RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 LYL1P12980 280 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 PMCHP20382 165 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 C3orf36Q3SXR2 165 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 PLAC9Q5JTB6 97 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 FAM166AQ6J272 317 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 SELENOHQ8IZQ5 122 aaKnown RBP8.51□□□□□ -1.05
SYNE1-203ENST00000354674 TNFRSF14Q92956 283 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 RSG1Q9BU20 258 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 C1orf123Q9NWV4 160 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 ELOVL5Q9NYP7 299 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 KIAA1456Q9P272 454 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 CLN8Q9UBY8 286 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 INTS1Q8N201 2190 aaKnown RBP8.51□□□□□ -1.05
SYNE1-203ENST00000354674 ZNF207O43670 478 aaKnown RBP8.51□□□□□ -1.05
SYNE1-203ENST00000354674 UBE2G2P60604 165 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 EWSR1Q01844 656 aaKnown RBP eCLIP8.51□□□□□ -1.05
SYNE1-203ENST00000354674 ZNF154Q13106 437 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 IL15RAQ13261 267 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 TIMM23BQ5SRD1 257 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 LCN12Q6JVE5 192 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 BAGE3Q86Y29 109 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 BAGE2Q86Y30 109 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 LGI3Q8N145 548 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 ORAOV1Q8WV07 137 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 RND1Q92730 232 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 MYO7BQ6PIF6 2116 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 hCG_38984A0A1B0GV85 526 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 NDUFS8O00217 210 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 SERF1AO75920 110 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 CDS2O95674 445 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 RELBQ01201 579 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 SSBP1Q04837 148 aaKnown RBP8.51□□□□□ -1.05
SYNE1-203ENST00000354674 OR8B8Q15620 311 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 OR5D14Q8NGL3 314 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 OR11L1Q8NGX0 322 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 SSC4DQ8WTU2 575 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 GATAD1Q8WUU5 269 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 TMEM170AQ8WVE7 144 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 APOBEC3DQ96AK3 386 aaPredicted RBP8.51□□□□□ -1.05
SYNE1-203ENST00000354674 FAM71F1Q96KD3 344 aaPredicted RBP8.51□□□□□ -1.05
SYNE1-203ENST00000354674 GPER1Q99527 375 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 REPIN1Q9BWE0 567 aaKnown RBP8.51□□□□□ -1.05
SYNE1-203ENST00000354674 SDF2L1Q9HCN8 221 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 OSGIN2Q9Y236 505 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 NSG2Q9Y328 171 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 A0A1W2PN81 502 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 MEGF11A6BM72 1044 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 HYPMO75409 117 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 PPBPP02775 128 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 PFN1P07737 140 aaKnown RBP8.5□□□□□ -1.05
SYNE1-203ENST00000354674 CELA3BP08861 270 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 DEFA4P12838 97 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 CCL2P13500 99 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 COMPP49747 757 aaPredicted RBP8.5□□□□□ -1.05
SYNE1-203ENST00000354674 ZNF83P51522 516 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 CHRFAM7AQ494W8 412 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 STPG3Q8N7X2 389 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 OR2T10Q8NGZ9 312 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 A0A0A6YYD4 124 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 TRGV8A0A0C4DH27 118 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 MAP1LC3B2A6NCE7 125 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 DIRC3C9JPN6 131 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 HSPB1P04792 205 aaKnown RBP8.5□□□□□ -1.05
SYNE1-203ENST00000354674 DYNLT3P51808 116 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 TAS2R30P59541 319 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 TBC1D28Q2M2D7 210 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 TMEM42Q69YG0 159 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 BATF2Q8N1L9 274 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 OR51G1Q8NGK1 321 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 OR2AE1Q8NHA4 323 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 MAP1LC3BQ9GZQ8 125 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 PKD1L2Q7Z442 2459 aa8.5□□□□□ -1.05
SYNE1-203ENST00000354674 SVILO95425 2214 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 IGHV2OR16-5A0A0B4J2B6 119 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 IGSF23A1L1A6 192 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 ST8SIA3O43173 380 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 FRMD6-AS1P0C7T7 363 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 TNFSF4P23510 183 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 RND2P52198 227 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 PIGPP57054 158 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 SCAND1P57086 179 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 BSXQ3C1V8 233 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 CXorf66Q5JRM2 361 aaPredicted RBP8.49□□□□□ -1.05
SYNE1-203ENST00000354674 C1orf100Q5SVJ3 147 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 ZNF787Q6DD87 383 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 CFAP161Q6P656 301 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 OR5AS1Q8N127 324 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 NKAIN3Q8N8D7 197 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 OR56B2PQ8NGI1 322 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 OR1N2Q8NGR9 330 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 PP6455Q8WZ26 134 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 MOB3AQ96BX8 217 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 C20orf144Q9BQM9 153 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 PARLQ9H300 379 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 B4DEV8 164 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 NGFP01138 241 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 NTF3P20783 257 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 CBLN1P23435 193 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 SMAGPQ0VAQ4 97 aa8.49□□□□□ -1.05
SYNE1-203ENST00000354674 GLIPR1L1Q6UWM5 242 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms