RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 DIRAS3O95661 229 aa12.89□□□□□ -0.35
PDLIM7-201ENST00000355572 LGALS1P09382 135 aaKnown RBP12.89□□□□□ -0.35
PDLIM7-201ENST00000355572 APELAP0DMC3 54 aa12.89□□□□□ -0.35
PDLIM7-201ENST00000355572 ECI1P42126 302 aa12.89□□□□□ -0.35
PDLIM7-201ENST00000355572 AKIRIN2Q53H80 203 aa12.89□□□□□ -0.35
PDLIM7-201ENST00000355572 IDO2Q6ZQW0 420 aa12.89□□□□□ -0.35
PDLIM7-201ENST00000355572 TPRA1Q86W33 373 aa12.89□□□□□ -0.35
PDLIM7-201ENST00000355572 GVQW1Q8N7I0 195 aa12.89□□□□□ -0.35
PDLIM7-201ENST00000355572 OR5T1Q8NG75 326 aa12.89□□□□□ -0.35
PDLIM7-201ENST00000355572 RHOVQ96L33 236 aa12.89□□□□□ -0.35
PDLIM7-201ENST00000355572 HARBI1Q96MB7 349 aa12.89□□□□□ -0.35
PDLIM7-201ENST00000355572 GINS4Q9BRT9 223 aa12.89□□□□□ -0.35
PDLIM7-201ENST00000355572 GPR61Q9BZJ8 451 aa12.89□□□□□ -0.35
PDLIM7-201ENST00000355572 RHBDL2Q9NX52 303 aa12.89□□□□□ -0.35
PDLIM7-201ENST00000355572 SORL1Q92673 2214 aa12.88□□□□□ -0.35
PDLIM7-201ENST00000355572 A6NHS1 94 aa12.88□□□□□ -0.35
PDLIM7-201ENST00000355572 FCER2P06734 321 aa12.88□□□□□ -0.35
PDLIM7-201ENST00000355572 OR8U8P0C7N1 319 aa12.88□□□□□ -0.35
PDLIM7-201ENST00000355572 CD36P16671 472 aa12.88□□□□□ -0.35
PDLIM7-201ENST00000355572 TALDO1P37837 337 aa12.88□□□□□ -0.35
PDLIM7-201ENST00000355572 BRWD1-AS2P59051 145 aa12.88□□□□□ -0.35
PDLIM7-201ENST00000355572 TPPP2P59282 170 aa12.88□□□□□ -0.35
PDLIM7-201ENST00000355572 EIF4EBP1Q13541 118 aaPredicted RBP12.88□□□□□ -0.35
PDLIM7-201ENST00000355572 HAPLN4Q86UW8 402 aa12.88□□□□□ -0.35
PDLIM7-201ENST00000355572 OVOL1O14753 267 aa12.87□□□□□ -0.35
PDLIM7-201ENST00000355572 CRYZL1O95825 349 aa12.87□□□□□ -0.35
PDLIM7-201ENST00000355572 SMIM18P0DKX4 95 aa12.87□□□□□ -0.35
PDLIM7-201ENST00000355572 TAGLNQ01995 201 aaKnown RBP12.87□□□□□ -0.35
PDLIM7-201ENST00000355572 OR2B11Q5JQS5 317 aa12.87□□□□□ -0.35
PDLIM7-201ENST00000355572 IDNKQ5T6J7 187 aa12.87□□□□□ -0.35
PDLIM7-201ENST00000355572 TCTEX1D1Q8N7M0 179 aa12.87□□□□□ -0.35
PDLIM7-201ENST00000355572 B9D2Q9BPU9 175 aa12.87□□□□□ -0.35
PDLIM7-201ENST00000355572 ADAM30Q9UKF2 790 aa12.87□□□□□ -0.35
PDLIM7-201ENST00000355572 TRIM64CA6NLI5 447 aa12.86□□□□□ -0.35
PDLIM7-201ENST00000355572 LINC01619G3V211 115 aa12.86□□□□□ -0.35
PDLIM7-201ENST00000355572 SHOXO15266 292 aa12.86□□□□□ -0.35
PDLIM7-201ENST00000355572 HLA-DQB1P01920 261 aa12.86□□□□□ -0.35
PDLIM7-201ENST00000355572 TRGV3P03979 118 aa12.86□□□□□ -0.35
PDLIM7-201ENST00000355572 RANBP1P43487 201 aa12.86□□□□□ -0.35
PDLIM7-201ENST00000355572 C10orf55Q5SWW7 151 aa12.86□□□□□ -0.35
PDLIM7-201ENST00000355572 NDUFA13Q9P0J0 144 aa12.86□□□□□ -0.35
PDLIM7-201ENST00000355572 OR2W1Q9Y3N9 320 aa12.86□□□□□ -0.35
PDLIM7-201ENST00000355572 RBM7Q9Y580 266 aaKnown RBP12.86□□□□□ -0.35
PDLIM7-201ENST00000355572 TRAV18A0A075B6X5 111 aa12.85□□□□□ -0.35
PDLIM7-201ENST00000355572 TUSC2O75896 110 aa12.85□□□□□ -0.35
PDLIM7-201ENST00000355572 TRBV12-3P01733 135 aa12.85□□□□□ -0.35
PDLIM7-201ENST00000355572 LGALS7P47929 136 aa12.85□□□□□ -0.35
PDLIM7-201ENST00000355572 TMEM267Q0VDI3 215 aaPredicted RBP12.85□□□□□ -0.35
PDLIM7-201ENST00000355572 C19orf35Q6ZS72 473 aa12.85□□□□□ -0.35
PDLIM7-201ENST00000355572 VKORC1L1Q8N0U8 176 aa12.85□□□□□ -0.35
PDLIM7-201ENST00000355572 ZNF645Q8N7E2 425 aa12.85□□□□□ -0.35
PDLIM7-201ENST00000355572 POC5Q8NA72 575 aa12.85□□□□□ -0.35
PDLIM7-201ENST00000355572 YIPF6Q96EC8 236 aa12.85□□□□□ -0.35
PDLIM7-201ENST00000355572 ANXA10Q9UJ72 324 aa12.85□□□□□ -0.35
PDLIM7-201ENST00000355572 RBMX2Q9Y388 322 aaKnown RBP12.85□□□□□ -0.35
PDLIM7-201ENST00000355572 A0A1B0GW64 132 aa12.84□□□□□ -0.35
PDLIM7-201ENST00000355572 E7EUB6 86 aa12.84□□□□□ -0.35
PDLIM7-201ENST00000355572 RAMP3O60896 148 aa12.84□□□□□ -0.35
PDLIM7-201ENST00000355572 SAA1P0DJI8 122 aaPredicted RBP12.84□□□□□ -0.35
PDLIM7-201ENST00000355572 GNG2P59768 71 aa12.84□□□□□ -0.35
PDLIM7-201ENST00000355572 CD69Q07108 199 aa12.84□□□□□ -0.35
PDLIM7-201ENST00000355572 DYRK1AQ13627 763 aa12.84□□□□□ -0.35
PDLIM7-201ENST00000355572 PRSS8Q16651 343 aa12.84□□□□□ -0.35
PDLIM7-201ENST00000355572 VAX1Q5SQQ9 334 aa12.84□□□□□ -0.35
PDLIM7-201ENST00000355572 CNIH2Q6PI25 160 aa12.84□□□□□ -0.35
PDLIM7-201ENST00000355572 TSPAN14Q8NG11 270 aa12.84□□□□□ -0.35
PDLIM7-201ENST00000355572 SNAPC3Q92966 411 aa12.84□□□□□ -0.35
PDLIM7-201ENST00000355572 DCSTAMPQ9H295 470 aa12.84□□□□□ -0.35
PDLIM7-201ENST00000355572 ZNF256Q9Y2P7 627 aaPredicted RBP12.84□□□□□ -0.35
PDLIM7-201ENST00000355572 A0A087WXM4 84 aa12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 SMIM31A0A1B0GVY4 71 aa12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 ANKRD34BA5PLL1 514 aa12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 MEIS3P1A6NDR6 274 aa12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 FCGR3BO75015 233 aa12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 CNIH1O95406 144 aa12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 PRH1P02810 166 aa12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 SPNP16150 400 aa12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 RPL5P46777 297 aaKnown RBP12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 UBE2KP61086 200 aa12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 LSM3P62310 102 aaKnown RBP12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 ZNF45Q02386 682 aa12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 TNXAQ16473 311 aa12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 RTL8BQ17RB0 113 aa12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 PYHIN1Q6K0P9 492 aa12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 ACSM6Q6P461 480 aa12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 ASCL2Q99929 193 aa12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 AUNIPQ9H7T9 357 aa12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 ZNF430Q9H8G1 570 aaPredicted RBP12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 ZNF355PQ9NSJ1 428 aa12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 SPATA2Q9UM82 520 aa12.83□□□□□ -0.36
PDLIM7-201ENST00000355572 DPPA5A6NC42 116 aa12.82□□□□□ -0.36
PDLIM7-201ENST00000355572 MSGN1A6NI15 193 aa12.82□□□□□ -0.36
PDLIM7-201ENST00000355572 SAP30O75446 220 aa12.82□□□□□ -0.36
PDLIM7-201ENST00000355572 HSPB1P04792 205 aaKnown RBP12.82□□□□□ -0.36
PDLIM7-201ENST00000355572 MYOD1P15172 320 aa12.82□□□□□ -0.36
PDLIM7-201ENST00000355572 AADACP22760 399 aa12.82□□□□□ -0.36
PDLIM7-201ENST00000355572 RPS19P39019 145 aaKnown RBP12.82□□□□□ -0.36
PDLIM7-201ENST00000355572 ARL6IP1Q15041 203 aa12.82□□□□□ -0.36
PDLIM7-201ENST00000355572 KCTD9Q7L273 389 aa12.82□□□□□ -0.36
PDLIM7-201ENST00000355572 OVCH2Q7RTZ1 564 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms