RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 IGHV3-7P01780 117 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 GABRA2P47869 451 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 GLIPR1P48060 266 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 LTC4SQ16873 150 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 EIF5AL1Q6IS14 154 aaKnown RBP10.57□□□□□ -0.72
GGPS1-202ENST00000358966 ZNF497Q6ZNH5 498 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 LHFPL4Q7Z7J7 247 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 SGPP2Q8IWX5 399 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 Q8IYB0 196 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 ZNRF1Q8ND25 227 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 DCUN1D4Q92564 292 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 COQ2Q96H96 371 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 VKORC1Q9BQB6 163 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 VPS25Q9BRG1 176 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 PLEKHA2Q9HB19 425 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 POMT1Q9Y6A1 747 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 RAI1Q7Z5J4 1906 aaPredicted RBP10.57□□□□□ -0.72
GGPS1-202ENST00000358966 IGLV3-9A0A075B6K5 115 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 H0YIZ8 118 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 PHF1O43189 567 aaPredicted RBP10.57□□□□□ -0.72
GGPS1-202ENST00000358966 SSTR5P35346 364 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 HLA-DRB3P79483 266 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 SRSF4Q08170 494 aaKnown RBP10.57□□□□□ -0.72
GGPS1-202ENST00000358966 ELOBQ15370 118 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 LYZL2Q7Z4W2 148 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 FGFRL1Q8N441 504 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 RFESDQ8TAC1 157 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 SCGB3A2Q96PL1 93 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 PUS1Q9Y606 427 aaKnown RBP eCLIP10.57□□□□□ -0.72
GGPS1-202ENST00000358966 YLPM1P49750 1951 aaKnown RBP10.57□□□□□ -0.72
GGPS1-202ENST00000358966 IGKV1D-17A0A075B6S4 117 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 PLAUP00749 431 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 IGHV1-46P01743 117 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 CDC34P49427 236 aaPredicted RBP10.57□□□□□ -0.72
GGPS1-202ENST00000358966 LINC00596Q86U02 117 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 OR1L1Q8NH94 360 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 RBMXL1Q96E39 390 aaKnown RBP10.57□□□□□ -0.72
GGPS1-202ENST00000358966 CSTL1Q9H114 145 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 TAF9BQ9HBM6 251 aa10.57□□□□□ -0.72
GGPS1-202ENST00000358966 ERRFI1Q9UJM3 462 aaPredicted RBP10.57□□□□□ -0.72
GGPS1-202ENST00000358966 IGHV3-43A0A0B4J1X8 118 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 SCAF4O95104 1147 aaKnown RBP10.56□□□□□ -0.72
GGPS1-202ENST00000358966 PPBPP02775 128 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 IGHV3-43DP0DP04 118 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 PSG2P11465 335 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 ERVFRD-1P60508 538 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 SELENOTP62341 195 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 GNMTQ14749 295 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 ADIPOQQ15848 244 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 S100A7AQ86SG5 101 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 SLC5A7Q9GZV3 580 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 EIF5A2Q9GZV4 153 aaKnown RBP10.56□□□□□ -0.72
GGPS1-202ENST00000358966 NAA60Q9H7X0 242 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 OR5AC2Q9NZP5 309 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 MED13LQ71F56 2210 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 USP9XQ93008 2570 aaPredicted RBP10.56□□□□□ -0.72
GGPS1-202ENST00000358966 KIR2DS1A0A191URI9 304 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 GCGP01275 180 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 CA7P43166 264 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 KIR2DS4P43632 304 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 S100A10P60903 97 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 RAB32Q13637 225 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 KIR2DS1Q14954 304 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 HAGHQ16775 308 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 Q6ZRG5 221 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 WFDC12Q8WWY7 111 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 ELOVL5Q9NYP7 299 aa10.56□□□□□ -0.72
GGPS1-202ENST00000358966 CENPEQ02224 2701 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 DEFB108AA8MXU0 73 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 NXPH3O95157 252 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 SCGB1D2O95969 90 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 OR13C7P0DN81 318 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 ADORA2A-AS1P86434 159 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 ATP6V1FQ16864 119 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 SMIM21Q3B7S5 101 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 OR8G2PQ6IF36 304 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 TBC1D26Q86UD7 250 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 LYG1Q8N1E2 194 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 OR51H1Q8NH63 302 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 ALKBH7Q9BT30 221 aaPredicted RBP10.55□□□□□ -0.72
GGPS1-202ENST00000358966 GCM1Q9NP62 436 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 TUBD1Q9UJT1 453 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 RNF150Q9ULK6 438 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 MSGN1A6NI15 193 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 NDUFS8O00217 210 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 OMGP23515 440 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 TNFAIP6P98066 277 aaPredicted RBP10.55□□□□□ -0.72
GGPS1-202ENST00000358966 TMEM187Q14656 261 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 UTF1Q5T230 341 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 ZNF880Q6PDB4 577 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 OR5T1Q8NG75 326 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 OR13A1Q8NGR1 328 aa10.55□□□□□ -0.72
GGPS1-202ENST00000358966 SRRM5B3KS81 715 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 C12orf77C9JDV5 145 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 HLA-GP17693 338 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 PRDX2P32119 198 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 RAB7AP51149 207 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 LINC00205P59089 165 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 GUK1Q16774 197 aa10.54□□□□□ -0.72
GGPS1-202ENST00000358966 IAH1Q2TAA2 248 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms