RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 FAM90A26D6RGX4 464 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 AP4M1O00189 453 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 HRASP01112 189 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 REG1BP48304 166 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 BSXQ3C1V8 233 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 ABHD12Q8N2K0 398 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 WDR31Q8NA23 367 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 Q8NFD4 153 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 MEGF10Q96KG7 1140 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 QTRT1Q9BXR0 403 aaKnown RBP9.38□□□□□ -0.91
SSU72-202ENST00000359060 SLC35D1Q9NTN3 355 aa9.38□□□□□ -0.91
SSU72-202ENST00000359060 C16orf97H3BN30 126 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 RAB29O14966 203 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 OR7C2O60412 319 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 HPRT1P00492 218 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 CD1BP29016 333 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 KCNIP4Q6PIL6 250 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 DPPA3Q6W0C5 159 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 ZCCHC24Q8N2G6 241 aaKnown RBP9.37□□□□□ -0.91
SSU72-202ENST00000359060 RAB24Q969Q5 203 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 SERTAD4Q9NUC0 356 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 TRBV6-6A0A0A6YYG2 114 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 IFNL4K9M1U5 179 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 IGHG3P01860 377 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 ZNF585BQ52M93 769 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 SLC35E3Q7Z769 313 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 COQ2Q96H96 371 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 ACY3Q96HD9 319 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 ARHGAP21Q5T5U3 1957 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 TRAV38-1A0A0B4J264 116 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 hADV38S2A0JD32 116 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 C11orf94C9JXX5 98 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 YIF1AO95070 293 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 GLRXP35754 106 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 MEF2BQ02080 365 aaPredicted RBP9.37□□□□□ -0.91
SSU72-202ENST00000359060 ARL16Q0P5N6 197 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 LRRC75BQ2VPJ9 315 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 TIMM23BQ5SRD1 257 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 LURAP1Q96LR2 239 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 SAP30LQ9HAJ7 183 aa9.37□□□□□ -0.91
SSU72-202ENST00000359060 TLN1Q9Y490 2541 aaKnown RBP9.36□□□□□ -0.91
SSU72-202ENST00000359060 COLCA2A8K830 154 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 DEFA4P12838 97 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 TFF3Q07654 80 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 ICAM4Q14773 271 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 ZNF506Q5JVG8 444 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 RPRMLQ8N4K4 120 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 NEIL1Q96FI4 390 aaPredicted RBP9.36□□□□□ -0.91
SSU72-202ENST00000359060 UHRF2Q96PU4 802 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 TUBG2Q9NRH3 451 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 KCNIP2Q9NS61 270 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 NCKAP5O14513 1909 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 CACNA1BQ00975 2339 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 TGIF2-C20orf24A0A0A6YYL0 155 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 RPL19P84098 196 aaKnown RBP9.36□□□□□ -0.91
SSU72-202ENST00000359060 PNRC1Q12796 327 aaPredicted RBP9.36□□□□□ -0.91
SSU72-202ENST00000359060 RNF212Q495C1 297 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 CLDND2Q8NHS1 167 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 TMEM37Q8WXS4 190 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 LOC102723971A0A1B0GUV8 181 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 ZNF705GA8MUZ8 300 aaPredicted RBP9.36□□□□□ -0.91
SSU72-202ENST00000359060 IGKV1-39P01597 117 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 IGKV1D-39P04432 117 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 EGR1P18146 543 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 ABHD5Q8WTS1 349 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 PLSCR4Q9NRQ2 329 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 TMEM140Q9NV12 185 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 DOPEY2Q9Y3R5 2298 aa9.36□□□□□ -0.91
SSU72-202ENST00000359060 NDUFB3O43676 98 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 IGKV3-15P01624 115 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 PAX9P55771 341 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 RPL31P62899 125 aaKnown RBP9.35□□□□□ -0.91
SSU72-202ENST00000359060 FAM216BQ8N7L0 139 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 TOLLIPQ9H0E2 274 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 GAR1Q9NY12 217 aaKnown RBP9.35□□□□□ -0.91
SSU72-202ENST00000359060 NAT8Q9UHE5 227 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 FRYLO94915 3013 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 TRGC2P03986 189 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 NPY1RP25929 384 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 STUMQ69YW2 141 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 Q6ZR03 302 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 CD177Q8N6Q3 437 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 OR10D4PQ8NGN7 298 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 SSX3Q99909 188 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 PSMG3Q9BT73 122 aaPredicted RBP9.35□□□□□ -0.91
SSU72-202ENST00000359060 CELSR3Q9NYQ7 3312 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 MUC3AQ02505 3323 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 A8MXE2 369 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 S100A12P80511 92 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 C1orf174Q8IYL3 243 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 ZNF251Q9BRH9 671 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 ASCL3Q9NQ33 180 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 JPT1Q9UK76 154 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 RPH3ALQ9UNE2 315 aa9.35□□□□□ -0.91
SSU72-202ENST00000359060 GALR1P47211 349 aa9.34□□□□□ -0.91
SSU72-202ENST00000359060 SPCS3P61009 180 aa9.34□□□□□ -0.91
SSU72-202ENST00000359060 MIC13Q5XKP0 118 aa9.34□□□□□ -0.91
SSU72-202ENST00000359060 MBNL3Q9NUK0 354 aaKnown RBP9.34□□□□□ -0.91
SSU72-202ENST00000359060 ERVK11-1P61568 191 aa9.34□□□□□ -0.91
SSU72-202ENST00000359060 B2MP61769 119 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms