RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 PGPEP1Q9NXJ5 209 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 C1RLQ9NZP8 487 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 BLACEA4D250 179 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 TNXAQ16473 311 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 CD300EQ496F6 205 aaPredicted RBP13.26□□□□□ -0.29
RTN3-205ENST00000356000 C18orf32Q8TCD1 76 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 C10orf35Q96D05 121 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 GP6Q9HCN6 339 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 SCRT2Q9NQ03 307 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 GP1BBP13224 206 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 FUT7Q11130 342 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 LY6G5CQ5SRR4 150 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 TMEM211Q6ICI0 200 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 CCDC144NLQ6NUI1 221 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 OR5A1Q8NGJ0 315 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 FAM131CQ96AQ9 280 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 TXNDC17Q9BRA2 123 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 ERRFI1Q9UJM3 462 aaPredicted RBP13.26□□□□□ -0.29
RTN3-205ENST00000356000 V9GYV3 84 aa13.26□□□□□ -0.29
RTN3-205ENST00000356000 TMEM131Q92545 1883 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 A0A087X0K7 114 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 ZNF816-ZNF321PA0A0X1KG74 233 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 TMEM189A5PLL7 270 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 C5orf63A6NC05 138 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 M0R2Z0 102 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 HLA-DQA1P01909 254 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 IL11P20809 199 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 IZUMO4Q1ZYL8 232 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 SPANXN5Q5MJ07 72 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 OR2K2Q8NGT1 345 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 RERGQ96A58 199 aaPredicted RBP13.25□□□□□ -0.29
RTN3-205ENST00000356000 AP1S3Q96PC3 154 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 JKAMPQ9P055 326 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 ZNF835Q9Y2P0 537 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 TDRD6O60522 2096 aaKnown RBP13.25□□□□□ -0.29
RTN3-205ENST00000356000 PIGBOS1A0A0B4J2F0 54 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 GAGE12HA6NDE8 117 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 NPIPB13A6NJU9 1138 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 NPIPB4C9JG80 1138 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 H3BRM9 83 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 CRXO43186 299 aaPredicted RBP13.25□□□□□ -0.29
RTN3-205ENST00000356000 ANGPTL7O43827 346 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 HSBP1O75506 76 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 GPM6AP51674 278 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 GABRA6Q16445 453 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 COLCA1Q6ZS62 124 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 TCEAL8Q8IYN2 117 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 CT55Q8WUE5 264 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 ZFYVE21Q9BQ24 234 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 TMEM70Q9BUB7 260 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 PNRC2Q9NPJ4 139 aaKnown RBP13.25□□□□□ -0.29
RTN3-205ENST00000356000 MED29Q9NX70 200 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 CRIM1Q9NZV1 1036 aa13.25□□□□□ -0.29
RTN3-205ENST00000356000 BRWD1Q9NSI6 2320 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 RALGAPA1Q6GYQ0 2036 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.24□□□□□ -0.29
RTN3-205ENST00000356000 IGKV1D-13A0A0B4J2D9 117 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 PSMB11A5LHX3 300 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 F2RL2O00254 374 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 CYC1P08574 325 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 IGKV1-13P0DP09 117 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 OTX2P32243 289 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 GPR183P32249 361 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 SRSF7Q16629 238 aaKnown RBP eCLIP13.24□□□□□ -0.29
RTN3-205ENST00000356000 LILRA6Q6PI73 481 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 ZNF841Q6ZN19 808 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 MRAP2Q96G30 205 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 FER1L6-AS2Q96M78 137 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 CACNG5Q9UF02 275 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 hDV102S1A0JD36 115 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 C17orf51A8MQB3 221 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 DHRS3O75911 302 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 CD38P28907 300 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 ZDHHC23Q8IYP9 409 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 CCL28Q9NRJ3 127 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 PLEK2Q9NYT0 353 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 MRPS17Q9Y2R5 130 aaKnown RBP13.24□□□□□ -0.29
RTN3-205ENST00000356000 SELENOKQ9Y6D0 94 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 ARL2-SNX15V9GYD0 113 aa13.24□□□□□ -0.29
RTN3-205ENST00000356000 SPAARA0A1B0GVQ0 90 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 A0A1W2PRU2 124 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 SLC25A17O43808 307 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 AGFG2O95081 481 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 DRD1P21728 446 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 SHISA2Q6UWI4 295 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 TMEM14EPQ6UXP3 125 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 OR1F12Q8NHA8 337 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 ELSPBP1Q96BH3 223 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 DGAT2Q96PD7 388 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 LY96Q9Y6Y9 160 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 TEX48A0A1B0GUV7 120 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 SCO2A0A1W2PP80 73 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 K7EQM0 130 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 PGLYRP1O75594 196 aaPredicted RBP13.23□□□□□ -0.29
RTN3-205ENST00000356000 TSPAN13O95857 204 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 AMY1AP04745 511 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 F2RP25116 425 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 TCEA2Q15560 299 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 MTURNQ8N3F0 131 aa13.23□□□□□ -0.29
RTN3-205ENST00000356000 KIR3DL3Q8N743 410 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms