RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ITPR1Q14643 2758 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 PKDREJQ9NTG1 2253 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 IGHV2OR16-5A0A0B4J2B6 119 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 LRRC30A6NM36 301 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 RRHO14718 337 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 SH2D1BO14796 132 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 ZNF737O75373 536 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 CLDN1O95832 211 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 HSPB1P04792 205 aaKnown RBP5.01□□□□□ -1.61
CLCN3-201ENST00000347613 COX5AP20674 150 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 MDH2P40926 338 aaKnown RBP5.01□□□□□ -1.61
CLCN3-201ENST00000347613 RAB5BP61020 215 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 ZNF787Q6DD87 383 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 ZNF474Q6S9Z5 364 aaPredicted RBP5.01□□□□□ -1.61
CLCN3-201ENST00000347613 ZNF114Q8NC26 417 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 NECAP1Q8NC96 275 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 MBD3L1Q8WWY6 194 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 SPIN2AQ99865 258 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 SPIN2BQ9BPZ2 258 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 HIPK2Q9H2X6 1198 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 NIT2Q9NQR4 276 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 ZNF71Q9NQZ8 489 aaPredicted RBP5.01□□□□□ -1.61
CLCN3-201ENST00000347613 METTL1Q9UBP6 276 aaKnown RBP5.01□□□□□ -1.61
CLCN3-201ENST00000347613 WNT2P09544 360 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 BCL2P10415 239 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 NDUFA6P56556 154 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 LOXL3P58215 753 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 SLC38A11Q08AI6 406 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 TCF23Q7RTU1 214 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 GCSAMQ8N6F7 178 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 RNASE11Q8TAA1 199 aaKnown RBP5.01□□□□□ -1.61
CLCN3-201ENST00000347613 FER1L6-AS2Q96M78 137 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 RAB40CQ96S21 281 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 PBDC1Q9BVG4 233 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 GPR61Q9BZJ8 451 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 RIMS4Q9H426 269 aaPredicted RBP5.01□□□□□ -1.61
CLCN3-201ENST00000347613 CDH20Q9HBT6 801 aa5.01□□□□□ -1.61
CLCN3-201ENST00000347613 TRAV38-1A0A0B4J264 116 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 C15orf62A8K5M9 175 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 PRSS44E7EML9 344 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 J3QW42 95 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 FRMD6-AS1P0C7T7 363 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 SLC25A6P12236 298 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 UBE2NP61088 152 aaKnown RBP5□□□□□ -1.61
CLCN3-201ENST00000347613 KIAA0141Q14154 515 aaPredicted RBP5□□□□□ -1.61
CLCN3-201ENST00000347613 PIP4P1Q86T03 277 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 MOB3BQ86TA1 216 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 ZGRF1Q86YA3 2104 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 OR2Z1Q8NG97 314 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 NINJ1Q92982 152 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 GNPNAT1Q96EK6 184 aaPredicted RBP5□□□□□ -1.61
CLCN3-201ENST00000347613 TMEM68Q96MH6 324 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 GGACTQ9BVM4 153 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 SDF2L1Q9HCN8 221 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 ABI3Q9P2A4 366 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 MIOXQ9UGB7 285 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 UTP20O75691 2785 aaKnown RBP5□□□□□ -1.61
CLCN3-201ENST00000347613 DYSFO75923 2080 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 TRAV1-1A0A0B4J248 108 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 A0A1B0GUS0 222 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 CEBPZOSA8MTT3 80 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 AP4M1O00189 453 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 IGLV1-44P01699 117 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 CRYAAP02489 173 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 FTH1P19P0C7X4 201 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 TRGC1P0CF51 173 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 DEFB109BQ30KR1 87 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 STX12Q86Y82 276 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 TCTEX1D2Q8WW35 142 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 GALMQ96C23 342 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 TVP23CQ96ET8 276 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 CISD1Q9NZ45 108 aaKnown RBP5□□□□□ -1.61
CLCN3-201ENST00000347613 DUSP13Q9UII6 198 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 FAM215AQ9Y5M1 114 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 CUBNO60494 3623 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 NAV3Q8IVL0 2385 aa5□□□□□ -1.61
CLCN3-201ENST00000347613 PTPRZ1P23471 2315 aaPredicted RBP5□□□□□ -1.61
CLCN3-201ENST00000347613 MAP1LC3B2A6NCE7 125 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 IGHV2-70P01814 119 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 IFNA4P05014 189 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 HOXA5P20719 270 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 ZNF83P51522 516 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 ZNF674Q2M3X9 581 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 ACSF3Q4G176 576 aaPredicted RBP4.99□□□□□ -1.61
CLCN3-201ENST00000347613 KHDC3LQ587J8 217 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 VHLLQ6RSH7 139 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 ABHD12Q8N2K0 398 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 LRRC29Q8WV35 223 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 COL25A1Q9BXS0 654 aaPredicted RBP4.99□□□□□ -1.61
CLCN3-201ENST00000347613 MAP1LC3BQ9GZQ8 125 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 GAB2Q9UQC2 676 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 APC2O95996 2303 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 TRBV20OR9-2A0A075B6H5 130 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 PRSS46E5RG02 174 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 TIMM8AO60220 97 aaPredicted RBP4.99□□□□□ -1.61
CLCN3-201ENST00000347613 OPN1MWP04001 364 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 FABP1P07148 127 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 OPN1MW2P0DN77 364 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 OPN1MW3P0DN78 364 aa4.99□□□□□ -1.61
CLCN3-201ENST00000347613 MLANAQ16655 118 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms