00000360001 DEFB113Q30KQ7 82 aa18.79■□□□□ 0.6
SDF4-202ENST00000360001 DHRS7BQ6IAN0 325 aaPredicted RBP18.79■□□□□ 0.6
SDF4-202ENST00000360001 VKORC1L1Q8N0U8 176 aa18.79■□□□□ 0.6
SDF4-202ENST00000360001 KCNRGQ8N5I3 272 aa18.79■□□□□ 0.6
SDF4-202ENST00000360001 NAV2Q8IVL1 2488 aa18.78■□□□□ 0.6
SDF4-202ENST00000360001 A0A0D9SG52 128 aa18.78■□□□□ 0.6
SDF4-202ENST00000360001 E5RGE8 158 aa18.78■□□□□ 0.6
SDF4-202ENST00000360001 LY6LH3BQJ8 138 aa18.78■□□□□ 0.6
SDF4-202ENST00000360001 TSC22D2O75157 780 aa18.78■□□□□ 0.6
SDF4-202ENST00000360001 APOA2P02652 100 aa18.78■□□□□ 0.6
SDF4-202ENST00000360001 SLC25A16P16260 332 aa18.78■□□□□ 0.6
SDF4-202ENST00000360001 DVL1P1P54792 670 aaPredicted RBP18.78■□□□□ 0.6
SDF4-202ENST00000360001 LDLRAD2Q5SZI1 272 aa18.78■□□□□ 0.6
SDF4-202ENST00000360001 SSX9Q7RTT3 188 aa18.78■□□□□ 0.6
SDF4-202ENST00000360001 PCGF1Q9BSM1 259 aa18.78■□□□□ 0.6
SDF4-202ENST00000360001 GON7Q9BXV9 100 aa18.78■□□□□ 0.6
SDF4-202ENST00000360001 NSG2Q9Y328 171 aa18.78■□□□□ 0.6
SDF4-202ENST00000360001 ARG1P05089 322 aa18.77■□□□□ 0.6
SDF4-202ENST00000360001 RRASP10301 218 aa18.77■□□□□ 0.6
SDF4-202ENST00000360001 HOXB4P17483 251 aaPredicted RBP18.77■□□□□ 0.6
SDF4-202ENST00000360001 ERVK-16P61578 105 aa18.77■□□□□ 0.6
SDF4-202ENST00000360001 AQP10Q96PS8 301 aa18.77■□□□□ 0.6
SDF4-202ENST00000360001 RNASEK-C17orf49H0YIS7 233 aa18.77■□□□□ 0.59
SDF4-202ENST00000360001 OR9G9P0C7N8 305 aa18.77■□□□□ 0.59
SDF4-202ENST00000360001 C4BPBP20851 252 aa18.77■□□□□ 0.59
SDF4-202ENST00000360001 SSSCA1O60232 199 aa18.76■□□□□ 0.59
SDF4-202ENST00000360001 TOX4O94842 621 aa18.76■□□□□ 0.59
SDF4-202ENST00000360001 POU2AF1Q16633 256 aa18.76■□□□□ 0.59
SDF4-202ENST00000360001 LRRC75A-AS1Q8N1F1 130 aa18.76■□□□□ 0.59
SDF4-202ENST00000360001 RHOVQ96L33 236 aa18.76■□□□□ 0.59
SDF4-202ENST00000360001 TBX15Q96SF7 602 aa18.76■□□□□ 0.59
SDF4-202ENST00000360001 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.76■□□□□ 0.59
SDF4-202ENST00000360001 TMEM140Q9NV12 185 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms