RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 EDARADDQ8WWZ3 215 aa12.36□□□□□ -0.43
VIPAS39-202ENST00000343765 PKDREJQ9NTG1 2253 aa12.36□□□□□ -0.43
VIPAS39-202ENST00000343765 C5orf52A6NGY3 159 aa12.36□□□□□ -0.43
VIPAS39-202ENST00000343765 MGST3O14880 152 aa12.36□□□□□ -0.43
VIPAS39-202ENST00000343765 IFNA4P05014 189 aa12.36□□□□□ -0.43
VIPAS39-202ENST00000343765 NQO2P16083 231 aa12.36□□□□□ -0.43
VIPAS39-202ENST00000343765 ZNF134P52741 427 aa12.36□□□□□ -0.43
VIPAS39-202ENST00000343765 Q8WTZ3 238 aa12.36□□□□□ -0.43
VIPAS39-202ENST00000343765 PINX1Q96BK5 328 aaKnown RBP12.36□□□□□ -0.43
VIPAS39-202ENST00000343765 YPEL4Q96NS1 127 aa12.36□□□□□ -0.43
VIPAS39-202ENST00000343765 HIPK2Q9H2X6 1198 aa12.36□□□□□ -0.43
VIPAS39-202ENST00000343765 SLC31A2O15432 143 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 CXCL1P09341 107 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 GZMHP20718 246 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 FFAR4Q5NUL3 377 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 PRAMEF5Q5TYX0 476 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 HEPN1Q6WQI6 88 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 CA5BP1Q8WTZ4 195 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 SNX22Q96L94 193 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 TACC2O95359 2948 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 TGIF2-C20orf24A0A0A6YYL0 155 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 A0A1B0GWJ7 208 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 PMS2P5A8MQ11 134 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 ERVFRD-1P60508 538 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 ZNF674Q2M3X9 581 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 TRAT1Q6PIZ9 186 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 IGF2-ASQ6U949 168 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 Q6ZS92 163 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 ZGRF1Q86YA3 2104 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 RBMXL3Q8N7X1 1067 aaKnown RBP12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 PPP1R35Q8TAP8 253 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 MRPL37Q9BZE1 423 aaKnown RBP12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 LAMP3Q9UQV4 416 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 GLRXP35754 106 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 MEOX2P50222 304 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 SLC35E3Q7Z769 313 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 FAM169BQ8N8A8 192 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 OR10G4Q8NGN3 311 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 OR10G9Q8NGN4 311 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 OR10G7Q8NGN6 311 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 Q8TCH9 128 aa12.35□□□□□ -0.43
VIPAS39-202ENST00000343765 CYB5R3P00387 301 aaPredicted RBP12.34□□□□□ -0.43
VIPAS39-202ENST00000343765 ELOBQ15370 118 aa12.34□□□□□ -0.43
VIPAS39-202ENST00000343765 IGFL3Q6UXB1 125 aa12.34□□□□□ -0.43
VIPAS39-202ENST00000343765 C1orf174Q8IYL3 243 aa12.34□□□□□ -0.43
VIPAS39-202ENST00000343765 GATAD1Q8WUU5 269 aa12.34□□□□□ -0.43
VIPAS39-202ENST00000343765 CIB3Q96Q77 187 aaPredicted RBP12.34□□□□□ -0.43
VIPAS39-202ENST00000343765 PARD6GQ9BYG4 376 aaPredicted RBP12.34□□□□□ -0.43
VIPAS39-202ENST00000343765 CALYQ9NYX4 217 aa12.34□□□□□ -0.43
VIPAS39-202ENST00000343765 VAX2Q9UIW0 290 aa12.34□□□□□ -0.43
VIPAS39-202ENST00000343765 JPT1Q9UK76 154 aa12.34□□□□□ -0.43
VIPAS39-202ENST00000343765 SMCO3A2RU48 225 aa12.34□□□□□ -0.43
VIPAS39-202ENST00000343765 NKX6-1P78426 367 aaPredicted RBP12.34□□□□□ -0.43
VIPAS39-202ENST00000343765 MRGPRGQ86SM5 289 aa12.34□□□□□ -0.43
VIPAS39-202ENST00000343765 TCTEX1D1Q8N7M0 179 aa12.34□□□□□ -0.43
VIPAS39-202ENST00000343765 ZNF709Q8N972 641 aa12.34□□□□□ -0.43
VIPAS39-202ENST00000343765 NPCDR1Q9BY65 106 aa12.34□□□□□ -0.43
VIPAS39-202ENST00000343765 TRAV3A0A0B4J244 114 aa12.33□□□□□ -0.44
VIPAS39-202ENST00000343765 IFNA1P01562 189 aa12.33□□□□□ -0.44
VIPAS39-202ENST00000343765 LOXL3P58215 753 aa12.33□□□□□ -0.44
VIPAS39-202ENST00000343765 TCF15Q12870 199 aa12.33□□□□□ -0.44
VIPAS39-202ENST00000343765 SLC16A13Q7RTY0 426 aa12.33□□□□□ -0.44
VIPAS39-202ENST00000343765 TGIF2LYQ8IUE0 185 aa12.33□□□□□ -0.44
VIPAS39-202ENST00000343765 OR4A16Q8NH70 328 aa12.33□□□□□ -0.44
VIPAS39-202ENST00000343765 IFI27L2Q9H2X8 130 aa12.33□□□□□ -0.44
VIPAS39-202ENST00000343765 SH3BGRL2Q9UJC5 107 aa12.33□□□□□ -0.44
VIPAS39-202ENST00000343765 LRBAP50851 2863 aa12.33□□□□□ -0.44
VIPAS39-202ENST00000343765 TLN1Q9Y490 2541 aaKnown RBP12.33□□□□□ -0.44
VIPAS39-202ENST00000343765 A0A087WWC5 75 aa12.33□□□□□ -0.44
VIPAS39-202ENST00000343765 C15orf62A8K5M9 175 aa12.33□□□□□ -0.44
VIPAS39-202ENST00000343765 UBE2CO00762 179 aa12.33□□□□□ -0.44
VIPAS39-202ENST00000343765 ATP6V1FQ16864 119 aa12.33□□□□□ -0.44
VIPAS39-202ENST00000343765 C1orf229Q6ZS94 237 aaPredicted RBP12.33□□□□□ -0.44
VIPAS39-202ENST00000343765 OR6C3Q9NZP0 311 aa12.33□□□□□ -0.44
VIPAS39-202ENST00000343765 TIMM9Q9Y5J7 89 aa12.33□□□□□ -0.44
VIPAS39-202ENST00000343765 IFNA10P01566 189 aa12.32□□□□□ -0.44
VIPAS39-202ENST00000343765 EIF2S3P41091 472 aaKnown RBP12.32□□□□□ -0.44
VIPAS39-202ENST00000343765 NCMAPQ5T1S8 102 aa12.32□□□□□ -0.44
VIPAS39-202ENST00000343765 FAM90A1Q86YD7 464 aa12.32□□□□□ -0.44
VIPAS39-202ENST00000343765 RPUSD4Q96CM3 377 aaKnown RBP12.32□□□□□ -0.44
VIPAS39-202ENST00000343765 MALSU1Q96EH3 234 aa12.32□□□□□ -0.44
VIPAS39-202ENST00000343765 DCAF16Q9NXF7 216 aa12.32□□□□□ -0.44
VIPAS39-202ENST00000343765 SPTA1P02549 2419 aa12.32□□□□□ -0.44
VIPAS39-202ENST00000343765 CYB5BO43169 146 aa12.32□□□□□ -0.44
VIPAS39-202ENST00000343765 YPEL1O60688 119 aa12.32□□□□□ -0.44
VIPAS39-202ENST00000343765 HPRT1P00492 218 aa12.32□□□□□ -0.44
VIPAS39-202ENST00000343765 TNFAIP6P98066 277 aaPredicted RBP12.32□□□□□ -0.44
VIPAS39-202ENST00000343765 YPEL2Q96QA6 119 aa12.32□□□□□ -0.44
VIPAS39-202ENST00000343765 S1PR3Q99500 378 aa12.32□□□□□ -0.44
VIPAS39-202ENST00000343765 HCFC1P51610 2035 aa12.32□□□□□ -0.44
VIPAS39-202ENST00000343765 DSCAMO60469 2012 aa12.32□□□□□ -0.44
VIPAS39-202ENST00000343765 GNG10P50151 68 aa12.31□□□□□ -0.44
VIPAS39-202ENST00000343765 CD81P60033 236 aa12.31□□□□□ -0.44
VIPAS39-202ENST00000343765 ERVK-16P61578 105 aa12.31□□□□□ -0.44
VIPAS39-202ENST00000343765 PAX5Q02548 391 aa12.31□□□□□ -0.44
VIPAS39-202ENST00000343765 KIAA0141Q14154 515 aaPredicted RBP12.31□□□□□ -0.44
VIPAS39-202ENST00000343765 GCSAMLQ5JQS6 135 aa12.31□□□□□ -0.44
VIPAS39-202ENST00000343765 SSX3Q99909 188 aa12.31□□□□□ -0.44
VIPAS39-202ENST00000343765 GCM1Q9NP62 436 aa12.31□□□□□ -0.44
VIPAS39-202ENST00000343765 HEYLQ9NQ87 328 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms