RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 CNTFRP26992 372 aa20.32■□□□□ 0.84
SSBP3-202ENST00000357475 DHODHQ02127 395 aa20.32■□□□□ 0.84
SSBP3-202ENST00000357475 PRELID3BQ9Y3B1 194 aa20.32■□□□□ 0.84
SSBP3-202ENST00000357475 RNF212BA8MTL3 300 aa20.31■□□□□ 0.84
SSBP3-202ENST00000357475 MC5RP33032 325 aa20.31■□□□□ 0.84
SSBP3-202ENST00000357475 SLC9A3R2Q15599 337 aa20.31■□□□□ 0.84
SSBP3-202ENST00000357475 AANATQ16613 207 aa20.31■□□□□ 0.84
SSBP3-202ENST00000357475 PLET1Q6UQ28 207 aa20.31■□□□□ 0.84
SSBP3-202ENST00000357475 PDPNQ86YL7 162 aa20.31■□□□□ 0.84
SSBP3-202ENST00000357475 LIN7CQ9NUP9 197 aaKnown RBP20.31■□□□□ 0.84
SSBP3-202ENST00000357475 H0Y980 276 aa20.3■□□□□ 0.84
SSBP3-202ENST00000357475 EBI3Q14213 229 aa20.3■□□□□ 0.84
SSBP3-202ENST00000357475 RTL8BQ17RB0 113 aa20.3■□□□□ 0.84
SSBP3-202ENST00000357475 TMEM128Q5BJH2 165 aa20.3■□□□□ 0.84
SSBP3-202ENST00000357475 SGPP2Q8IWX5 399 aa20.3■□□□□ 0.84
SSBP3-202ENST00000357475 Q8N6K4 173 aa20.3■□□□□ 0.84
SSBP3-202ENST00000357475 OR52B4Q8NGK2 314 aa20.3■□□□□ 0.84
SSBP3-202ENST00000357475 TCF19Q9Y242 345 aa20.3■□□□□ 0.84
SSBP3-202ENST00000357475 A6NDX4 124 aa20.29■□□□□ 0.84
SSBP3-202ENST00000357475 SRRM4A7MD48 611 aaKnown RBP20.29■□□□□ 0.84
SSBP3-202ENST00000357475 S1PR2O95136 353 aa20.29■□□□□ 0.84
SSBP3-202ENST00000357475 MOSP00540 346 aa20.29■□□□□ 0.84
SSBP3-202ENST00000357475 IGKV1-39P01597 117 aa20.29■□□□□ 0.84
SSBP3-202ENST00000357475 IGKV1D-39P04432 117 aa20.29■□□□□ 0.84
SSBP3-202ENST00000357475 OR4E1P0C645 316 aa20.29■□□□□ 0.84
SSBP3-202ENST00000357475 FAM106CPP0CH98 169 aa20.29■□□□□ 0.84
SSBP3-202ENST00000357475 VAMP1P23763 118 aa20.29■□□□□ 0.84
SSBP3-202ENST00000357475 F2RL1P55085 397 aa20.29■□□□□ 0.84
SSBP3-202ENST00000357475 THNSL2Q86YJ6 484 aa20.29■□□□□ 0.84
SSBP3-202ENST00000357475 GLYATL2Q8WU03 294 aa20.29■□□□□ 0.84
SSBP3-202ENST00000357475 MARVELD1Q9BSK0 173 aa20.29■□□□□ 0.84
SSBP3-202ENST00000357475 DNAJC9-AS1A6NH13 148 aa20.28■□□□□ 0.84
SSBP3-202ENST00000357475 TMEM11P17152 192 aa20.28■□□□□ 0.84
SSBP3-202ENST00000357475 LPAR6P43657 344 aa20.28■□□□□ 0.84
SSBP3-202ENST00000357475 MECP2P51608 486 aaKnown RBP20.28■□□□□ 0.84
SSBP3-202ENST00000357475 TAS2R31P59538 309 aa20.28■□□□□ 0.84
SSBP3-202ENST00000357475 OXA1LQ15070 435 aa20.28■□□□□ 0.84
SSBP3-202ENST00000357475 OR2T10Q8NGZ9 312 aa20.28■□□□□ 0.84
SSBP3-202ENST00000357475 LHFPL5Q8TAF8 219 aa20.28■□□□□ 0.84
SSBP3-202ENST00000357475 SSMEM1Q8WWF3 244 aa20.28■□□□□ 0.84
SSBP3-202ENST00000357475 FLYWCH2Q96CP2 140 aaKnown RBP20.28■□□□□ 0.84
SSBP3-202ENST00000357475 SEC22CQ9BRL7 303 aa20.28■□□□□ 0.84
SSBP3-202ENST00000357475 INMT-MINDY4F8WBC2 141 aa20.27■□□□□ 0.84
SSBP3-202ENST00000357475 CHST1O43916 411 aa20.27■□□□□ 0.84
SSBP3-202ENST00000357475 SCGB2A2Q13296 93 aa20.27■□□□□ 0.84
SSBP3-202ENST00000357475 TMEM177Q53S58 311 aa20.27■□□□□ 0.84
SSBP3-202ENST00000357475 VKORC1L1Q8N0U8 176 aa20.27■□□□□ 0.84
SSBP3-202ENST00000357475 OR4S2Q8NH73 311 aa20.27■□□□□ 0.84
SSBP3-202ENST00000357475 CHIAQ9BZP6 476 aa20.27■□□□□ 0.84
SSBP3-202ENST00000357475 C9orf170A2RU37 121 aa20.27■□□□□ 0.83
SSBP3-202ENST00000357475 SFT2D2O95562 160 aa20.27■□□□□ 0.83
SSBP3-202ENST00000357475 IGLV2-23P01705 113 aa20.27■□□□□ 0.83
SSBP3-202ENST00000357475 RRASP10301 218 aa20.27■□□□□ 0.83
SSBP3-202ENST00000357475 RPA2P15927 270 aa20.27■□□□□ 0.83
SSBP3-202ENST00000357475 KIR2DS2P43631 304 aa20.27■□□□□ 0.83
SSBP3-202ENST00000357475 TAGLNQ01995 201 aaKnown RBP20.27■□□□□ 0.83
SSBP3-202ENST00000357475 DHRS2Q13268 280 aa20.27■□□□□ 0.83
SSBP3-202ENST00000357475 TMEM187Q14656 261 aa20.27■□□□□ 0.83
SSBP3-202ENST00000357475 C4orf46Q504U0 113 aa20.27■□□□□ 0.83
SSBP3-202ENST00000357475 RBMS3Q6XE24 437 aaKnown RBP20.27■□□□□ 0.83
SSBP3-202ENST00000357475 CASTOR1Q8WTX7 329 aa20.27■□□□□ 0.83
SSBP3-202ENST00000357475 GALNT14Q96FL9 552 aa20.27■□□□□ 0.83
SSBP3-202ENST00000357475 PLSCR3Q9NRY6 295 aa20.27■□□□□ 0.83
SSBP3-202ENST00000357475 A0A0B4J293 547 aa20.26■□□□□ 0.83
SSBP3-202ENST00000357475 RBFOX2O43251 390 aaKnown RBP eCLIP20.26■□□□□ 0.833e-6■□□□□ 10.7
SSBP3-202ENST00000357475 HLA-AP01891 365 aaKnown RBP20.26■□□□□ 0.83
SSBP3-202ENST00000357475 UCP1P25874 307 aa20.26■□□□□ 0.83
SSBP3-202ENST00000357475 RPS16P62249 146 aaKnown RBP20.26■□□□□ 0.83
SSBP3-202ENST00000357475 SRSF2Q01130 221 aaKnown RBP20.26■□□□□ 0.83
SSBP3-202ENST00000357475 ANKRD55Q3KP44 614 aa20.26■□□□□ 0.83
SSBP3-202ENST00000357475 OR4C13Q8NGP0 309 aa20.26■□□□□ 0.83
SSBP3-202ENST00000357475 HARBI1Q96MB7 349 aa20.26■□□□□ 0.83
SSBP3-202ENST00000357475 TMEM222Q9H0R3 208 aa20.26■□□□□ 0.83
SSBP3-202ENST00000357475 SHOXO15266 292 aa20.25■□□□□ 0.83
SSBP3-202ENST00000357475 IFNA2P01563 188 aa20.25■□□□□ 0.83
SSBP3-202ENST00000357475 UBE2MP61081 183 aaKnown RBP20.25■□□□□ 0.83
SSBP3-202ENST00000357475 DHRS7BQ6IAN0 325 aaPredicted RBP20.25■□□□□ 0.83
SSBP3-202ENST00000357475 LYG2Q86SG7 212 aa20.25■□□□□ 0.83
SSBP3-202ENST00000357475 ALX4Q9H161 411 aaPredicted RBP20.25■□□□□ 0.83
SSBP3-202ENST00000357475 VPREB3Q9UKI3 123 aa20.25■□□□□ 0.83
SSBP3-202ENST00000357475 SERPINE2P07093 398 aa20.24■□□□□ 0.83
SSBP3-202ENST00000357475 TRIM16LQ309B1 348 aa20.24■□□□□ 0.83
SSBP3-202ENST00000357475 LIN54Q6MZP7 749 aa20.24■□□□□ 0.83
SSBP3-202ENST00000357475 OR5R1Q8NH85 324 aa20.24■□□□□ 0.83
SSBP3-202ENST00000357475 CD300LFQ8TDQ1 290 aa20.24■□□□□ 0.83
SSBP3-202ENST00000357475 ZNF418Q8TF45 676 aaPredicted RBP20.24■□□□□ 0.83
SSBP3-202ENST00000357475 CHPT1Q8WUD6 406 aa20.24■□□□□ 0.83
SSBP3-202ENST00000357475 RBM14Q96PK6 669 aaKnown RBP20.24■□□□□ 0.83
SSBP3-202ENST00000357475 SLC25A33Q9BSK2 321 aa20.24■□□□□ 0.83
SSBP3-202ENST00000357475 PLEKHA2Q9HB19 425 aa20.24■□□□□ 0.83
SSBP3-202ENST00000357475 TPSG1Q9NRR2 321 aa20.24■□□□□ 0.83
SSBP3-202ENST00000357475 KCNIP3Q9Y2W7 256 aa20.24■□□□□ 0.83
SSBP3-202ENST00000357475 NF1P21359 2839 aa20.23■□□□□ 0.83
SSBP3-202ENST00000357475 HPRT1P00492 218 aa20.23■□□□□ 0.83
SSBP3-202ENST00000357475 G6PCP35575 357 aa20.23■□□□□ 0.83
SSBP3-202ENST00000357475 HILS1P60008 231 aa20.23■□□□□ 0.83
SSBP3-202ENST00000357475 CBX3Q13185 183 aa20.23■□□□□ 0.83
SSBP3-202ENST00000357475 MMDQ15546 238 aa20.23■□□□□ 0.83
SSBP3-202ENST00000357475 SSX9Q7RTT3 188 aa20.23■□□□□ 0.83
SSBP3-202ENST00000357475 TCTEX1D1Q8N7M0 179 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms