RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 HSPB9Q9BQS6 159 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 PSMG3Q9BT73 122 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-203ENST00000358528 VAMP8Q9BV40 100 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 NAT8BQ9UHF3 227 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 NAGKQ9UJ70 344 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 CPAMD8Q8IZJ3 1885 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 TRBV24-1A0A075B6N3 115 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 ZNF503-AS2A6NEH8 195 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 HAPLN4Q86UW8 402 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 ABHD12Q8N2K0 398 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 LEAP2Q969E1 77 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 FGF23Q9GZV9 251 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-203ENST00000358528 SPTBN5Q9NRC6 3674 aaKnown RBP5.55□□□□□ -1.52
CSDE1-203ENST00000358528 LRP4O75096 1905 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 A6NNC1 897 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 CER1O95813 267 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 IGHEP01854 428 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 IL3RAP26951 378 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 CD1BP29016 333 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 MEOX1P50221 254 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 TPPP2P59282 170 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 ZNF124Q15973 351 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 PRR27Q6MZM9 219 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 ASCL4Q6XD76 172 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 MOB1BQ7L9L4 216 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 OR4P4Q8NGL7 312 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 LSM10Q969L4 123 aaKnown RBP5.55□□□□□ -1.52
CSDE1-203ENST00000358528 NOL4LQ96MY1 436 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-203ENST00000358528 NDUFAF3Q9BU61 184 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 NPCDR1Q9BY65 106 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 SPTA1P02549 2419 aa5.55□□□□□ -1.52
CSDE1-203ENST00000358528 SNURFLB1AK76 121 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 H0Y8G0 127 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 GCGP01275 180 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 ARL14EPLP0DKL9 152 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 CEACAM1P13688 526 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 B3GALT5-AS1P59052 145 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 RPL30P62888 115 aaKnown RBP5.54□□□□□ -1.52
CSDE1-203ENST00000358528 RPP30P78346 268 aaKnown RBP5.54□□□□□ -1.52
CSDE1-203ENST00000358528 HES3Q5TGS1 186 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 MRPL54Q6P161 138 aaKnown RBP5.54□□□□□ -1.52
CSDE1-203ENST00000358528 FOXL2NBQ6ZUU3 175 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 TMEM251Q8N6I4 163 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 MBD3L1Q8WWY6 194 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 TRIB1Q96RU8 372 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 LRFN3Q9BTN0 628 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 TTTY12Q9BZ98 90 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 IGHV3OR15-7A0A075B7D8 119 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 LRRC30A6NM36 301 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 C12orf77C9JDV5 145 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 MT-CO2P00403 227 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 CCKARP32238 428 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 AMTP48728 403 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 FXYD3Q14802 87 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 ODF3L1Q8IXM7 274 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 TAAR6Q96RI8 345 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 QTRT1Q9BXR0 403 aaKnown RBP5.54□□□□□ -1.52
CSDE1-203ENST00000358528 OR6C3Q9NZP0 311 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 SEMA5BQ9P283 1151 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 MED13Q9UHV7 2174 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 SCO2A0A1W2PP80 73 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 CD46P15529 392 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 GNG10P50151 68 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 Q0VFX4 171 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 OR5I1Q13606 314 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 ATP6V1FQ16864 119 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 ZNF585BQ52M93 769 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 OR2Z1Q8NG97 314 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 OR1L6Q8NGR2 347 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 S1PR3Q99500 378 aa5.54□□□□□ -1.52
CSDE1-203ENST00000358528 LOC102723996A0A087X1L8 192 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 TMEM250H0YL14 139 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 KLRC4-KLRK1H3BQV0 150 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 SSPNQ14714 243 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 PRR31Q5SQ13 230 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 ABLIM2Q6H8Q1 611 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 ATOH7Q8N100 152 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 CISD2Q8N5K1 135 aaKnown RBP5.53□□□□□ -1.52
CSDE1-203ENST00000358528 ACY3Q96HD9 319 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 POM121L2Q96KW2 1035 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 HSD17B10Q99714 261 aaKnown RBP5.53□□□□□ -1.52
CSDE1-203ENST00000358528 PXMP4Q9Y6I8 212 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 MARCH11A6NNE9 402 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 PFN1P07737 140 aaKnown RBP5.53□□□□□ -1.52
CSDE1-203ENST00000358528 OR10J1P30954 320 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 RND2P52198 227 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 Q8IYB0 196 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 SAXO1Q8IYX7 474 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 OR8I2Q8N0Y5 310 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 LRRC29Q8WV35 223 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 TMEM170AQ8WVE7 144 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 WDYHV1Q96HA8 205 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 FRYLO94915 3013 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 TRAV1-1A0A0B4J248 108 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 PSPNO60542 156 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 OR10J4P0C629 311 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 ATP1A1-AS1Q5TC04 95 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 TEX38Q6PEX7 206 aa5.53□□□□□ -1.52
CSDE1-203ENST00000358528 TIPARPQ7Z3E1 657 aaKnown RBP5.53□□□□□ -1.52
CSDE1-203ENST00000358528 ZNF645Q8N7E2 425 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms