RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 SLC38A11Q08AI6 406 aa12.84□□□□□ -0.35
MBD1-205ENST00000353909 ZNF788Q6ZQV5 615 aa12.84□□□□□ -0.35
MBD1-205ENST00000353909 COMMD1Q8N668 190 aa12.84□□□□□ -0.35
MBD1-205ENST00000353909 QTRT1Q9BXR0 403 aaKnown RBP12.84□□□□□ -0.35
MBD1-205ENST00000353909 MSRB2Q9Y3D2 182 aa12.84□□□□□ -0.35
MBD1-205ENST00000353909 SPTBN1Q01082 2364 aaKnown RBP12.84□□□□□ -0.35
MBD1-205ENST00000353909 TRAV3A0A0B4J244 114 aa12.84□□□□□ -0.35
MBD1-205ENST00000353909 KBTBD11-OT1A0A1B0GTJ5 212 aa12.84□□□□□ -0.35
MBD1-205ENST00000353909 C17orf100A8MU93 164 aa12.84□□□□□ -0.35
MBD1-205ENST00000353909 RAB29O14966 203 aa12.84□□□□□ -0.35
MBD1-205ENST00000353909 TNFSF4P23510 183 aa12.84□□□□□ -0.35
MBD1-205ENST00000353909 NHLH1Q02575 133 aa12.84□□□□□ -0.35
MBD1-205ENST00000353909 DTD1Q8TEA8 209 aa12.84□□□□□ -0.35
MBD1-205ENST00000353909 HBG1P69891 147 aa12.83□□□□□ -0.36
MBD1-205ENST00000353909 HBG2P69892 147 aa12.83□□□□□ -0.36
MBD1-205ENST00000353909 ZNF726P1Q15940 193 aa12.83□□□□□ -0.36
MBD1-205ENST00000353909 LRRC75BQ2VPJ9 315 aa12.83□□□□□ -0.36
MBD1-205ENST00000353909 SCGB1C1Q8TD33 95 aa12.83□□□□□ -0.36
MBD1-205ENST00000353909 PMS2P5A8MQ11 134 aa12.83□□□□□ -0.36
MBD1-205ENST00000353909 GFRA3O60609 400 aa12.83□□□□□ -0.36
MBD1-205ENST00000353909 DAOP14920 347 aa12.83□□□□□ -0.36
MBD1-205ENST00000353909 GNG10P50151 68 aa12.83□□□□□ -0.36
MBD1-205ENST00000353909 WDR61Q9GZS3 305 aaKnown RBP12.83□□□□□ -0.36
MBD1-205ENST00000353909 SAA2-SAA4A0A096LPE2 208 aa12.82□□□□□ -0.36
MBD1-205ENST00000353909 TRGV8A0A0C4DH27 118 aa12.82□□□□□ -0.36
MBD1-205ENST00000353909 RBFOX3A6NFN3 312 aa12.82□□□□□ -0.36
MBD1-205ENST00000353909 PPIHO43447 177 aaKnown RBP12.82□□□□□ -0.36
MBD1-205ENST00000353909 SAA2P0DJI9 122 aaPredicted RBP12.82□□□□□ -0.36
MBD1-205ENST00000353909 ELLP55199 621 aaPredicted RBP12.82□□□□□ -0.36
MBD1-205ENST00000353909 RND1Q92730 232 aa12.82□□□□□ -0.36
MBD1-205ENST00000353909 ZNF665Q9H7R5 613 aa12.82□□□□□ -0.36
MBD1-205ENST00000353909 GFOD1Q9NXC2 390 aa12.82□□□□□ -0.36
MBD1-205ENST00000353909 KPTNQ9Y664 436 aa12.82□□□□□ -0.36
MBD1-205ENST00000353909 ITPR1Q14643 2758 aa12.82□□□□□ -0.36
MBD1-205ENST00000353909 HRNRQ86YZ3 2850 aaPredicted RBP12.82□□□□□ -0.36
MBD1-205ENST00000353909 TRGV10A0A0A0MS01 117 aa12.82□□□□□ -0.36
MBD1-205ENST00000353909 FGF8P55075 233 aaPredicted RBP12.82□□□□□ -0.36
MBD1-205ENST00000353909 TLE1Q04724 770 aa12.82□□□□□ -0.36
MBD1-205ENST00000353909 FAM122CQ6P4D5 195 aa12.82□□□□□ -0.36
MBD1-205ENST00000353909 SLC35B3Q9H1N7 401 aa12.82□□□□□ -0.36
MBD1-205ENST00000353909 CEBPZOSA8MTT3 80 aa12.81□□□□□ -0.36
MBD1-205ENST00000353909 IRF2P14316 349 aa12.81□□□□□ -0.36
MBD1-205ENST00000353909 CEBPGP53567 150 aa12.81□□□□□ -0.36
MBD1-205ENST00000353909 HFEQ30201 348 aa12.81□□□□□ -0.36
MBD1-205ENST00000353909 AWAT1Q58HT5 328 aa12.81□□□□□ -0.36
MBD1-205ENST00000353909 LCN15Q6UWW0 184 aa12.81□□□□□ -0.36
MBD1-205ENST00000353909 CD300LFQ8TDQ1 290 aa12.81□□□□□ -0.36
MBD1-205ENST00000353909 CCL17Q92583 94 aa12.81□□□□□ -0.36
MBD1-205ENST00000353909 ZNF251Q9BRH9 671 aa12.81□□□□□ -0.36
MBD1-205ENST00000353909 PBDC1Q9BVG4 233 aa12.81□□□□□ -0.36
MBD1-205ENST00000353909 ASH1LQ9NR48 2969 aaKnown RBP12.81□□□□□ -0.36
MBD1-205ENST00000353909 SNRNP70P08621 437 aaKnown RBP12.81□□□□□ -0.36
MBD1-205ENST00000353909 NDUFB7P17568 137 aa12.81□□□□□ -0.36
MBD1-205ENST00000353909 PRAMEF5Q5TYX0 476 aa12.81□□□□□ -0.36
MBD1-205ENST00000353909 LYG1Q8N1E2 194 aa12.81□□□□□ -0.36
MBD1-205ENST00000353909 TCTEX1D1Q8N7M0 179 aa12.81□□□□□ -0.36
MBD1-205ENST00000353909 LFNGQ8NES3 379 aa12.81□□□□□ -0.36
MBD1-205ENST00000353909 TAF15Q92804 592 aaKnown RBP eCLIP12.81□□□□□ -0.36
MBD1-205ENST00000353909 HPRT1P00492 218 aa12.8□□□□□ -0.36
MBD1-205ENST00000353909 IGKV1D-33P01593 117 aa12.8□□□□□ -0.36
MBD1-205ENST00000353909 IGKV1-33P01594 117 aa12.8□□□□□ -0.36
MBD1-205ENST00000353909 GRNP28799 593 aaKnown RBP12.8□□□□□ -0.36
MBD1-205ENST00000353909 TEX36Q5VZQ5 186 aa12.8□□□□□ -0.36
MBD1-205ENST00000353909 DMRTC2Q8IXT2 367 aaPredicted RBP12.8□□□□□ -0.36
MBD1-205ENST00000353909 DDB2Q92466 427 aa12.8□□□□□ -0.36
MBD1-205ENST00000353909 KIAA1456Q9P272 454 aa12.8□□□□□ -0.36
MBD1-205ENST00000353909 SHISA9B4DS77 424 aa12.8□□□□□ -0.36
MBD1-205ENST00000353909 RXFP4Q8TDU9 374 aa12.8□□□□□ -0.36
MBD1-205ENST00000353909 SAP30LQ9HAJ7 183 aa12.8□□□□□ -0.36
MBD1-205ENST00000353909 RPS10P5Q9NQ39 176 aa12.8□□□□□ -0.36
MBD1-205ENST00000353909 LAMP3Q9UQV4 416 aa12.8□□□□□ -0.36
MBD1-205ENST00000353909 E7EQL1 145 aa12.8□□□□□ -0.36
MBD1-205ENST00000353909 IFNA17P01571 189 aa12.8□□□□□ -0.36
MBD1-205ENST00000353909 TLE4Q04727 773 aa12.8□□□□□ -0.36
MBD1-205ENST00000353909 ICAM4Q14773 271 aa12.8□□□□□ -0.36
MBD1-205ENST00000353909 RCC1LQ96I51 464 aaKnown RBP12.8□□□□□ -0.36
MBD1-205ENST00000353909 CLCC1Q96S66 551 aa12.8□□□□□ -0.36
MBD1-205ENST00000353909 S1PR3Q99500 378 aa12.8□□□□□ -0.36
MBD1-205ENST00000353909 C7orf77A4D0Y5 90 aa12.79□□□□□ -0.36
MBD1-205ENST00000353909 M0R036 132 aa12.79□□□□□ -0.36
MBD1-205ENST00000353909 DEFA4P12838 97 aa12.79□□□□□ -0.36
MBD1-205ENST00000353909 TNFRSF1AP19438 455 aa12.79□□□□□ -0.36
MBD1-205ENST00000353909 TFF3Q07654 80 aa12.79□□□□□ -0.36
MBD1-205ENST00000353909 ZNF439Q8NDP4 499 aa12.79□□□□□ -0.36
MBD1-205ENST00000353909 CLDND2Q8NHS1 167 aa12.79□□□□□ -0.36
MBD1-205ENST00000353909 HMGB3O15347 200 aaKnown RBP12.79□□□□□ -0.36
MBD1-205ENST00000353909 PLAUP00749 431 aa12.79□□□□□ -0.36
MBD1-205ENST00000353909 CCL3L1P16619 93 aa12.79□□□□□ -0.36
MBD1-205ENST00000353909 TMPRSS3P57727 454 aa12.79□□□□□ -0.36
MBD1-205ENST00000353909 RAB2AP61019 212 aa12.79□□□□□ -0.36
MBD1-205ENST00000353909 LYPD2Q6UXB3 125 aa12.79□□□□□ -0.36
MBD1-205ENST00000353909 ZNF383Q8NA42 475 aa12.79□□□□□ -0.36
MBD1-205ENST00000353909 ISOC2Q96AB3 205 aa12.79□□□□□ -0.36
MBD1-205ENST00000353909 PUS1Q9Y606 427 aaKnown RBP eCLIP12.79□□□□□ -0.36
MBD1-205ENST00000353909 A0A1B0GW64 132 aa12.78□□□□□ -0.36
MBD1-205ENST00000353909 C15orf62A8K5M9 175 aa12.78□□□□□ -0.36
MBD1-205ENST00000353909 MYOD1P15172 320 aa12.78□□□□□ -0.36
MBD1-205ENST00000353909 ACSM6Q6P461 480 aa12.78□□□□□ -0.36
MBD1-205ENST00000353909 RPP25LQ8N5L8 163 aaKnown RBP12.78□□□□□ -0.36
MBD1-205ENST00000353909 LINC01560Q8TB33 94 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms