RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 MORN3Q6PF18 240 aaPredicted RBP3.07□□□□□ -1.92
SYNE1-201ENST00000341594 NEIL2Q969S2 332 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 NRG2O14511 850 aaPredicted RBP3.07□□□□□ -1.92
SYNE1-201ENST00000341594 C8orf46Q8TAG6 207 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 NKX2-6A6NCS4 301 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 HOGA1Q86XE5 327 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 MRPL16Q9NX20 251 aaKnown RBP3.07□□□□□ -1.92
SYNE1-201ENST00000341594 LTBQ06643 244 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 OR4C11Q6IEV9 310 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 TMEM150AQ86TG1 271 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 RDH5Q92781 318 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 SCRT1Q9BWW7 348 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 CCL26Q9Y258 94 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 NCBP2LA6PVI3 153 aaKnown RBP3.07□□□□□ -1.92
SYNE1-201ENST00000341594 FAM157AC9JC47 383 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 SUB1P53999 127 aaKnown RBP eCLIP3.07□□□□□ -1.92
SYNE1-201ENST00000341594 NPC2P61916 151 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 SPANXN5Q5MJ07 72 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 MORN4Q8NDC4 146 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 NKX6-3A6NJ46 265 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 DDAH2O95865 285 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 ZAR1Q86SH2 424 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 ZNF732B4DXR9 585 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 OCIAD2Q56VL3 154 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 OR9G1Q8NH87 305 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 MS4A4EQ96PG1 132 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 A0A1W2PP11 408 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 J3KT08 172 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 HLA-DQA1P01909 254 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 CCL7P80098 99 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 RPS19BP1Q86WX3 136 aaKnown RBP3.07□□□□□ -1.92
SYNE1-201ENST00000341594 C17orf47Q8NEP4 570 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 MISP3Q96FF7 219 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 CRYM-AS1A6NIL9 109 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 MSTNO14793 375 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 GYPAP02724 150 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 PPP1CBP62140 327 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 TCF23Q7RTU1 214 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 KLKB1P03952 638 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 ERCC8Q13216 396 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 ZPLD1Q8TCW7 415 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 KLHDC3Q9BQ90 382 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 MS4A8Q9BY19 250 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 MUC22E2RYF6 1773 aaPredicted RBP3.07□□□□□ -1.92
SYNE1-201ENST00000341594 CT45A10P0DMU9 189 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 CCL11P51671 97 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 OR1L4Q8NGR5 311 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 SPINK8P0C7L1 97 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 MEOX1P50221 254 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 C11orf40Q8WZ69 217 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 CAPNS2Q96L46 248 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 CXorf36Q9H7Y0 433 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 A0A1W2PR48 441 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 ZNF418Q8TF45 676 aaPredicted RBP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 RTN4IP1Q8WWV3 396 aaPredicted RBP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 SH3BGRL3Q9H299 93 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 IL36GQ9NZH8 169 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 OR9G9P0C7N8 305 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 LY6DQ14210 128 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 RBPMS2Q6ZRY4 209 aaKnown RBP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 S1PR3Q99500 378 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 NICN1Q9BSH3 213 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 PARLQ9H300 379 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 SETD2Q9BYW2 2564 aaPredicted RBP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 ZNF43P17038 809 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 Q0VG73 95 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 LINC00303Q3SY05 128 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 TPTE2P1Q5T6R2 138 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 SMIM7Q9BQ49 75 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 A0A1W2PP55 124 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 RPL12P30050 165 aaKnown RBP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 PARS2Q7L3T8 475 aaKnown RBP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 LSM10Q969L4 123 aaKnown RBP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 TRAV36DV7A0A075B6V5 113 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 A8MZ25 164 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 KIR2DS3Q14952 304 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 OR1K1Q8NGR3 316 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 PDFQ9HBH1 243 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 MRPL27Q9P0M9 148 aaKnown RBP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 UFC1Q9Y3C8 167 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 MBD3L5A6NJ08 208 aaPredicted RBP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 BLVRBP30043 206 aaPredicted RBP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 RPS15AP62244 130 aaKnown RBP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 CD300LBA8K4G0 201 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 ZNF85Q03923 595 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 GABRG3Q99928 467 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 CLDND1Q9NY35 253 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 LAMTOR3Q9UHA4 124 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 DUSP13Q9UII6 198 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 TNFSF14O43557 240 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 IL21Q9HBE4 155 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 Q9N2K0 584 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 IGHV3-72A0A0B4J1Y9 119 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 OR5AN1Q8NGI8 311 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 OR4S2Q8NH73 311 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 HRASLS2Q9NWW9 162 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 NPSP0C0P6 89 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 KIR2DL2P43627 348 aaPredicted RBP3.06□□□□□ -1.92
SYNE1-201ENST00000341594 TMEM258P61165 79 aa3.06□□□□□ -1.92
SYNE1-201ENST00000341594 S1PR5Q9H228 398 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms