RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 A0A1B0GU03 582 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 TCAPO15273 167 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 PTBP3O95758 552 aaKnown RBP10.57□□□□□ -0.72
LMX1A-202ENST00000342310 IGHV1-2P23083 117 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 GATA2P23769 480 aaPredicted RBP10.57□□□□□ -0.72
LMX1A-202ENST00000342310 ZNF324BQ6AW86 544 aaPredicted RBP10.57□□□□□ -0.72
LMX1A-202ENST00000342310 WDR86Q86TI4 376 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 RPP25LQ8N5L8 163 aaKnown RBP10.57□□□□□ -0.72
LMX1A-202ENST00000342310 MUCL1Q96DR8 90 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 MALSU1Q96EH3 234 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 TECTBQ96PL2 329 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 ZNRD1Q9P1U0 126 aa10.57□□□□□ -0.72
LMX1A-202ENST00000342310 IGHV3-21A0A0B4J1V1 117 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 A0A1W2PNU3 283 aaPredicted RBP10.56□□□□□ -0.72
LMX1A-202ENST00000342310 GRIFINA4D1Z8 144 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 C10orf142B7Z368 130 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 C11orf94C9JXX5 98 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 MGST1P10620 155 aaKnown RBP10.56□□□□□ -0.72
LMX1A-202ENST00000342310 COX5AP20674 150 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 TNFRSF9Q07011 255 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 P2RY6Q15077 328 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 MIC13Q5XKP0 118 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 MISP3Q96FF7 219 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 DERL1Q9BUN8 251 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 B4E171 279 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 TSPAN7P41732 249 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 CCL8P80075 99 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 DMRTC2Q8IXT2 367 aaPredicted RBP10.56□□□□□ -0.72
LMX1A-202ENST00000342310 ZNF525Q8N782 197 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 R3HDM4Q96D70 268 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 SAMD10Q9BYL1 202 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 DMRT1Q9Y5R6 373 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 SETD2Q9BYW2 2564 aaPredicted RBP10.56□□□□□ -0.72
LMX1A-202ENST00000342310 FAM208BQ5VWN6 2430 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 DOPEY2Q9Y3R5 2298 aa10.56□□□□□ -0.72
LMX1A-202ENST00000342310 ZNF729A6NN14 1252 aaPredicted RBP10.55□□□□□ -0.72
LMX1A-202ENST00000342310 IGHV2-70P01814 119 aa10.55□□□□□ -0.72
LMX1A-202ENST00000342310 TRIP6Q15654 476 aaKnown RBP10.55□□□□□ -0.72
LMX1A-202ENST00000342310 ZNF718Q3SXZ3 478 aa10.55□□□□□ -0.72
LMX1A-202ENST00000342310 ACSM6Q6P461 480 aa10.55□□□□□ -0.72
LMX1A-202ENST00000342310 H1FOOQ8IZA3 346 aaPredicted RBP10.55□□□□□ -0.72
LMX1A-202ENST00000342310 QTRT1Q9BXR0 403 aaKnown RBP10.55□□□□□ -0.72
LMX1A-202ENST00000342310 PLEKHA3Q9HB20 300 aa10.55□□□□□ -0.72
LMX1A-202ENST00000342310 OR7C2O60412 319 aa10.55□□□□□ -0.72
LMX1A-202ENST00000342310 SMPD2O60906 423 aa10.55□□□□□ -0.72
LMX1A-202ENST00000342310 MEF2BQ02080 365 aaPredicted RBP10.55□□□□□ -0.72
LMX1A-202ENST00000342310 RNF138Q8WVD3 245 aa10.55□□□□□ -0.72
LMX1A-202ENST00000342310 ACTR3CQ9C0K3 210 aaPredicted RBP10.55□□□□□ -0.72
LMX1A-202ENST00000342310 PARLQ9H300 379 aa10.55□□□□□ -0.72
LMX1A-202ENST00000342310 RNF212BA8MTL3 300 aa10.55□□□□□ -0.72
LMX1A-202ENST00000342310 CDC34P49427 236 aaPredicted RBP10.55□□□□□ -0.72
LMX1A-202ENST00000342310 VAX2Q9UIW0 290 aa10.55□□□□□ -0.72
LMX1A-202ENST00000342310 CPAMD8Q8IZJ3 1885 aa10.55□□□□□ -0.72
LMX1A-202ENST00000342310 NCKAP5O14513 1909 aa10.55□□□□□ -0.72
LMX1A-202ENST00000342310 MARCH11A6NNE9 402 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 IGKV1D-33P01593 117 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 IGKV1-33P01594 117 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 OR10J4P0C629 311 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 ZNF25P17030 456 aaPredicted RBP10.54□□□□□ -0.72
LMX1A-202ENST00000342310 ATP5G3P48201 142 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 ZNF585BQ52M93 769 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 FOXL2NBQ6ZUU3 175 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 ACY3Q96HD9 319 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 GUCD1Q96NT3 240 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 ENSAO43768 121 aaKnown RBP10.54□□□□□ -0.72
LMX1A-202ENST00000342310 CLDN14O95500 239 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 PLAUP00749 431 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 PRSS8Q16651 343 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 C10orf91Q5T1B1 145 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 PRR27Q6MZM9 219 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 TOMM20LQ6UXN7 152 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 LRTM2Q8N967 370 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 NHLRC2Q8NBF2 726 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 C14orf144Q96I85 54 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 SH2D2AQ9NP31 389 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 PAM16Q9Y3D7 125 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 PTPRQQ9UMZ3 2332 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 ZNF726P1Q15940 193 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 TCF23Q7RTU1 214 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 OR10A7Q8NGE5 316 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 SNIP1Q8TAD8 396 aaKnown RBP10.54□□□□□ -0.72
LMX1A-202ENST00000342310 ABHD5Q8WTS1 349 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 S1PR3Q99500 378 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 WDR61Q9GZS3 305 aaKnown RBP10.54□□□□□ -0.72
LMX1A-202ENST00000342310 HIPK2Q9H2X6 1198 aa10.54□□□□□ -0.72
LMX1A-202ENST00000342310 SMG1Q96Q15 3661 aaKnown RBP10.54□□□□□ -0.72
LMX1A-202ENST00000342310 TRAV3A0A0B4J244 114 aa10.53□□□□□ -0.72
LMX1A-202ENST00000342310 LOC102723971A0A1B0GUV8 181 aa10.53□□□□□ -0.72
LMX1A-202ENST00000342310 FAM157AC9JC47 383 aa10.53□□□□□ -0.72
LMX1A-202ENST00000342310 WFDC8Q8IUA0 241 aa10.53□□□□□ -0.72
LMX1A-202ENST00000342310 FAM216AQ8WUB2 273 aa10.53□□□□□ -0.72
LMX1A-202ENST00000342310 ZNF71Q9NQZ8 489 aaPredicted RBP10.53□□□□□ -0.72
LMX1A-202ENST00000342310 LINC00473A8K010 186 aa10.53□□□□□ -0.72
LMX1A-202ENST00000342310 CECR9P0C854 216 aa10.53□□□□□ -0.72
LMX1A-202ENST00000342310 SMIM21Q3B7S5 101 aa10.53□□□□□ -0.72
LMX1A-202ENST00000342310 FAM214BQ7L5A3 538 aa10.53□□□□□ -0.72
LMX1A-202ENST00000342310 HAPLN4Q86UW8 402 aa10.53□□□□□ -0.72
LMX1A-202ENST00000342310 BCL2L2Q92843 193 aaPredicted RBP10.53□□□□□ -0.72
LMX1A-202ENST00000342310 IMMP2LQ96T52 175 aa10.53□□□□□ -0.72
LMX1A-202ENST00000342310 IL36GQ9NZH8 169 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms