RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 CTXN2P0C2S0 81 aa15.64■□□□□ 0.09
SYNE2-201ENST00000341472 SNRPBP14678 240 aaKnown RBP15.64■□□□□ 0.09
SYNE2-201ENST00000341472 PITPNAQ00169 270 aa15.64■□□□□ 0.09
SYNE2-201ENST00000341472 CBX3Q13185 183 aa15.64■□□□□ 0.09
SYNE2-201ENST00000341472 DCTN2Q13561 401 aaKnown RBP15.64■□□□□ 0.09
SYNE2-201ENST00000341472 PYHIN1Q6K0P9 492 aa15.64■□□□□ 0.09
SYNE2-201ENST00000341472 SFXN4Q6P4A7 337 aa15.64■□□□□ 0.09
SYNE2-201ENST00000341472 H1FOOQ8IZA3 346 aaPredicted RBP15.64■□□□□ 0.09
SYNE2-201ENST00000341472 MS4A10Q96PG2 267 aa15.64■□□□□ 0.09
SYNE2-201ENST00000341472 DCSTAMPQ9H295 470 aa15.64■□□□□ 0.09
SYNE2-201ENST00000341472 RRASP10301 218 aa15.63■□□□□ 0.09
SYNE2-201ENST00000341472 ECI1P42126 302 aa15.63■□□□□ 0.09
SYNE2-201ENST00000341472 VBP1P61758 197 aa15.63■□□□□ 0.09
SYNE2-201ENST00000341472 RTL8BQ17RB0 113 aa15.63■□□□□ 0.09
SYNE2-201ENST00000341472 ZNF260Q3ZCT1 412 aa15.63■□□□□ 0.09
SYNE2-201ENST00000341472 ASPHD1Q5U4P2 390 aa15.63■□□□□ 0.09
SYNE2-201ENST00000341472 BVESQ8NE79 360 aa15.63■□□□□ 0.09
SYNE2-201ENST00000341472 ARPC1AQ92747 370 aa15.63■□□□□ 0.09
SYNE2-201ENST00000341472 ADTRPQ96IZ2 230 aa15.63■□□□□ 0.09
SYNE2-201ENST00000341472 SHOXO15266 292 aa15.62■□□□□ 0.09
SYNE2-201ENST00000341472 CLEC2LP0C7M8 214 aa15.62■□□□□ 0.09
SYNE2-201ENST00000341472 NCS1P62166 190 aa15.62■□□□□ 0.09
SYNE2-201ENST00000341472 MXD1Q05195 221 aa15.62■□□□□ 0.09
SYNE2-201ENST00000341472 TMEM177Q53S58 311 aa15.62■□□□□ 0.09
SYNE2-201ENST00000341472 GRPEL2Q8TAA5 225 aa15.62■□□□□ 0.09
SYNE2-201ENST00000341472 ALX4Q9H161 411 aaPredicted RBP15.62■□□□□ 0.09
SYNE2-201ENST00000341472 RNF167Q9H6Y7 350 aa15.62■□□□□ 0.09
SYNE2-201ENST00000341472 TPSG1Q9NRR2 321 aa15.62■□□□□ 0.09
SYNE2-201ENST00000341472 H3BMQ9 156 aa15.61■□□□□ 0.09
SYNE2-201ENST00000341472 J3QRK9 145 aa15.61■□□□□ 0.09
SYNE2-201ENST00000341472 ARPC1BO15143 372 aaKnown RBP15.61■□□□□ 0.09
SYNE2-201ENST00000341472 IGLV2-23P01705 113 aa15.61■□□□□ 0.09
SYNE2-201ENST00000341472 CRYGBP07316 175 aa15.61■□□□□ 0.09
SYNE2-201ENST00000341472 INSL3P51460 131 aa15.61■□□□□ 0.09
SYNE2-201ENST00000341472 GNG2P59768 71 aa15.61■□□□□ 0.09
SYNE2-201ENST00000341472 PJVKQ0ZLH3 352 aa15.61■□□□□ 0.09
SYNE2-201ENST00000341472 LGALS14Q8TCE9 139 aa15.61■□□□□ 0.09
SYNE2-201ENST00000341472 DCUN1D4Q92564 292 aa15.61■□□□□ 0.09
SYNE2-201ENST00000341472 C5orf30Q96GV9 206 aa15.61■□□□□ 0.09
SYNE2-201ENST00000341472 HARBI1Q96MB7 349 aa15.61■□□□□ 0.09
SYNE2-201ENST00000341472 SLA2Q9H6Q3 261 aa15.61■□□□□ 0.09
SYNE2-201ENST00000341472 ZNF355PQ9NSJ1 428 aa15.61■□□□□ 0.09
SYNE2-201ENST00000341472 TMEM235A6NFC5 223 aa15.6■□□□□ 0.09
SYNE2-201ENST00000341472 SRRM4A7MD48 611 aaKnown RBP15.6■□□□□ 0.09
SYNE2-201ENST00000341472 LINC01619G3V211 115 aa15.6■□□□□ 0.09
SYNE2-201ENST00000341472 TMEM127O75204 238 aa15.6■□□□□ 0.09
SYNE2-201ENST00000341472 LGALS1P09382 135 aaKnown RBP15.6■□□□□ 0.09
SYNE2-201ENST00000341472 DUTP33316 252 aaKnown RBP15.6■□□□□ 0.09
SYNE2-201ENST00000341472 TPPP2P59282 170 aa15.6■□□□□ 0.09
SYNE2-201ENST00000341472 CD69Q07108 199 aa15.6■□□□□ 0.09
SYNE2-201ENST00000341472 IDNKQ5T6J7 187 aa15.6■□□□□ 0.09
SYNE2-201ENST00000341472 CNIH2Q6PI25 160 aa15.6■□□□□ 0.09
SYNE2-201ENST00000341472 CROCCP3Q8IVE0 287 aa15.6■□□□□ 0.09
SYNE2-201ENST00000341472 OR5T1Q8NG75 326 aa15.6■□□□□ 0.09
SYNE2-201ENST00000341472 NUDCD2Q8WVJ2 157 aa15.6■□□□□ 0.09
SYNE2-201ENST00000341472 RHOVQ96L33 236 aa15.6■□□□□ 0.09
SYNE2-201ENST00000341472 RHBDL2Q9NX52 303 aa15.6■□□□□ 0.09
SYNE2-201ENST00000341472 DNAH9Q9NYC9 4486 aa15.59■□□□□ 0.09
SYNE2-201ENST00000341472 OVOL1O14753 267 aa15.59■□□□□ 0.09
SYNE2-201ENST00000341472 IGHV3-11P01762 117 aa15.59■□□□□ 0.09
SYNE2-201ENST00000341472 TRGV3P03979 118 aa15.59■□□□□ 0.09
SYNE2-201ENST00000341472 HSPB1P04792 205 aaKnown RBP15.59■□□□□ 0.09
SYNE2-201ENST00000341472 NFYAP23511 347 aaPredicted RBP15.59■□□□□ 0.09
SYNE2-201ENST00000341472 SCAND1P57086 179 aa15.59■□□□□ 0.09
SYNE2-201ENST00000341472 DLX4Q92988 240 aaPredicted RBP15.59■□□□□ 0.09
SYNE2-201ENST00000341472 TMEM68Q96MH6 324 aa15.59■□□□□ 0.09
SYNE2-201ENST00000341472 B9D2Q9BPU9 175 aa15.59■□□□□ 0.09
SYNE2-201ENST00000341472 OR2W1Q9Y3N9 320 aa15.59■□□□□ 0.09
SYNE2-201ENST00000341472 ETV7Q9Y603 341 aa15.59■□□□□ 0.09
SYNE2-201ENST00000341472 TRAV18A0A075B6X5 111 aa15.58■□□□□ 0.08
SYNE2-201ENST00000341472 SLC22A5O76082 557 aa15.58■□□□□ 0.08
SYNE2-201ENST00000341472 HLA-DQB1P01920 261 aa15.58■□□□□ 0.08
SYNE2-201ENST00000341472 RPS19P39019 145 aaKnown RBP15.58■□□□□ 0.08
SYNE2-201ENST00000341472 VMA21Q3ZAQ7 101 aa15.58■□□□□ 0.08
SYNE2-201ENST00000341472 ZNF429Q86V71 674 aa15.58■□□□□ 0.08
SYNE2-201ENST00000341472 TEX45Q8NA69 505 aa15.58■□□□□ 0.08
SYNE2-201ENST00000341472 POC5Q8NA72 575 aa15.58■□□□□ 0.08
SYNE2-201ENST00000341472 OR5H6Q8NGV6 325 aa15.58■□□□□ 0.08
SYNE2-201ENST00000341472 DDB2Q92466 427 aa15.58■□□□□ 0.08
SYNE2-201ENST00000341472 PRR25Q96S07 402 aa15.58■□□□□ 0.08
SYNE2-201ENST00000341472 IGHV4OR15-8A0A075B7B6 117 aa15.57■□□□□ 0.08
SYNE2-201ENST00000341472 A0A087WW49 117 aa15.57■□□□□ 0.08
SYNE2-201ENST00000341472 LINC00473A8K010 186 aa15.57■□□□□ 0.08
SYNE2-201ENST00000341472 SSX5O60225 188 aa15.57■□□□□ 0.08
SYNE2-201ENST00000341472 CRYZL1O95825 349 aa15.57■□□□□ 0.08
SYNE2-201ENST00000341472 TGFBR1P36897 503 aa15.57■□□□□ 0.08
SYNE2-201ENST00000341472 SLURP1P55000 103 aa15.57■□□□□ 0.08
SYNE2-201ENST00000341472 UBE2KP61086 200 aa15.57■□□□□ 0.08
SYNE2-201ENST00000341472 SSBP2P81877 361 aaPredicted RBP15.57■□□□□ 0.08
SYNE2-201ENST00000341472 SPCS2Q15005 226 aa15.57■□□□□ 0.08
SYNE2-201ENST00000341472 VAX1Q5SQQ9 334 aa15.57■□□□□ 0.08
SYNE2-201ENST00000341472 ZNF645Q8N7E2 425 aa15.57■□□□□ 0.08
SYNE2-201ENST00000341472 DCUN1D5Q9BTE7 237 aa15.57■□□□□ 0.08
SYNE2-201ENST00000341472 ANXA10Q9UJ72 324 aa15.57■□□□□ 0.08
SYNE2-201ENST00000341472 H3BUA1 57 aa15.56■□□□□ 0.08
SYNE2-201ENST00000341472 TUSC2O75896 110 aa15.56■□□□□ 0.08
SYNE2-201ENST00000341472 RORCP51449 518 aa15.56■□□□□ 0.08
SYNE2-201ENST00000341472 OSR1Q8TAX0 266 aaPredicted RBP15.56■□□□□ 0.08
SYNE2-201ENST00000341472 SLC25A46Q96AG3 418 aa15.56■□□□□ 0.08
SYNE2-201ENST00000341472 DIABLOQ9NR28 239 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms