RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 CLDN14O95500 239 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 ARG1P05089 322 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 METTL15P1P0C7V9 234 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 P0C879 139 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 SMIM6P0DI80 62 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 IAPPP10997 89 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 EGR1P18146 543 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 PAX5Q02548 391 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 ATP6V1FQ16864 119 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 TMEM41BQ5BJD5 291 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 FAM53AQ6NSI3 398 aaPredicted RBP11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 TRAT1Q6PIZ9 186 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 HEPN1Q6WQI6 88 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 HAPLN4Q86UW8 402 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 LRP11Q86VZ4 500 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 OR13A1Q8NGR1 328 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 FAM216AQ8WUB2 273 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 P2RX4Q99571 388 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 RPRMQ9NS64 109 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 LAMP3Q9UQV4 416 aa11.9□□□□□ -0.51
NIPAL3-203ENST00000358028 CHD3Q12873 2000 aaKnown RBP11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 hCG_1809904A0A1W2PP81 198 aa11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 A0A1W2PR64 198 aa11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 A0A1W2PRV1 198 aa11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 BCL2P10415 239 aa11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 BMP5P22003 454 aa11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 GRNP28799 593 aaKnown RBP11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 PRDX2P32119 198 aa11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 TAGLN2P37802 199 aaKnown RBP11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 TNFRSF9Q07011 255 aa11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 PNRC1Q12796 327 aaPredicted RBP11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 ZNF787Q6DD87 383 aa11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 ALKBH2Q6NS38 261 aa11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 TMEM14EPQ6UXP3 125 aa11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 CENPVQ7Z7K6 275 aaPredicted RBP11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 TPRX1Q8N7U7 411 aa11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 CYB561D1Q8N8Q1 229 aa11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 WDR61Q9GZS3 305 aaKnown RBP11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 DUSP13Q9UII6 198 aa11.89□□□□□ -0.51
NIPAL3-203ENST00000358028 SRRM5B3KS81 715 aa11.88□□□□□ -0.51
NIPAL3-203ENST00000358028 NDUFS6O75380 124 aaKnown RBP11.88□□□□□ -0.51
NIPAL3-203ENST00000358028 EIF3GO75821 320 aaKnown RBP eCLIP11.88□□□□□ -0.51
NIPAL3-203ENST00000358028 IFNA1P01562 189 aa11.88□□□□□ -0.51
NIPAL3-203ENST00000358028 IGHV3-13P01766 116 aa11.88□□□□□ -0.51
NIPAL3-203ENST00000358028 IGHV2-5P01817 119 aa11.88□□□□□ -0.51
NIPAL3-203ENST00000358028 SSTR5P35346 364 aa11.88□□□□□ -0.51
NIPAL3-203ENST00000358028 RPL30P62888 115 aaKnown RBP11.88□□□□□ -0.51
NIPAL3-203ENST00000358028 ARL16Q0P5N6 197 aa11.88□□□□□ -0.51
NIPAL3-203ENST00000358028 ZNF66Q6ZN08 573 aa11.88□□□□□ -0.51
NIPAL3-203ENST00000358028 FAM90A1Q86YD7 464 aa11.88□□□□□ -0.51
NIPAL3-203ENST00000358028 RSG1Q9BU20 258 aa11.88□□□□□ -0.51
NIPAL3-203ENST00000358028 SFXN3Q9BWM7 321 aa11.88□□□□□ -0.51
NIPAL3-203ENST00000358028 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.88□□□□□ -0.51
NIPAL3-203ENST00000358028 CACNA1DQ01668 2161 aa11.88□□□□□ -0.51
NIPAL3-203ENST00000358028 C19orf84I3L1E1 186 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 CRYAAP02489 173 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 COL8A1P27658 744 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 GLRXP35754 106 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 DLK1P80370 383 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 TFF3Q07654 80 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 SLC38A11Q08AI6 406 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 KIAA2026Q5HYC2 2103 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 CIB3Q96Q77 187 aaPredicted RBP11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 OR4C12Q96R67 309 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 RBKSQ9H477 322 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 SEBOXQ9HB31 216 aaPredicted RBP11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 GNG13Q9P2W3 67 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 IGKV1D-17A0A075B6S4 117 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 IGHV3-43A0A0B4J1X8 118 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 LRRC30A6NM36 301 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 C15orf65H3BRN8 121 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 RAB29O14966 203 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 SPINT2O43291 252 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 RAMP3O60896 148 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 ZNF737O75373 536 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 LY86O95711 162 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 S100A9P06702 114 aaKnown RBP11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 IGHV3-43DP0DP04 118 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 CFHR2P36980 270 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 KLF3P57682 345 aaPredicted RBP11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 NKX6-1P78426 367 aaPredicted RBP11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 ZNF816Q0VGE8 651 aaPredicted RBP11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 EDDM3AQ14507 147 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 OR2B11Q5JQS5 317 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 SPANXN5Q5MJ07 72 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 ADAM5Q6NVV9 412 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 TCTEX1D2Q8WW35 142 aa11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 TAF15Q92804 592 aaKnown RBP eCLIP11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 RCC1LQ96I51 464 aaKnown RBP11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 MRPL37Q9BZE1 423 aaKnown RBP11.87□□□□□ -0.51
NIPAL3-203ENST00000358028 PKDREJQ9NTG1 2253 aa11.86□□□□□ -0.51
NIPAL3-203ENST00000358028 PCP4L1A6NKN8 68 aa11.86□□□□□ -0.51
NIPAL3-203ENST00000358028 AP4M1O00189 453 aa11.86□□□□□ -0.51
NIPAL3-203ENST00000358028 ADH4P08319 380 aa11.86□□□□□ -0.51
NIPAL3-203ENST00000358028 HTD2P86397 168 aa11.86□□□□□ -0.51
NIPAL3-203ENST00000358028 BTNL3Q6UXE8 466 aa11.86□□□□□ -0.51
NIPAL3-203ENST00000358028 MEGF10Q96KG7 1140 aa11.86□□□□□ -0.51
NIPAL3-203ENST00000358028 OR2V2Q96R30 315 aa11.86□□□□□ -0.51
NIPAL3-203ENST00000358028 HSD17B10Q99714 261 aaKnown RBP11.86□□□□□ -0.51
NIPAL3-203ENST00000358028 DCTN5Q9BTE1 182 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms