RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 MYOZ3Q8TDC0 251 aa12.55□□□□□ -0.4
ATG4B-201ENST00000344376 BORCS5Q969J3 196 aa12.55□□□□□ -0.4
ATG4B-201ENST00000344376 UBE2E2Q96LR5 201 aa12.55□□□□□ -0.4
ATG4B-201ENST00000344376 HARBI1Q96MB7 349 aa12.55□□□□□ -0.4
ATG4B-201ENST00000344376 ANXA10Q9UJ72 324 aa12.55□□□□□ -0.4
ATG4B-201ENST00000344376 SHOXO15266 292 aa12.54□□□□□ -0.4
ATG4B-201ENST00000344376 SLC22A5O76082 557 aa12.54□□□□□ -0.4
ATG4B-201ENST00000344376 CD40LGP29965 261 aa12.54□□□□□ -0.4
ATG4B-201ENST00000344376 TGFBR1P36897 503 aa12.54□□□□□ -0.4
ATG4B-201ENST00000344376 ARPC4P59998 168 aa12.54□□□□□ -0.4
ATG4B-201ENST00000344376 PYHIN1Q6K0P9 492 aa12.54□□□□□ -0.4
ATG4B-201ENST00000344376 BVESQ8NE79 360 aa12.54□□□□□ -0.4
ATG4B-201ENST00000344376 OR5M8Q8NGP6 311 aa12.54□□□□□ -0.4
ATG4B-201ENST00000344376 S100ZQ8WXG8 99 aa12.54□□□□□ -0.4
ATG4B-201ENST00000344376 ARPC1AQ92747 370 aa12.54□□□□□ -0.4
ATG4B-201ENST00000344376 KLK15Q9H2R5 256 aa12.54□□□□□ -0.4
ATG4B-201ENST00000344376 CCDC59Q9P031 241 aaKnown RBP12.54□□□□□ -0.4
ATG4B-201ENST00000344376 OR2W1Q9Y3N9 320 aa12.54□□□□□ -0.4
ATG4B-201ENST00000344376 SSX5O60225 188 aa12.53□□□□□ -0.4
ATG4B-201ENST00000344376 NFYAP23511 347 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-201ENST00000344376 RAB9AP51151 201 aa12.53□□□□□ -0.4
ATG4B-201ENST00000344376 VBP1P61758 197 aa12.53□□□□□ -0.4
ATG4B-201ENST00000344376 LSM3P62310 102 aaKnown RBP12.53□□□□□ -0.4
ATG4B-201ENST00000344376 TMEM177Q53S58 311 aa12.53□□□□□ -0.4
ATG4B-201ENST00000344376 ACTBL2Q562R1 376 aa12.53□□□□□ -0.4
ATG4B-201ENST00000344376 UNQ5815/PRO19632Q6UWF5 114 aa12.53□□□□□ -0.4
ATG4B-201ENST00000344376 ZNF645Q8N7E2 425 aa12.53□□□□□ -0.4
ATG4B-201ENST00000344376 ZNF491Q8N8L2 437 aa12.53□□□□□ -0.4
ATG4B-201ENST00000344376 C5orf30Q96GV9 206 aa12.53□□□□□ -0.4
ATG4B-201ENST00000344376 ZMAT5Q9UDW3 170 aaKnown RBP12.53□□□□□ -0.4
ATG4B-201ENST00000344376 FBXO7Q9Y3I1 522 aa12.53□□□□□ -0.4
ATG4B-201ENST00000344376 J3QRK9 145 aa12.52□□□□□ -0.4
ATG4B-201ENST00000344376 CNIH1O95406 144 aa12.52□□□□□ -0.4
ATG4B-201ENST00000344376 DUTP33316 252 aaKnown RBP12.52□□□□□ -0.4
ATG4B-201ENST00000344376 NCS1P62166 190 aa12.52□□□□□ -0.4
ATG4B-201ENST00000344376 FXYD3Q14802 87 aa12.52□□□□□ -0.4
ATG4B-201ENST00000344376 AKIRIN2Q53H80 203 aa12.52□□□□□ -0.4
ATG4B-201ENST00000344376 C19orf54Q5BKX5 351 aa12.52□□□□□ -0.4
ATG4B-201ENST00000344376 BEST4Q8NFU0 473 aa12.52□□□□□ -0.4
ATG4B-201ENST00000344376 OR11H1Q8NG94 326 aa12.52□□□□□ -0.4
ATG4B-201ENST00000344376 GRPEL2Q8TAA5 225 aa12.52□□□□□ -0.4
ATG4B-201ENST00000344376 S100A16Q96FQ6 103 aaKnown RBP12.52□□□□□ -0.4
ATG4B-201ENST00000344376 FAM103A1Q9BTL3 118 aaKnown RBP12.52□□□□□ -0.4
ATG4B-201ENST00000344376 AUNIPQ9H7T9 357 aa12.52□□□□□ -0.4
ATG4B-201ENST00000344376 TPSG1Q9NRR2 321 aa12.52□□□□□ -0.4
ATG4B-201ENST00000344376 NUBP2Q9Y5Y2 271 aa12.52□□□□□ -0.4
ATG4B-201ENST00000344376 PRKDCP78527 4128 aaKnown RBP12.52□□□□□ -0.41
ATG4B-201ENST00000344376 HLA-DQB1P01920 261 aa12.52□□□□□ -0.41
ATG4B-201ENST00000344376 OR8U8P0C7N1 319 aa12.52□□□□□ -0.41
ATG4B-201ENST00000344376 HOXD3P31249 432 aaPredicted RBP12.52□□□□□ -0.41
ATG4B-201ENST00000344376 CBX5P45973 191 aa12.52□□□□□ -0.41
ATG4B-201ENST00000344376 GNB1P62873 340 aa12.52□□□□□ -0.41
ATG4B-201ENST00000344376 RUNX1Q01196 453 aa12.52□□□□□ -0.41
ATG4B-201ENST00000344376 VMA21Q3ZAQ7 101 aa12.52□□□□□ -0.41
ATG4B-201ENST00000344376 UBE2NLQ5JXB2 153 aa12.52□□□□□ -0.41
ATG4B-201ENST00000344376 LFNGQ8NES3 379 aa12.52□□□□□ -0.41
ATG4B-201ENST00000344376 WDR12Q9GZL7 423 aaKnown RBP12.52□□□□□ -0.41
ATG4B-201ENST00000344376 GNB4Q9HAV0 340 aa12.52□□□□□ -0.41
ATG4B-201ENST00000344376 PRELID3BQ9Y3B1 194 aa12.52□□□□□ -0.41
ATG4B-201ENST00000344376 CRYZL1O95825 349 aa12.51□□□□□ -0.41
ATG4B-201ENST00000344376 IGLV2-23P01705 113 aa12.51□□□□□ -0.41
ATG4B-201ENST00000344376 EGR2P11161 476 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-201ENST00000344376 RPS19P39019 145 aaKnown RBP12.51□□□□□ -0.41
ATG4B-201ENST00000344376 EGFEM1PQ0D2K5 195 aa12.51□□□□□ -0.41
ATG4B-201ENST00000344376 FHL3Q13643 280 aa12.51□□□□□ -0.41
ATG4B-201ENST00000344376 KCTD9Q7L273 389 aa12.51□□□□□ -0.41
ATG4B-201ENST00000344376 HOGA1Q86XE5 327 aa12.51□□□□□ -0.41
ATG4B-201ENST00000344376 OR1N2Q8NGR9 330 aa12.51□□□□□ -0.41
ATG4B-201ENST00000344376 OSR1Q8TAX0 266 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-201ENST00000344376 DDB2Q92466 427 aa12.51□□□□□ -0.41
ATG4B-201ENST00000344376 OR5B12Q96R08 314 aa12.51□□□□□ -0.41
ATG4B-201ENST00000344376 SLIRPQ9GZT3 109 aaKnown RBP12.51□□□□□ -0.41
ATG4B-201ENST00000344376 MRPS7Q9Y2R9 242 aaKnown RBP12.51□□□□□ -0.41
ATG4B-201ENST00000344376 RBMX2Q9Y388 322 aaKnown RBP12.51□□□□□ -0.41
ATG4B-201ENST00000344376 TGP01266 2768 aa12.5□□□□□ -0.41
ATG4B-201ENST00000344376 XRCC3O43542 346 aa12.5□□□□□ -0.41
ATG4B-201ENST00000344376 SOX15O60248 233 aa12.5□□□□□ -0.41
ATG4B-201ENST00000344376 TUSC2O75896 110 aa12.5□□□□□ -0.41
ATG4B-201ENST00000344376 ZNF616Q08AN1 781 aa12.5□□□□□ -0.41
ATG4B-201ENST00000344376 KIAA0141Q14154 515 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-201ENST00000344376 ZNF846Q147U1 533 aa12.5□□□□□ -0.41
ATG4B-201ENST00000344376 SAMD12Q8N8I0 201 aa12.5□□□□□ -0.41
ATG4B-201ENST00000344376 KCTD12Q96CX2 325 aaKnown RBP12.5□□□□□ -0.41
ATG4B-201ENST00000344376 NXF2Q9GZY0 626 aaKnown RBP12.5□□□□□ -0.41
ATG4B-201ENST00000344376 SLA2Q9H6Q3 261 aa12.5□□□□□ -0.41
ATG4B-201ENST00000344376 LINC00473A8K010 186 aa12.49□□□□□ -0.41
ATG4B-201ENST00000344376 I3L521 148 aa12.49□□□□□ -0.41
ATG4B-201ENST00000344376 CREBL2O60519 120 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-201ENST00000344376 CRYGBP07316 175 aa12.49□□□□□ -0.41
ATG4B-201ENST00000344376 UBE2KP61086 200 aa12.49□□□□□ -0.41
ATG4B-201ENST00000344376 C9orf66Q5T8R8 295 aa12.49□□□□□ -0.41
ATG4B-201ENST00000344376 Q6ZNX1 250 aa12.49□□□□□ -0.41
ATG4B-201ENST00000344376 GVQW1Q8N7I0 195 aa12.49□□□□□ -0.41
ATG4B-201ENST00000344376 TEX45Q8NA69 505 aa12.49□□□□□ -0.41
ATG4B-201ENST00000344376 SLC25A46Q96AG3 418 aa12.49□□□□□ -0.41
ATG4B-201ENST00000344376 TMEM68Q96MH6 324 aa12.49□□□□□ -0.41
ATG4B-201ENST00000344376 HSD17B10Q99714 261 aaKnown RBP12.49□□□□□ -0.41
ATG4B-201ENST00000344376 IFT46Q9NQC8 304 aa12.49□□□□□ -0.41
ATG4B-201ENST00000344376 DNAH3Q8TD57 4116 aa12.49□□□□□ -0.41
ATG4B-201ENST00000344376 IGKV1D-13A0A0B4J2D9 117 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms