RNA–Protein interactions for RNA: ENST00000354500.6

TRPM3-201, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 1 (best)

Gene TRPM3, Length 4,459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-201ENST00000354500 IQCJQ1A5X6 159 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 SLC24A4Q8NFF2 622 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 PAM16Q9Y3D7 125 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 ZNF785A8K8V0 405 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 C9orf172C9J069 976 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 J3KRW8 73 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 RNF151Q2KHN1 245 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 WBP1Q96G27 269 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 NOL4LQ96MY1 436 aaPredicted RBP10.38□□□□□ -0.75
TRPM3-201ENST00000354500 TECRQ9NZ01 308 aaKnown RBP10.38□□□□□ -0.75
TRPM3-201ENST00000354500 OR51B2Q9Y5P1 312 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 FREM1Q5H8C1 2179 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 A0A1W2PN81 502 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 LOC390937A0A1W2PQ73 354 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 TMEM210A6NLX4 147 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 TCTAP57738 103 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 FAM27E3Q08E93 113 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 CSRP2Q16527 193 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 KIAA1644Q3SXP7 199 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 RAB1CQ92928 201 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 RAB1BQ9H0U4 201 aa10.38□□□□□ -0.75
TRPM3-201ENST00000354500 PLXNA3P51805 1871 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 GBF1Q92538 1859 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 PRR33A8MZF0 331 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 REG1AP05451 166 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 OR2D3Q8NGH3 330 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 MANBALQ9NQG1 85 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 DNASE2O00115 360 aaPredicted RBP10.37□□□□□ -0.75
TRPM3-201ENST00000354500 ARL16Q0P5N6 197 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 RCC1LQ96I51 464 aaKnown RBP10.37□□□□□ -0.75
TRPM3-201ENST00000354500 RALYQ9UKM9 306 aaKnown RBP10.37□□□□□ -0.75
TRPM3-201ENST00000354500 HILPDAQ9Y5L2 63 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 C17orf98A8MV24 154 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 RAB29O14966 203 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 OR2J3O76001 311 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 HPRT1P00492 218 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 SUPT4H1P63272 117 aaKnown RBP10.37□□□□□ -0.75
TRPM3-201ENST00000354500 ADTRPQ96IZ2 230 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 LOC105371267A0A1B0GV96 52 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 CD55P08174 381 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 ACP1P24666 158 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 ZBTB34Q8NCN2 500 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 FAM222BQ8WU58 562 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 SCNM1Q9BWG6 230 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 NPVFQ9HCQ7 196 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 TMEM140Q9NV12 185 aa10.37□□□□□ -0.75
TRPM3-201ENST00000354500 OTOGLQ3ZCN5 2332 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 IGKV1-27A0A075B6S5 117 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 IGHV3-35A0A0C4DH35 117 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 ZNF716A6NP11 495 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 CECR9P0C854 216 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 CCL20P78556 96 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 FXYD3Q14802 87 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 MMDQ15546 238 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 GABRA6Q16445 453 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 KCNMB1Q16558 191 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 LINC00518Q8N0U6 118 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 ZNF645Q8N7E2 425 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 MARVELD3Q96A59 401 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 GALNT14Q96FL9 552 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 SEBOXQ9HB31 216 aaPredicted RBP10.36□□□□□ -0.75
TRPM3-201ENST00000354500 CALYQ9NYX4 217 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 MALRD1Q5VYJ5 2156 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 PPIAL4EA0A075B759 164 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 PPIAL4DF5H284 164 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 SMIM6P0DI80 62 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 PPIAL4FP0DN26 164 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 VAMP3Q15836 100 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 RPEL1Q2QD12 228 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 PDPNQ86YL7 162 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 PKIBQ9C010 78 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 FKBP11Q9NYL4 201 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 PPIAL4AQ9Y536 164 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 E9PLN8 166 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 SLC25A17O43808 307 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 LINC00596Q86U02 117 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 C17orf82Q86X59 251 aaPredicted RBP10.36□□□□□ -0.75
TRPM3-201ENST00000354500 PLPPR1Q8TBJ4 325 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 VN1R17PQ8TDU5 208 aa10.36□□□□□ -0.75
TRPM3-201ENST00000354500 NUDT16L1Q9BRJ7 211 aaKnown RBP10.36□□□□□ -0.75
TRPM3-201ENST00000354500 P2RY6Q15077 328 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 SLC25A53Q5H9E4 307 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 C1orf185Q5T7R7 199 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 OR13A1Q8NGR1 328 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 OR1L8Q8NGR8 309 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 EAF1Q96JC9 268 aaPredicted RBP10.35□□□□□ -0.75
TRPM3-201ENST00000354500 TMUB1Q9BVT8 246 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 MS4A5Q9H3V2 200 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 HOXA6P31267 233 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 OR1L6Q8NGR2 347 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 SIRT7Q9NRC8 400 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 PRNDQ9UKY0 176 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 FAM90A10PA6NDY2 464 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 FAM90A18PA6NE21 464 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 FAM90A16PA6NEW6 464 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 FAM90A20PA6NIJ5 464 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 FAM90A8PA6NJQ4 464 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 LRRC3CA6NJW4 275 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 FAM90A7PA6NKC0 464 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 FAM90A22PA8MWA6 464 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms