RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 IGHV1-69-2A0A0G2JMI3 117 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 LIPFP07098 398 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 SAA1P0DJI8 122 aaPredicted RBP8.78□□□□□ -1
CLIP1-202ENST00000358808 GALP22466 123 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 DEFB121Q5J5C9 76 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 PQLC2Q6ZP29 291 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 LINC01560Q8TB33 94 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 CLEC7AQ9BXN2 247 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 WDR54Q9H977 334 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 IGHV3-49A0A0A0MS15 119 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 CDS2O95674 445 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 OR2H2O95918 312 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 PEX11BO96011 259 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 GHRHP01286 108 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 CRHP06850 196 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 MDKP21741 143 aaPredicted RBP8.78□□□□□ -1
CLIP1-202ENST00000358808 ASIPP42127 132 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 LCN2P80188 198 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 ZNF506Q5JVG8 444 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 OR10S1Q8NGN2 331 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 SH3BGRL3Q9H299 93 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 TMEM106BQ9NUM4 274 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 PKIAP61925 76 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 ZNF826PQ6ZT77 177 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 CHST5Q9GZS9 411 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 PEMTQ9UBM1 199 aa8.78□□□□□ -1
CLIP1-202ENST00000358808 NSUN5P1Q3KNT7 163 aa8.77□□□□□ -1
CLIP1-202ENST00000358808 STHQ8IWL8 128 aa8.77□□□□□ -1
CLIP1-202ENST00000358808 RNASEH2CQ8TDP1 164 aaKnown RBP8.77□□□□□ -1
CLIP1-202ENST00000358808 APC2O95996 2303 aa8.77□□□□□ -1
CLIP1-202ENST00000358808 C7orf77A4D0Y5 90 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 M0R381 172 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 ZNF415Q09FC8 603 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 CEACAM21Q3KPI0 293 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 RNF133Q8WVZ7 376 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 NRIP2Q9BQI9 281 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 KCNE5Q9UJ90 142 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 SP9P0CG40 484 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 ZNF250P15622 560 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 ATP6V0CP27449 155 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 VN1R4Q7Z5H5 301 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 ST6GAL2Q96JF0 529 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 WDFY2Q96P53 400 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 ZNF385AQ96PM9 386 aaKnown RBP8.77□□□□□ -1.01
CLIP1-202ENST00000358808 JMJD8Q96S16 334 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 ABHD1Q96SE0 405 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 TMEM74BQ9NUR3 256 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 MRPL16Q9NX20 251 aaKnown RBP8.77□□□□□ -1.01
CLIP1-202ENST00000358808 SEMA5BQ9P283 1151 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 HMSDA8MTL9 139 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 OR10AG1Q8NH19 301 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 TMEM45BQ96B21 275 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 PARLQ9H300 379 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 OR51M1Q9H341 326 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 TCRBV16S1A1N1A0A5B0 115 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 UPK3AO75631 287 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 CFDP00746 253 aaPredicted RBP8.77□□□□□ -1.01
CLIP1-202ENST00000358808 FAM3BP58499 235 aaPredicted RBP8.77□□□□□ -1.01
CLIP1-202ENST00000358808 PLPPR5Q32ZL2 321 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 IGSF11Q5DX21 431 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 MIC13Q5XKP0 118 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 C12orf54Q6X4T0 127 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 DNM1P46Q6ZS02 220 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 LEAP2Q969E1 77 aa8.77□□□□□ -1.01
CLIP1-202ENST00000358808 C1QTNF9BB2RNN3 333 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 PSCAO43653 123 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 RNASE4P34096 147 aaKnown RBP8.76□□□□□ -1.01
CLIP1-202ENST00000358808 PEAR1Q5VY43 1037 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-202ENST00000358808 MARVELD1Q9BSK0 173 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 ST6GALNAC2Q9UJ37 374 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 TMEM250H0YL14 139 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 CBLN2Q8IUK8 224 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 FAM169BQ8N8A8 192 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 OR5AN1Q8NGI8 311 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 QTRT1Q9BXR0 403 aaKnown RBP8.76□□□□□ -1.01
CLIP1-202ENST00000358808 CDC42EP2O14613 210 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 MOSPD3O75425 235 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 TGFAP01135 160 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 HOXA5P20719 270 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 TDGF1P3P51864 188 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 TMEM42Q69YG0 159 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 COL11A1P12107 1806 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-202ENST00000358808 FOCADQ5VW36 1801 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 RRHO14718 337 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 MT-ND6P03923 174 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 VDAC2P45880 294 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-202ENST00000358808 GTSCR1Q86UQ5 136 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 C10orf111Q8N326 155 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 DNAJC4Q9NNZ3 241 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 CASP8AP2Q9UKL3 1982 aa8.76□□□□□ -1.01
CLIP1-202ENST00000358808 GOLT1AQ6ZVE7 132 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 OR9G1Q8NH87 305 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 FAM186AA6NE01 2351 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 TRAV8-6A0A0B4J262 113 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 LNP1A1A4G5 178 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 BGLAPP02818 100 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 BCL2P10415 239 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 LTBRP36941 435 aa8.75□□□□□ -1.01
CLIP1-202ENST00000358808 RPS11P62280 158 aaKnown RBP eCLIP8.75□□□□□ -1.01
CLIP1-202ENST00000358808 TTC3P53804 2025 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms