RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 IGHV2-70DA0A0C4DH43 119 aa11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 RAMP3O60896 148 aa11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 FCGR3BO75015 233 aa11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 IGKV1-39P01597 117 aa11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 IGKV1D-39P04432 117 aa11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 ZNF137PP52743 207 aa11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 S100A10P60903 97 aa11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 LCN2P80188 198 aa11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 RAB32Q13637 225 aa11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 HLA-DRB5Q30154 266 aa11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 C1orf122Q6ZSJ8 110 aa11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 FAM219AQ8IW50 185 aa11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 DRAXINQ8NBI3 349 aaPredicted RBP11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 OR4S2Q8NH73 311 aa11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 DDB2Q92466 427 aa11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 ZNRD1Q9P1U0 126 aa11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 MBD2Q9UBB5 411 aa11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 HSPB11Q9Y547 144 aa11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 KPTNQ9Y664 436 aa11.28□□□□□ -0.6
PDLIM5-203ENST00000359265 A0A1B0GU03 582 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 ARPC5O15511 151 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 S1PR2O95136 353 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 LY6G6DO95868 133 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 SCGB1D2O95969 90 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 HPRT1P00492 218 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 APOA2P02652 100 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 C4BPBP20851 252 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 EPHA1P21709 976 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 COX7A1P24310 79 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 ZFP36P26651 326 aaKnown RBP11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 ARF6P62330 175 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 TAGLNQ01995 201 aaKnown RBP11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 RTL8BQ17RB0 113 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 Q5PR19 223 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 PRSS54Q6PEW0 395 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 TMEM65Q6PI78 240 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 Q8N7P7 452 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 ZNF383Q8NA42 475 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 BEND2Q8NDZ0 799 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 WFDC11Q8NEX6 87 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 OR4D5Q8NGN0 318 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 GPR146Q96CH1 333 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 HEXA-AS1Q9H8Q6 139 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 PLEKHA2Q9HB19 425 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 MMP24Q9Y5R2 645 aa11.27□□□□□ -0.61
PDLIM5-203ENST00000359265 IGHV4-61A0A0C4DH41 118 aa11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 L7N2F9 121 aa11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 ST8SIA3O43173 380 aa11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 IGKV1-5P01602 117 aa11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 RLN2P04090 185 aa11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 RRASP10301 218 aa11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 USF1P22415 310 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 PRTN3P24158 256 aa11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 BRWD1-AS2P59051 145 aa11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 ERVK-16P61578 105 aa11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 LAMTOR1Q6IAA8 161 aa11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 DHRS7BQ6IAN0 325 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 C1orf229Q6ZS94 237 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 ZNF546Q86UE3 836 aa11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 PNKDQ8N490 385 aa11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 OR1S1Q8NH92 325 aa11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 DCUN1D4Q92564 292 aa11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 R3HDM4Q96D70 268 aa11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 MRPL20Q9BYC9 149 aaKnown RBP11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 SLC35D1Q9NTN3 355 aa11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 POLR3KQ9Y2Y1 108 aaPredicted RBP11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 LSM5Q9Y4Y9 91 aaKnown RBP11.26□□□□□ -0.61
PDLIM5-203ENST00000359265 A0A0G2JRQ6 117 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 K7EPK0 472 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 TXNL1O43396 289 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 IGLV1-47P01700 117 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 MBPP02686 304 aaPredicted RBP11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 CT45A6P0DMU7 189 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 CT45A5P0DMU8 189 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 CT45A7P0DMV0 189 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 LYL1P12980 280 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 G6PCP35575 357 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 NUP62P37198 522 aaPredicted RBP11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 NKX2-1P43699 371 aaPredicted RBP11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 LINC00205P59089 165 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 PAX2Q02962 417 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 DMRTA1Q5VZB9 504 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 H2BFWTQ7Z2G1 175 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 TGIF2LXQ8IUE1 241 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 FOXRED2Q8IWF2 684 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 FAM71E2Q8N5Q1 922 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 ST6GALNAC6Q969X2 333 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 PCGF1Q9BSM1 259 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 MFFQ9GZY8 342 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 UNKLQ9H9P5 680 aaKnown RBP11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 SIRT7Q9NRC8 400 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 PLSCR3Q9NRY6 295 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 CACNG5Q9UF02 275 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 TNFSF18Q9UNG2 199 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 POMT1Q9Y6A1 747 aa11.25□□□□□ -0.61
PDLIM5-203ENST00000359265 MARCH11A6NNE9 402 aa11.24□□□□□ -0.61
PDLIM5-203ENST00000359265 FAM157AC9JC47 383 aa11.24□□□□□ -0.61
PDLIM5-203ENST00000359265 H0YIZ8 118 aa11.24□□□□□ -0.61
PDLIM5-203ENST00000359265 WRBO00258 174 aa11.24□□□□□ -0.61
PDLIM5-203ENST00000359265 DEDDO75618 318 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms